RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 TAC3Q9UHF0 121 aa15.31■□□□□ 0.04
COPS3-207ENST00000477299 SATB2Q9UPW6 733 aa15.31■□□□□ 0.04
COPS3-207ENST00000477299 IGKV1-8A0A0C4DH67 115 aa15.3■□□□□ 0.04
COPS3-207ENST00000477299 TLCD2A6NGC4 264 aa15.3■□□□□ 0.04
COPS3-207ENST00000477299 SUPT3HB4E1H0 165 aa15.3■□□□□ 0.04
COPS3-207ENST00000477299 MAP2K7O14733 419 aa15.3■□□□□ 0.04
COPS3-207ENST00000477299 SUPT3HO75486 399 aa15.3■□□□□ 0.04
COPS3-207ENST00000477299 FGF3P11487 239 aaPredicted RBP15.3■□□□□ 0.04
COPS3-207ENST00000477299 MAGP20916 626 aa15.3■□□□□ 0.04
COPS3-207ENST00000477299 AGTR2P50052 363 aa15.3■□□□□ 0.04
COPS3-207ENST00000477299 KIR2DS3Q14952 304 aa15.3■□□□□ 0.04
COPS3-207ENST00000477299 ARHGAP19Q14CB8 494 aa15.3■□□□□ 0.04
COPS3-207ENST00000477299 ACAP2Q15057 778 aa15.3■□□□□ 0.04
COPS3-207ENST00000477299 CLPPQ16740 277 aaPredicted RBP15.3■□□□□ 0.04
COPS3-207ENST00000477299 C3orf38Q5JPI3 329 aa15.3■□□□□ 0.04
COPS3-207ENST00000477299 FCRL6Q6DN72 434 aa15.3■□□□□ 0.04
COPS3-207ENST00000477299 RAB11FIP2Q7L804 512 aa15.3■□□□□ 0.04
COPS3-207ENST00000477299 PRSS42Q7Z5A4 293 aa15.3■□□□□ 0.04
COPS3-207ENST00000477299 CACTIN-AS1Q8N1I8 211 aa15.3■□□□□ 0.04
COPS3-207ENST00000477299 GALNT15Q8N3T1 639 aa15.3■□□□□ 0.04
COPS3-207ENST00000477299 STAG3L4Q8TBR4 150 aa15.3■□□□□ 0.04
COPS3-207ENST00000477299 KLHL6Q8WZ60 621 aa15.3■□□□□ 0.04
COPS3-207ENST00000477299 DPYSL5Q9BPU6 564 aa15.3■□□□□ 0.04
COPS3-207ENST00000477299 TRIM54Q9BYV2 358 aa15.3■□□□□ 0.04
COPS3-207ENST00000477299 PITPNM3Q9BZ71 974 aa15.3■□□□□ 0.04
COPS3-207ENST00000477299 SYNPO2LQ9H987 977 aa15.3■□□□□ 0.04
COPS3-207ENST00000477299 PPCSQ9HAB8 311 aa15.3■□□□□ 0.04
COPS3-207ENST00000477299 APMAPQ9HDC9 416 aa15.3■□□□□ 0.04
COPS3-207ENST00000477299 SLC6A20Q9NP91 592 aa15.3■□□□□ 0.04
COPS3-207ENST00000477299 ACSS2Q9NR19 701 aa15.3■□□□□ 0.04
COPS3-207ENST00000477299 CUEDC1Q9NWM3 386 aaPredicted RBP15.3■□□□□ 0.04
COPS3-207ENST00000477299 CD274Q9NZQ7 290 aa15.3■□□□□ 0.04
COPS3-207ENST00000477299 EMCNQ9ULC0 261 aa15.3■□□□□ 0.04
COPS3-207ENST00000477299 EFCAB7A8K855 629 aa15.29■□□□□ 0.04
COPS3-207ENST00000477299 TK2O00142 265 aa15.29■□□□□ 0.04
COPS3-207ENST00000477299 KDM1AO60341 852 aa15.29■□□□□ 0.04
COPS3-207ENST00000477299 KERAO60938 352 aa15.29■□□□□ 0.04
COPS3-207ENST00000477299 SPAG7O75391 227 aa15.29■□□□□ 0.04
COPS3-207ENST00000477299 ANXA5P08758 320 aa15.29■□□□□ 0.04
COPS3-207ENST00000477299 EBLN1P0CF75 366 aa15.29■□□□□ 0.04
COPS3-207ENST00000477299 COL6A2P12110 1019 aa15.29■□□□□ 0.04
COPS3-207ENST00000477299 FOLR1P15328 257 aa15.29■□□□□ 0.04
COPS3-207ENST00000477299 NPPBP16860 134 aa15.29■□□□□ 0.04
COPS3-207ENST00000477299 KRT4P19013 534 aa15.29■□□□□ 0.04
COPS3-207ENST00000477299 RPA3P35244 121 aaPredicted RBP15.29■□□□□ 0.04
COPS3-207ENST00000477299 HSPA7P48741 367 aa15.29■□□□□ 0.04
COPS3-207ENST00000477299 AP1S2P56377 157 aa15.29■□□□□ 0.04
COPS3-207ENST00000477299 SLC5A12Q1EHB4 618 aa15.29■□□□□ 0.04
COPS3-207ENST00000477299 PTCHD3Q3KNS1 767 aa15.29■□□□□ 0.04
COPS3-207ENST00000477299 SRRM1Q8IYB3 904 aaKnown RBP15.29■□□□□ 0.04
COPS3-207ENST00000477299 OR2L3Q8NG85 312 aa15.29■□□□□ 0.04
COPS3-207ENST00000477299 OR56A3Q8NH54 315 aa15.29■□□□□ 0.04
COPS3-207ENST00000477299 MOCOSQ96EN8 888 aa15.29■□□□□ 0.04
COPS3-207ENST00000477299 LIN37Q96GY3 246 aaPredicted RBP15.29■□□□□ 0.04
COPS3-207ENST00000477299 SLC41A2Q96JW4 573 aa15.29■□□□□ 0.04
COPS3-207ENST00000477299 CTRCQ99895 268 aa15.29■□□□□ 0.04
COPS3-207ENST00000477299 SGPP1Q9BX95 441 aa15.29■□□□□ 0.04
COPS3-207ENST00000477299 RAB11FIP5Q9BXF6 653 aa15.29■□□□□ 0.04
COPS3-207ENST00000477299 CENPHQ9H3R5 247 aa15.29■□□□□ 0.04
COPS3-207ENST00000477299 ZNF768Q9H5H4 540 aaKnown RBP15.29■□□□□ 0.04
COPS3-207ENST00000477299 C1GALT1Q9NS00 363 aa15.29■□□□□ 0.04
COPS3-207ENST00000477299 XPR1Q9UBH6 696 aa15.29■□□□□ 0.04
COPS3-207ENST00000477299 PTBP2Q9UKA9 531 aaKnown RBP15.29■□□□□ 0.04
COPS3-207ENST00000477299 LOXL2Q9Y4K0 774 aa15.29■□□□□ 0.04
COPS3-207ENST00000477299 WDFY3Q8IZQ1 3526 aa15.28■□□□□ 0.04
COPS3-207ENST00000477299 UQCRHLA0A096LP55 91 aa15.28■□□□□ 0.04
COPS3-207ENST00000477299 A0A0J9YY10 115 aa15.28■□□□□ 0.04
COPS3-207ENST00000477299 TRABD2BA6NFA1 517 aa15.28■□□□□ 0.04
COPS3-207ENST00000477299 TARM1B6A8C7 271 aa15.28■□□□□ 0.04
COPS3-207ENST00000477299 AGPSO00116 658 aa15.28■□□□□ 0.04
COPS3-207ENST00000477299 UQCRHP07919 91 aa15.28■□□□□ 0.04
COPS3-207ENST00000477299 ANKRD34CP0C6C1 535 aa15.28■□□□□ 0.04
COPS3-207ENST00000477299 NELFEP18615 380 aaKnown RBP15.28■□□□□ 0.04
COPS3-207ENST00000477299 SLC6A12P48065 614 aa15.28■□□□□ 0.04
COPS3-207ENST00000477299 CDKL1Q00532 357 aa15.28■□□□□ 0.04
COPS3-207ENST00000477299 SLC18A2Q05940 514 aa15.28■□□□□ 0.04
COPS3-207ENST00000477299 TRA2AQ13595 282 aaKnown RBP eCLIP15.28■□□□□ 0.04
COPS3-207ENST00000477299 GPR19Q15760 415 aa15.28■□□□□ 0.04
COPS3-207ENST00000477299 DEFB110Q30KQ9 67 aa15.28■□□□□ 0.04
COPS3-207ENST00000477299 THEMIS2Q5TEJ8 643 aa15.28■□□□□ 0.04
COPS3-207ENST00000477299 FAM219BQ5XKK7 198 aa15.28■□□□□ 0.04
COPS3-207ENST00000477299 ICE2Q659A1 982 aa15.28■□□□□ 0.04
COPS3-207ENST00000477299 FIGLAQ6QHK4 219 aa15.28■□□□□ 0.04
COPS3-207ENST00000477299 LRIG3Q6UXM1 1119 aa15.28■□□□□ 0.04
COPS3-207ENST00000477299 CCDC91Q7Z6B0 441 aa15.28■□□□□ 0.04
COPS3-207ENST00000477299 THOC6Q86W42 341 aaKnown RBP15.28■□□□□ 0.04
COPS3-207ENST00000477299 FBXO39Q8N4B4 442 aa15.28■□□□□ 0.04
COPS3-207ENST00000477299 RAB42Q8N4Z0 105 aa15.28■□□□□ 0.04
COPS3-207ENST00000477299 BMPERQ8N8U9 685 aa15.28■□□□□ 0.04
COPS3-207ENST00000477299 RHEBL1Q8TAI7 183 aa15.28■□□□□ 0.04
COPS3-207ENST00000477299 ACMSDQ8TDX5 336 aa15.28■□□□□ 0.04
COPS3-207ENST00000477299 FCRL4Q96PJ5 515 aa15.28■□□□□ 0.04
COPS3-207ENST00000477299 CCDC177Q9NQR7 707 aaPredicted RBP15.28■□□□□ 0.04
COPS3-207ENST00000477299 SIDT1Q9NXL6 827 aaKnown RBP15.28■□□□□ 0.04
COPS3-207ENST00000477299 PISDQ9UG56 409 aa15.28■□□□□ 0.04
COPS3-207ENST00000477299 SLC22A14Q9Y267 594 aa15.28■□□□□ 0.04
COPS3-207ENST00000477299 PCDHB11Q9Y5F2 797 aa15.28■□□□□ 0.04
COPS3-207ENST00000477299 NCOR2Q9Y618 2525 aa15.28■□□□□ 0.04
COPS3-207ENST00000477299 SDK2Q58EX2 2172 aa15.28■□□□□ 0.04
COPS3-207ENST00000477299 CCDC187A0A096LP49 1063 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms