RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 FITM1A5D6W6 292 aa19.51■□□□□ 0.71
PDLIM4-206ENST00000474421 E5RI56 91 aa19.51■□□□□ 0.71
PDLIM4-206ENST00000474421 NIPSNAP2O75323 286 aa19.51■□□□□ 0.71
PDLIM4-206ENST00000474421 IPO13O94829 963 aaKnown RBP19.51■□□□□ 0.71
PDLIM4-206ENST00000474421 KRT14P02533 472 aa19.51■□□□□ 0.71
PDLIM4-206ENST00000474421 GBX1Q14549 363 aa19.51■□□□□ 0.71
PDLIM4-206ENST00000474421 MYBPC3Q14896 1274 aa19.51■□□□□ 0.71
PDLIM4-206ENST00000474421 ANKRD20A4Q4UJ75 823 aa19.51■□□□□ 0.71
PDLIM4-206ENST00000474421 PPP1R32Q7Z5V6 425 aa19.51■□□□□ 0.71
PDLIM4-206ENST00000474421 CILP2Q8IUL8 1156 aa19.51■□□□□ 0.71
PDLIM4-206ENST00000474421 MCUQ8NE86 351 aa19.51■□□□□ 0.71
PDLIM4-206ENST00000474421 OR2L3Q8NG85 312 aa19.51■□□□□ 0.71
PDLIM4-206ENST00000474421 VPS50Q96JG6 964 aa19.51■□□□□ 0.71
PDLIM4-206ENST00000474421 MIPEPQ99797 713 aa19.51■□□□□ 0.71
PDLIM4-206ENST00000474421 SLC26A1Q9H2B4 701 aa19.51■□□□□ 0.71
PDLIM4-206ENST00000474421 ATP13A2Q9NQ11 1180 aa19.51■□□□□ 0.71
PDLIM4-206ENST00000474421 SLC22A11Q9NSA0 550 aa19.51■□□□□ 0.71
PDLIM4-206ENST00000474421 RUVBL2Q9Y230 463 aaKnown RBP19.51■□□□□ 0.71
PDLIM4-206ENST00000474421 PCSK5Q92824 1860 aa19.51■□□□□ 0.71
PDLIM4-206ENST00000474421 MAST4O15021 2626 aa19.51■□□□□ 0.71
PDLIM4-206ENST00000474421 NUP210LQ5VU65 1888 aa19.5■□□□□ 0.71
PDLIM4-206ENST00000474421 FAM237BA0A1B0GVD1 139 aa19.5■□□□□ 0.71
PDLIM4-206ENST00000474421 SDR42E2A6NKP2 422 aa19.5■□□□□ 0.71
PDLIM4-206ENST00000474421 AGPSO00116 658 aa19.5■□□□□ 0.71
PDLIM4-206ENST00000474421 CNOT3O75175 753 aaKnown RBP19.5■□□□□ 0.71
PDLIM4-206ENST00000474421 AVILO75366 819 aa19.5■□□□□ 0.71
PDLIM4-206ENST00000474421 UMODP07911 640 aa19.5■□□□□ 0.71
PDLIM4-206ENST00000474421 PKMP14618 531 aaKnown RBP19.5■□□□□ 0.71
PDLIM4-206ENST00000474421 MMP11P24347 488 aa19.5■□□□□ 0.71
PDLIM4-206ENST00000474421 HSD17B2P37059 387 aa19.5■□□□□ 0.71
PDLIM4-206ENST00000474421 TERF1P54274 439 aa19.5■□□□□ 0.71
PDLIM4-206ENST00000474421 SOX8P57073 446 aa19.5■□□□□ 0.71
PDLIM4-206ENST00000474421 RAPSNQ13702 412 aa19.5■□□□□ 0.71
PDLIM4-206ENST00000474421 DHX34Q14147 1143 aaKnown RBP19.5■□□□□ 0.71
PDLIM4-206ENST00000474421 ESPL1Q14674 2120 aa19.5■□□□□ 0.71
PDLIM4-206ENST00000474421 TTLL9Q3SXZ7 439 aa19.5■□□□□ 0.71
PDLIM4-206ENST00000474421 CCSMST1Q4G0I0 132 aa19.5■□□□□ 0.71
PDLIM4-206ENST00000474421 SLC6A19Q695T7 634 aa19.5■□□□□ 0.71
PDLIM4-206ENST00000474421 CAND1Q86VP6 1230 aaKnown RBP19.5■□□□□ 0.71
PDLIM4-206ENST00000474421 RASGEF1CQ8N431 466 aa19.5■□□□□ 0.71
PDLIM4-206ENST00000474421 RBMXL3Q8N7X1 1067 aaKnown RBP19.5■□□□□ 0.71
PDLIM4-206ENST00000474421 OR9A1PQ8NGU1 263 aa19.5■□□□□ 0.71
PDLIM4-206ENST00000474421 TM9SF4Q92544 642 aa19.5■□□□□ 0.71
PDLIM4-206ENST00000474421 NAV2Q8IVL1 2488 aa19.5■□□□□ 0.71
PDLIM4-206ENST00000474421 SHANK1Q9Y566 2161 aa19.5■□□□□ 0.71
PDLIM4-206ENST00000474421 ZNF839A8K0R7 811 aa19.49■□□□□ 0.71
PDLIM4-206ENST00000474421 PHF2O75151 1096 aa19.49■□□□□ 0.71
PDLIM4-206ENST00000474421 CATP04040 527 aaKnown RBP19.49■□□□□ 0.71
PDLIM4-206ENST00000474421 ITGAXP20702 1163 aa19.49■□□□□ 0.71
PDLIM4-206ENST00000474421 CMPK1P30085 196 aa19.49■□□□□ 0.71
PDLIM4-206ENST00000474421 VSX2P58304 361 aaPredicted RBP19.49■□□□□ 0.71
PDLIM4-206ENST00000474421 SRSF1Q07955 248 aaKnown RBP eCLIP19.49■□□□□ 0.71
PDLIM4-206ENST00000474421 AIMP2Q13155 320 aaKnown RBP19.49■□□□□ 0.71
PDLIM4-206ENST00000474421 THOC5Q13769 683 aaKnown RBP19.49■□□□□ 0.71
PDLIM4-206ENST00000474421 ARHGAP19Q14CB8 494 aa19.49■□□□□ 0.71
PDLIM4-206ENST00000474421 INPP5JQ15735 1006 aaPredicted RBP19.49■□□□□ 0.71
PDLIM4-206ENST00000474421 ANKRD22Q5VYY1 191 aa19.49■□□□□ 0.71
PDLIM4-206ENST00000474421 OR2A1Q8NGT9 310 aa19.49■□□□□ 0.71
PDLIM4-206ENST00000474421 SMPDL3AQ92484 453 aa19.49■□□□□ 0.71
PDLIM4-206ENST00000474421 COL26A1Q96A83 441 aa19.49■□□□□ 0.71
PDLIM4-206ENST00000474421 MFRPQ9BY79 579 aa19.49■□□□□ 0.71
PDLIM4-206ENST00000474421 SLC29A3Q9BZD2 475 aa19.49■□□□□ 0.71
PDLIM4-206ENST00000474421 CCDC68Q9H2F9 335 aa19.49■□□□□ 0.71
PDLIM4-206ENST00000474421 KLHL42Q9P2K6 505 aa19.49■□□□□ 0.71
PDLIM4-206ENST00000474421 CDC23Q9UJX2 597 aa19.49■□□□□ 0.71
PDLIM4-206ENST00000474421 CTAGE9A4FU28 777 aa19.48■□□□□ 0.71
PDLIM4-206ENST00000474421 MYO1CO00159 1063 aa19.48■□□□□ 0.71
PDLIM4-206ENST00000474421 CTSVO60911 334 aa19.48■□□□□ 0.71
PDLIM4-206ENST00000474421 ERGP11308 486 aa19.48■□□□□ 0.71
PDLIM4-206ENST00000474421 MCM3P25205 808 aa19.48■□□□□ 0.71
PDLIM4-206ENST00000474421 PSMB5P28074 263 aa19.48■□□□□ 0.71
PDLIM4-206ENST00000474421 NKG7Q16617 165 aa19.48■□□□□ 0.71
PDLIM4-206ENST00000474421 CYP1B1Q16678 543 aa19.48■□□□□ 0.71
PDLIM4-206ENST00000474421 ACSBG2Q5FVE4 666 aa19.48■□□□□ 0.71
PDLIM4-206ENST00000474421 WASHC2DQ5SRD0 308 aa19.48■□□□□ 0.71
PDLIM4-206ENST00000474421 ZNF470Q6ECI4 717 aa19.48■□□□□ 0.71
PDLIM4-206ENST00000474421 PRMT9Q6P2P2 845 aa19.48■□□□□ 0.71
PDLIM4-206ENST00000474421 TTC27Q6P3X3 843 aa19.48■□□□□ 0.71
PDLIM4-206ENST00000474421 IGFL3Q6UXB1 125 aa19.48■□□□□ 0.71
PDLIM4-206ENST00000474421 NEK10Q6ZWH5 1172 aa19.48■□□□□ 0.71
PDLIM4-206ENST00000474421 CENPUQ71F23 418 aa19.48■□□□□ 0.71
PDLIM4-206ENST00000474421 RNF44Q7L0R7 432 aa19.48■□□□□ 0.71
PDLIM4-206ENST00000474421 LMNTD2Q8IXW0 634 aa19.48■□□□□ 0.71
PDLIM4-206ENST00000474421 Q8NA96 180 aa19.48■□□□□ 0.71
PDLIM4-206ENST00000474421 ZNF669Q96BR6 464 aaPredicted RBP19.48■□□□□ 0.71
PDLIM4-206ENST00000474421 FAM136AQ96C01 138 aa19.48■□□□□ 0.71
PDLIM4-206ENST00000474421 UTP6Q9NYH9 597 aaKnown RBP19.48■□□□□ 0.71
PDLIM4-206ENST00000474421 TSR3Q9UJK0 312 aaKnown RBP19.48■□□□□ 0.71
PDLIM4-206ENST00000474421 B3GNT3Q9Y2A9 372 aa19.48■□□□□ 0.71
PDLIM4-206ENST00000474421 USP9XQ93008 2570 aaPredicted RBP19.48■□□□□ 0.71
PDLIM4-206ENST00000474421 A0A1W2PPV9 198 aa19.47■□□□□ 0.71
PDLIM4-206ENST00000474421 HYKKA2RU49 373 aa19.47■□□□□ 0.71
PDLIM4-206ENST00000474421 VPS26AO75436 327 aa19.47■□□□□ 0.71
PDLIM4-206ENST00000474421 PSIP1O75475 530 aaKnown RBP19.47■□□□□ 0.71
PDLIM4-206ENST00000474421 USP1O94782 785 aa19.47■□□□□ 0.71
PDLIM4-206ENST00000474421 ERVK-10P10266 1014 aa19.47■□□□□ 0.71
PDLIM4-206ENST00000474421 GNLYP22749 145 aa19.47■□□□□ 0.71
PDLIM4-206ENST00000474421 RPA3P35244 121 aaPredicted RBP19.47■□□□□ 0.71
PDLIM4-206ENST00000474421 COILP38432 576 aaPredicted RBP19.47■□□□□ 0.71
PDLIM4-206ENST00000474421 KLHL38Q2WGJ6 581 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms