RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 SYNDIG1Q9H7V2 258 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 PLGRKTQ9HBL7 147 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 RUVBL1Q9Y265 456 aaKnown RBP10.74□□□□□ -0.69
COL27A1-204ENST00000477421 KLHL20Q9Y2M5 609 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 H3BNX3 289 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 B4GAT1O43505 415 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 TGM5O43548 720 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 ERN1O75460 977 aaKnown RBP10.74□□□□□ -0.69
COL27A1-204ENST00000477421 KLK1P06870 262 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 OR1E2P47887 323 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 RPL34P49207 117 aaKnown RBP10.74□□□□□ -0.69
COL27A1-204ENST00000477421 MAPK12P53778 367 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 SEC13P55735 322 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 PCBP2Q15366 365 aaKnown RBP eCLIP10.74□□□□□ -0.69
COL27A1-204ENST00000477421 LEMD2Q8NC56 503 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 GPR26Q8NDV2 337 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 TOP1MTQ969P6 601 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 EGLN2Q96KS0 407 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 YIPF4Q9BSR8 244 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 NUAK2Q9H093 628 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 MUC13Q9H3R2 512 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 POPDC3Q9HBV1 291 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 HMG20AQ9NP66 347 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 FBXO10Q9UK96 956 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 ITM2BQ9Y287 266 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 BRWD3Q6RI45 1802 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 TTC34A8MYJ7 566 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 C1QAP02745 245 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 PRNPP04156 253 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 RPN2P04844 631 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 EBLN1P0CF75 366 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 ZNF182P17025 639 aaPredicted RBP10.74□□□□□ -0.69
COL27A1-204ENST00000477421 PRPS1L1P21108 318 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 CTGFP29279 349 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 SEPHS1P49903 392 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 ZNF140P52738 457 aaPredicted RBP10.74□□□□□ -0.69
COL27A1-204ENST00000477421 CREMQ03060 361 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 KCNAB2Q13303 367 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 IER5LQ5T953 404 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 ANXA8L1Q5VT79 327 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 KANK2Q63ZY3 851 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 ENPP6Q6UWR7 440 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 MARVELD2Q8N4S9 558 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 PRICKLE1Q96MT3 831 aaPredicted RBP10.74□□□□□ -0.69
COL27A1-204ENST00000477421 MARCH5Q9NX47 278 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 UBAP1Q9NZ09 502 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 VAPAQ9P0L0 249 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 ATXN10Q9UBB4 475 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 PAIP2BQ9ULR5 123 aaKnown RBP10.74□□□□□ -0.69
COL27A1-204ENST00000477421 FZD4Q9ULV1 537 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 CDC14AQ9UNH5 594 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 ENTPD4Q9Y227 616 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 PRSS21Q9Y6M0 314 aa10.74□□□□□ -0.69
COL27A1-204ENST00000477421 TRIP12Q14669 1992 aaPredicted RBP10.73□□□□□ -0.69
COL27A1-204ENST00000477421 MROH6A6NGR9 719 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 WASH4PA8MWX3 477 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 POP7O75817 140 aaKnown RBP10.73□□□□□ -0.69
COL27A1-204ENST00000477421 GSRP00390 522 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 ACRV1P26436 265 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 RFX4Q33E94 735 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 DGKKQ5KSL6 1271 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 C9orf64Q5T6V5 341 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 ARMC6Q6NXE6 501 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 MINDY1Q8N5J2 469 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 WBP2Q969T9 261 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 C12orf43Q96C57 262 aaKnown RBP10.73□□□□□ -0.69
COL27A1-204ENST00000477421 HSPBAP1Q96EW2 488 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 TPT1P8Q9HAU6 139 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 TOR4AQ9NXH8 423 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 ANGPT4Q9Y264 503 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 ASB3Q9Y575 518 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 M0QX08 132 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 ZNF195O14628 629 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 ACP5P13686 325 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 PSMD7P51665 324 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 CCR3P51677 355 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 CDC42P60953 191 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 RPS13P62277 151 aaKnown RBP10.73□□□□□ -0.69
COL27A1-204ENST00000477421 CRTC1Q6UUV9 634 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 DTWD1Q8N5C7 304 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 IRF7Q92985 503 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 UBE2E3Q969T4 207 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 IL17FQ96PD4 163 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 CCDC3Q9BQI4 270 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 ELAC1Q9H777 363 aaKnown RBP10.73□□□□□ -0.69
COL27A1-204ENST00000477421 RPF2Q9H7B2 306 aaKnown RBP10.73□□□□□ -0.69
COL27A1-204ENST00000477421 SEC14L3Q9UDX4 400 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 SBK3P0C264 359 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 PABPC4LP0CB38 370 aaKnown RBP10.73□□□□□ -0.69
COL27A1-204ENST00000477421 SRSF11Q05519 484 aaKnown RBP10.73□□□□□ -0.69
COL27A1-204ENST00000477421 MGAT3Q09327 533 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 TMEM115Q12893 351 aaPredicted RBP10.73□□□□□ -0.69
COL27A1-204ENST00000477421 C1DQ13901 141 aaKnown RBP10.73□□□□□ -0.69
COL27A1-204ENST00000477421 HMGN2P46Q86SG4 172 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 KRT73Q86Y46 540 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 C10orf53Q8N6V4 93 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 WFDC5Q8TCV5 224 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 POF1BQ8WVV4 589 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 TEX37Q96LM6 180 aa10.73□□□□□ -0.69
COL27A1-204ENST00000477421 KCNC2Q96PR1 638 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms