RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 GPR107Q5VW38 600 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 LIPNQ5VXI9 398 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 GPR139Q6DWJ6 353 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 SLC25A24Q6NUK1 477 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 SLC27A4Q6P1M0 643 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 TTC33Q6PID6 262 aaPredicted RBP5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 UNQ6494/PRO21346Q6UXR6 183 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 GPR155Q7Z3F1 870 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 CAMKMTQ7Z624 323 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 TFAP2DQ7Z6R9 452 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 RTN4RL1Q86UN2 441 aaPredicted RBP5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 METTL23Q86XA0 190 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 LYSMD2Q8IV50 215 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 MCEMP1Q8IX19 187 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 UBQLNLQ8IYU4 475 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 ENTHD1Q8IYW4 607 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 TCTE3Q8IZS6 198 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 METTL4Q8N3J2 472 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 TRAM1L1Q8N609 369 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 EMC1Q8N766 993 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 NAXEQ8NCW5 288 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 HIPK4Q8NE63 616 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 OR1M1Q8NGA1 313 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 OR13C3Q8NGS6 347 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 OR10T2Q8NGX3 314 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 AKR7LQ8NHP1 331 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 ZSCAN18Q8TBC5 510 aaPredicted RBP5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 NANPQ8TBE9 248 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 ASB15Q8WXK1 588 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 MAP4K1Q92918 833 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 HDAC10Q969S8 669 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 PPWD1Q96BP3 646 aaKnown RBP5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 FOXRED1Q96CU9 486 aaPredicted RBP5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 MS4A14Q96JA4 679 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 ST6GAL2Q96JF0 529 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 ZNF668Q96K58 619 aaPredicted RBP5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 PPM1MQ96MI6 270 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 RBM4BQ9BQ04 359 aaKnown RBP5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 THTPAQ9BU02 230 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 MED18Q9BUE0 208 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 EDEM2Q9BV94 578 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 RBM4Q9BWF3 364 aaKnown RBP5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 NFKBIZQ9BYH8 718 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 ANKRD60Q9BZ19 345 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 OPN3Q9H1Y3 402 aaPredicted RBP5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 C7orf69Q9H7B7 122 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 CATSPERBQ9H7T0 1116 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 CERS4Q9HA82 394 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 TLR9Q9NR96 1032 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 SNX15Q9NRS6 342 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 ZDHHC18Q9NUE0 388 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 ERAP1Q9NZ08 941 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 COQ3Q9NZJ6 369 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 PPP4R1LQ9P1A2 415 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 GRHPRQ9UBQ7 328 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 MGAT4AQ9UM21 535 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 PLAGL2Q9UPG8 496 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 CORO2BQ9UQ03 480 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 SLC22A14Q9Y267 594 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 RGPD3A6NKT7 1758 aaPredicted RBP5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 RGPD4Q7Z3J3 1758 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 TOPAZ1Q8N9V7 1692 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 QRICH2Q9H0J4 1663 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 ATP8B3O60423 1300 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 MYH11P35749 1972 aa5.84□□□□□ -1.47
ECHDC1-215ENST00000475319 RREB1Q92766 1687 aa5.84□□□□□ -1.48
ECHDC1-215ENST00000475319 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.84□□□□□ -1.48
ECHDC1-215ENST00000475319 CCDC182A6NF36 153 aa5.84□□□□□ -1.48
ECHDC1-215ENST00000475319 GPR89AB7ZAQ6 455 aa5.84□□□□□ -1.48
ECHDC1-215ENST00000475319 DDX39AO00148 427 aaKnown RBP5.84□□□□□ -1.48
ECHDC1-215ENST00000475319 PDHXO00330 501 aa5.84□□□□□ -1.48
ECHDC1-215ENST00000475319 SCAMP1O15126 338 aa5.84□□□□□ -1.48
ECHDC1-215ENST00000475319 TCAPO15273 167 aa5.84□□□□□ -1.48
ECHDC1-215ENST00000475319 RRP8O43159 456 aaKnown RBP5.84□□□□□ -1.48
ECHDC1-215ENST00000475319 VEGFDO43915 354 aa5.84□□□□□ -1.48
ECHDC1-215ENST00000475319 TADA2AO75478 443 aa5.84□□□□□ -1.48
ECHDC1-215ENST00000475319 KCNK2O95069 426 aa5.84□□□□□ -1.48
ECHDC1-215ENST00000475319 CPNE6O95741 557 aa5.84□□□□□ -1.48
ECHDC1-215ENST00000475319 HSPA4LO95757 839 aa5.84□□□□□ -1.48
ECHDC1-215ENST00000475319 TSPAN12O95859 305 aa5.84□□□□□ -1.48
ECHDC1-215ENST00000475319 IFNA10P01566 189 aa5.84□□□□□ -1.48
ECHDC1-215ENST00000475319 CEACAM5P06731 702 aa5.84□□□□□ -1.48
ECHDC1-215ENST00000475319 GP1BAP07359 652 aa5.84□□□□□ -1.48
ECHDC1-215ENST00000475319 ADRB1P08588 477 aa5.84□□□□□ -1.48
ECHDC1-215ENST00000475319 CNPP09543 421 aaKnown RBP5.84□□□□□ -1.48
ECHDC1-215ENST00000475319 OR4E1P0C645 316 aa5.84□□□□□ -1.48
ECHDC1-215ENST00000475319 GPR89BP0CG08 455 aa5.84□□□□□ -1.48
ECHDC1-215ENST00000475319 CBR1P16152 277 aa5.84□□□□□ -1.48
ECHDC1-215ENST00000475319 SPI1P17947 270 aa5.84□□□□□ -1.48
ECHDC1-215ENST00000475319 KCNA5P22460 613 aa5.84□□□□□ -1.48
ECHDC1-215ENST00000475319 ITGB8P26012 769 aa5.84□□□□□ -1.48
ECHDC1-215ENST00000475319 MAGEA1P43355 309 aa5.84□□□□□ -1.48
ECHDC1-215ENST00000475319 ALDH7A1P49419 539 aaKnown RBP5.84□□□□□ -1.48
ECHDC1-215ENST00000475319 GPR143P51810 404 aa5.84□□□□□ -1.48
ECHDC1-215ENST00000475319 RAD23AP54725 363 aa5.84□□□□□ -1.48
ECHDC1-215ENST00000475319 SKP1P63208 163 aa5.84□□□□□ -1.48
ECHDC1-215ENST00000475319 IFITM3Q01628 133 aa5.84□□□□□ -1.48
ECHDC1-215ENST00000475319 TAP2Q03519 686 aa5.84□□□□□ -1.48
ECHDC1-215ENST00000475319 KLRC3Q07444 240 aa5.84□□□□□ -1.48
ECHDC1-215ENST00000475319 ILF3Q12906 894 aaKnown RBP eCLIP5.84□□□□□ -1.482e-7■■■■□ 19.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms