RNA–Protein interactions for RNA: ENST00000476183.2

LIME1-204, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5

Gene LIME1, Length 809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-204ENST00000476183 INTS7Q9NVH2 962 aaKnown RBP20.33■□□□□ 0.85
LIME1-204ENST00000476183 KLK4Q9Y5K2 254 aa20.33■□□□□ 0.85
LIME1-204ENST00000476183 KCNMB2Q9Y691 235 aa20.33■□□□□ 0.85
LIME1-204ENST00000476183 AP1M2Q9Y6Q5 423 aa20.33■□□□□ 0.85
LIME1-204ENST00000476183 E7ESA3 106 aa20.32■□□□□ 0.84
LIME1-204ENST00000476183 GFYI3L273 518 aa20.32■□□□□ 0.84
LIME1-204ENST00000476183 RAD51CO43502 376 aa20.32■□□□□ 0.84
LIME1-204ENST00000476183 CTSVO60911 334 aa20.32■□□□□ 0.84
LIME1-204ENST00000476183 FKBP9O95302 570 aa20.32■□□□□ 0.84
LIME1-204ENST00000476183 HBQ1P09105 142 aa20.32■□□□□ 0.84
LIME1-204ENST00000476183 RAB40ALP0C0E4 278 aa20.32■□□□□ 0.84
LIME1-204ENST00000476183 MCM3P25205 808 aa20.32■□□□□ 0.84
LIME1-204ENST00000476183 GCGRP47871 477 aa20.32■□□□□ 0.84
LIME1-204ENST00000476183 NFATC3Q12968 1075 aa20.32■□□□□ 0.84
LIME1-204ENST00000476183 KCNAB2Q13303 367 aa20.32■□□□□ 0.84
LIME1-204ENST00000476183 UGT8Q16880 541 aa20.32■□□□□ 0.84
LIME1-204ENST00000476183 C1orf189Q5VU69 101 aa20.32■□□□□ 0.84
LIME1-204ENST00000476183 RHBDD2Q6NTF9 364 aa20.32■□□□□ 0.84
LIME1-204ENST00000476183 SUSD1Q6UWL2 747 aa20.32■□□□□ 0.84
LIME1-204ENST00000476183 GALNT7Q86SF2 657 aa20.32■□□□□ 0.84
LIME1-204ENST00000476183 SYVN1Q86TM6 617 aa20.32■□□□□ 0.84
LIME1-204ENST00000476183 FBXO15Q8NCQ5 510 aaPredicted RBP20.32■□□□□ 0.84
LIME1-204ENST00000476183 APOBEC4Q8WW27 367 aaKnown RBP20.32■□□□□ 0.84
LIME1-204ENST00000476183 GBP5Q96PP8 586 aa20.32■□□□□ 0.84
LIME1-204ENST00000476183 NLNQ9BYT8 704 aa20.32■□□□□ 0.84
LIME1-204ENST00000476183 PPANQ9NQ55 473 aaKnown RBP20.32■□□□□ 0.84
LIME1-204ENST00000476183 DHCR7Q9UBM7 475 aaKnown RBP20.32■□□□□ 0.84
LIME1-204ENST00000476183 TRMT6Q9UJA5 497 aaKnown RBP20.32■□□□□ 0.84
LIME1-204ENST00000476183 POLHQ9Y253 713 aa20.32■□□□□ 0.84
LIME1-204ENST00000476183 CCDC88CQ9P219 2028 aa20.32■□□□□ 0.84
LIME1-204ENST00000476183 HEATR5BQ9P2D3 2071 aa20.31■□□□□ 0.84
LIME1-204ENST00000476183 FAM187AA6NFU0 413 aa20.31■□□□□ 0.84
LIME1-204ENST00000476183 TARM1B6A8C7 271 aa20.31■□□□□ 0.84
LIME1-204ENST00000476183 SLC16A8O95907 504 aa20.31■□□□□ 0.84
LIME1-204ENST00000476183 PGGT1BP53609 377 aa20.31■□□□□ 0.84
LIME1-204ENST00000476183 PDIA2Q13087 525 aaKnown RBP20.31■□□□□ 0.84
LIME1-204ENST00000476183 TLDC1Q6P9B6 456 aa20.31■□□□□ 0.84
LIME1-204ENST00000476183 PPFIBP2Q8ND30 876 aa20.31■□□□□ 0.84
LIME1-204ENST00000476183 FBXO36Q8NEA4 188 aa20.31■□□□□ 0.84
LIME1-204ENST00000476183 GABPB2Q8TAK5 448 aaPredicted RBP20.31■□□□□ 0.84
LIME1-204ENST00000476183 ZNF480Q8WV37 535 aa20.31■□□□□ 0.84
LIME1-204ENST00000476183 EEF1AKMT1Q8WVE0 214 aa20.31■□□□□ 0.84
LIME1-204ENST00000476183 SMPDL3AQ92484 453 aa20.31■□□□□ 0.84
LIME1-204ENST00000476183 DLG3Q92796 817 aa20.31■□□□□ 0.84
LIME1-204ENST00000476183 ZUFSPQ96AP4 578 aa20.31■□□□□ 0.84
LIME1-204ENST00000476183 DPH2Q9BQC3 489 aaPredicted RBP20.31■□□□□ 0.84
LIME1-204ENST00000476183 ERP44Q9BS26 406 aa20.31■□□□□ 0.84
LIME1-204ENST00000476183 ACAT2Q9BWD1 397 aa20.31■□□□□ 0.84
LIME1-204ENST00000476183 DPH5Q9H2P9 285 aa20.31■□□□□ 0.84
LIME1-204ENST00000476183 IRAK4Q9NWZ3 460 aa20.31■□□□□ 0.84
LIME1-204ENST00000476183 MED13Q9UHV7 2174 aa20.31■□□□□ 0.84
LIME1-204ENST00000476183 ANKRD12Q6UB98 2062 aa20.3■□□□□ 0.84
LIME1-204ENST00000476183 B8ZZF3 427 aa20.3■□□□□ 0.84
LIME1-204ENST00000476183 EIF3FO00303 357 aaPredicted RBP20.3■□□□□ 0.84
LIME1-204ENST00000476183 SFTPCP11686 197 aa20.3■□□□□ 0.84
LIME1-204ENST00000476183 PNLIPRP1P54315 467 aa20.3■□□□□ 0.84
LIME1-204ENST00000476183 CBLBQ13191 982 aa20.3■□□□□ 0.84
LIME1-204ENST00000476183 FRG1Q14331 258 aaKnown RBP20.3■□□□□ 0.84
LIME1-204ENST00000476183 ARHGAP19Q14CB8 494 aa20.3■□□□□ 0.84
LIME1-204ENST00000476183 NCF4Q15080 339 aa20.3■□□□□ 0.84
LIME1-204ENST00000476183 PAQR3Q6TCH7 311 aa20.3■□□□□ 0.84
LIME1-204ENST00000476183 ZNF285Q96NJ3 590 aa20.3■□□□□ 0.84
LIME1-204ENST00000476183 SLC25A18Q9H1K4 315 aa20.3■□□□□ 0.84
LIME1-204ENST00000476183 SLC6A20Q9NP91 592 aa20.3■□□□□ 0.84
LIME1-204ENST00000476183 TAS2R13Q9NYV9 303 aa20.3■□□□□ 0.84
LIME1-204ENST00000476183 TUBD1Q9UJT1 453 aa20.3■□□□□ 0.84
LIME1-204ENST00000476183 TCFL5Q9UL49 500 aa20.3■□□□□ 0.84
LIME1-204ENST00000476183 E7ENX8 843 aa20.29■□□□□ 0.84
LIME1-204ENST00000476183 SYF2O95926 243 aaKnown RBP20.29■□□□□ 0.84
LIME1-204ENST00000476183 ATXN8OSP0DMR3 200 aa20.29■□□□□ 0.84
LIME1-204ENST00000476183 AGXTP21549 392 aa20.29■□□□□ 0.84
LIME1-204ENST00000476183 SKIV2L2P42285 1042 aaKnown RBP20.29■□□□□ 0.84
LIME1-204ENST00000476183 TAP2Q03519 686 aa20.29■□□□□ 0.84
LIME1-204ENST00000476183 ZC3H12BQ5HYM0 836 aaKnown RBP20.29■□□□□ 0.84
LIME1-204ENST00000476183 UGT3A1Q6NUS8 523 aa20.29■□□□□ 0.84
LIME1-204ENST00000476183 UBE2R2Q712K3 238 aaPredicted RBP20.29■□□□□ 0.84
LIME1-204ENST00000476183 ZNF605Q86T29 641 aa20.29■□□□□ 0.84
LIME1-204ENST00000476183 LRRC56Q8IYG6 542 aaPredicted RBP20.29■□□□□ 0.84
LIME1-204ENST00000476183 PROKR1Q8TCW9 393 aa20.29■□□□□ 0.84
LIME1-204ENST00000476183 ADAMTS17Q8TE56 1095 aa20.29■□□□□ 0.84
LIME1-204ENST00000476183 FAM117AQ9C073 453 aa20.29■□□□□ 0.84
LIME1-204ENST00000476183 GRHL1Q9NZI5 618 aa20.29■□□□□ 0.84
LIME1-204ENST00000476183 WHRNQ9P202 907 aa20.29■□□□□ 0.84
LIME1-204ENST00000476183 ADAMTS6Q9UKP5 1117 aa20.29■□□□□ 0.84
LIME1-204ENST00000476183 SNX7Q9UNH6 387 aa20.29■□□□□ 0.84
LIME1-204ENST00000476183 SRPK3Q9UPE1 567 aa20.29■□□□□ 0.84
LIME1-204ENST00000476183 MAN2B2Q9Y2E5 1009 aa20.29■□□□□ 0.84
LIME1-204ENST00000476183 PSAT1Q9Y617 370 aa20.29■□□□□ 0.84
LIME1-204ENST00000476183 IGKV1-8A0A0C4DH67 115 aa20.28■□□□□ 0.84
LIME1-204ENST00000476183 OR2A25A4D2G3 310 aa20.28■□□□□ 0.84
LIME1-204ENST00000476183 ZBTB14O43829 449 aa20.28■□□□□ 0.84
LIME1-204ENST00000476183 PLA2G2AP14555 144 aa20.28■□□□□ 0.84
LIME1-204ENST00000476183 ITGAXP20702 1163 aa20.28■□□□□ 0.84
LIME1-204ENST00000476183 CMPK1P30085 196 aa20.28■□□□□ 0.84
LIME1-204ENST00000476183 RPA3P35244 121 aaPredicted RBP20.28■□□□□ 0.84
LIME1-204ENST00000476183 HSD17B2P37059 387 aa20.28■□□□□ 0.84
LIME1-204ENST00000476183 TSTA3Q13630 321 aaPredicted RBP20.28■□□□□ 0.84
LIME1-204ENST00000476183 HECTD2Q5U5R9 776 aa20.28■□□□□ 0.84
LIME1-204ENST00000476183 DUPD1Q68J44 220 aa20.28■□□□□ 0.84
LIME1-204ENST00000476183 FRMPD2BQ6IN97 320 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms