RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 SLC6A20Q9NP91 592 aa18.21■□□□□ 0.51
PTCD3-210ENST00000473829 LHX9Q9NQ69 397 aa18.21■□□□□ 0.51
PTCD3-210ENST00000473829 IKZF3Q9UKT9 509 aa18.21■□□□□ 0.51
PTCD3-210ENST00000473829 PCDHB3Q9Y5E6 796 aa18.21■□□□□ 0.51
PTCD3-210ENST00000473829 ANKRD12Q6UB98 2062 aa18.21■□□□□ 0.51
PTCD3-210ENST00000473829 ZBTB14O43829 449 aa18.2■□□□□ 0.5
PTCD3-210ENST00000473829 MT-ND3P03897 115 aa18.2■□□□□ 0.5
PTCD3-210ENST00000473829 SAT1P21673 171 aa18.2■□□□□ 0.5
PTCD3-210ENST00000473829 IMPA1P29218 277 aa18.2■□□□□ 0.5
PTCD3-210ENST00000473829 RORAP35398 523 aa18.2■□□□□ 0.5
PTCD3-210ENST00000473829 DLSTP36957 453 aa18.2■□□□□ 0.5
PTCD3-210ENST00000473829 TAS2R39P59534 338 aa18.2■□□□□ 0.5
PTCD3-210ENST00000473829 ARHGAP19Q14CB8 494 aa18.2■□□□□ 0.5
PTCD3-210ENST00000473829 PHKG1Q16816 387 aa18.2■□□□□ 0.5
PTCD3-210ENST00000473829 UBAP2Q5T6F2 1119 aaKnown RBP18.2■□□□□ 0.5
PTCD3-210ENST00000473829 LCN10Q6JVE6 187 aa18.2■□□□□ 0.5
PTCD3-210ENST00000473829 LRRC8EQ6NSJ5 796 aa18.2■□□□□ 0.5
PTCD3-210ENST00000473829 MBOAT1Q6ZNC8 495 aa18.2■□□□□ 0.5
PTCD3-210ENST00000473829 MYO1HQ8N1T3 1032 aa18.2■□□□□ 0.5
PTCD3-210ENST00000473829 SMPDL3AQ92484 453 aa18.2■□□□□ 0.5
PTCD3-210ENST00000473829 VPS39Q96JC1 886 aa18.2■□□□□ 0.5
PTCD3-210ENST00000473829 SLC45A3Q96JT2 553 aa18.2■□□□□ 0.5
PTCD3-210ENST00000473829 RHOJQ9H4E5 214 aa18.2■□□□□ 0.5
PTCD3-210ENST00000473829 PCMTD2Q9NV79 361 aa18.2■□□□□ 0.5
PTCD3-210ENST00000473829 SERTAD3Q9UJW9 196 aa18.2■□□□□ 0.5
PTCD3-210ENST00000473829 PADI1Q9ULC6 663 aa18.2■□□□□ 0.5
PTCD3-210ENST00000473829 PDE10AQ9Y233 779 aa18.2■□□□□ 0.5
PTCD3-210ENST00000473829 E7ENX8 843 aa18.19■□□□□ 0.5
PTCD3-210ENST00000473829 E7EQ34 232 aa18.19■□□□□ 0.5
PTCD3-210ENST00000473829 ZNF749O43361 778 aa18.19■□□□□ 0.5
PTCD3-210ENST00000473829 CTSVO60911 334 aa18.19■□□□□ 0.5
PTCD3-210ENST00000473829 OR2B3O76000 313 aa18.19■□□□□ 0.5
PTCD3-210ENST00000473829 FKBP9O95302 570 aa18.19■□□□□ 0.5
PTCD3-210ENST00000473829 C8GP07360 202 aa18.19■□□□□ 0.5
PTCD3-210ENST00000473829 GSTA2P09210 222 aa18.19■□□□□ 0.5
PTCD3-210ENST00000473829 ZNF37AP17032 561 aaPredicted RBP18.19■□□□□ 0.5
PTCD3-210ENST00000473829 IL2P60568 153 aa18.19■□□□□ 0.5
PTCD3-210ENST00000473829 TAP2Q03519 686 aa18.19■□□□□ 0.5
PTCD3-210ENST00000473829 TSTA3Q13630 321 aaPredicted RBP18.19■□□□□ 0.5
PTCD3-210ENST00000473829 SOWAHCQ53LP3 525 aaPredicted RBP18.19■□□□□ 0.5
PTCD3-210ENST00000473829 ZNF517Q6ZMY9 492 aaPredicted RBP18.19■□□□□ 0.5
PTCD3-210ENST00000473829 CYS1Q717R9 158 aa18.19■□□□□ 0.5
PTCD3-210ENST00000473829 CEP97Q8IW35 865 aa18.19■□□□□ 0.5
PTCD3-210ENST00000473829 N4BP2L2Q92802 583 aaPredicted RBP18.19■□□□□ 0.5
PTCD3-210ENST00000473829 CLIP3Q96DZ5 547 aa18.19■□□□□ 0.5
PTCD3-210ENST00000473829 LRFN5Q96NI6 719 aa18.19■□□□□ 0.5
PTCD3-210ENST00000473829 UBL7Q96S82 380 aaPredicted RBP18.19■□□□□ 0.5
PTCD3-210ENST00000473829 ACTR5Q9H9F9 607 aaPredicted RBP18.19■□□□□ 0.5
PTCD3-210ENST00000473829 NSMCE4AQ9NXX6 385 aa18.19■□□□□ 0.5
PTCD3-210ENST00000473829 EURLQ9NYK6 297 aa18.19■□□□□ 0.5
PTCD3-210ENST00000473829 TAC3Q9UHF0 121 aa18.19■□□□□ 0.5
PTCD3-210ENST00000473829 PLCL2Q9UPR0 1127 aa18.19■□□□□ 0.5
PTCD3-210ENST00000473829 KLK4Q9Y5K2 254 aa18.19■□□□□ 0.5
PTCD3-210ENST00000473829 CACNA1GO43497 2377 aa18.19■□□□□ 0.5
PTCD3-210ENST00000473829 HEATR5BQ9P2D3 2071 aa18.19■□□□□ 0.5
PTCD3-210ENST00000473829 IGKV1-8A0A0C4DH67 115 aa18.18■□□□□ 0.5
PTCD3-210ENST00000473829 NKX2-8O15522 239 aa18.18■□□□□ 0.5
PTCD3-210ENST00000473829 CCNYL3P0C7X3 344 aa18.18■□□□□ 0.5
PTCD3-210ENST00000473829 TCN2P20062 427 aa18.18■□□□□ 0.5
PTCD3-210ENST00000473829 ECHS1P30084 290 aa18.18■□□□□ 0.5
PTCD3-210ENST00000473829 RPA3P35244 121 aaPredicted RBP18.18■□□□□ 0.5
PTCD3-210ENST00000473829 RHDQ02161 417 aa18.18■□□□□ 0.5
PTCD3-210ENST00000473829 SP140Q13342 867 aa18.18■□□□□ 0.5
PTCD3-210ENST00000473829 DNASE1L3Q13609 305 aa18.18■□□□□ 0.5
PTCD3-210ENST00000473829 EFTUD2Q15029 972 aaKnown RBP eCLIP18.18■□□□□ 0.58e-7■■■■■ 34.2
PTCD3-210ENST00000473829 PTCHD3Q3KNS1 767 aa18.18■□□□□ 0.5
PTCD3-210ENST00000473829 KBTBD12Q3ZCT8 623 aa18.18■□□□□ 0.5
PTCD3-210ENST00000473829 ATP1A1-AS1Q5TC04 95 aa18.18■□□□□ 0.5
PTCD3-210ENST00000473829 MCATQ8IVS2 390 aaKnown RBP18.18■□□□□ 0.5
PTCD3-210ENST00000473829 SYTL1Q8IYJ3 562 aa18.18■□□□□ 0.5
PTCD3-210ENST00000473829 DSELQ8IZU8 1212 aa18.18■□□□□ 0.5
PTCD3-210ENST00000473829 ZSCAN1Q8NBB4 408 aa18.18■□□□□ 0.5
PTCD3-210ENST00000473829 FBF1Q8TES7 1133 aa18.18■□□□□ 0.5
PTCD3-210ENST00000473829 STARD8Q92502 1023 aa18.18■□□□□ 0.5
PTCD3-210ENST00000473829 CAB39LQ9H9S4 337 aa18.18■□□□□ 0.5
PTCD3-210ENST00000473829 INTS7Q9NVH2 962 aaKnown RBP18.18■□□□□ 0.5
PTCD3-210ENST00000473829 STOX2Q9P2F5 926 aaPredicted RBP18.18■□□□□ 0.5
PTCD3-210ENST00000473829 MTO1Q9Y2Z2 717 aaKnown RBP18.18■□□□□ 0.5
PTCD3-210ENST00000473829 ZNF891A8MT65 544 aaPredicted RBP18.17■□□□□ 0.5
PTCD3-210ENST00000473829 TARM1B6A8C7 271 aa18.17■□□□□ 0.5
PTCD3-210ENST00000473829 MEN1O00255 615 aa18.17■□□□□ 0.5
PTCD3-210ENST00000473829 SLC16A5O15375 505 aa18.17■□□□□ 0.5
PTCD3-210ENST00000473829 FAM155BO75949 473 aa18.17■□□□□ 0.5
PTCD3-210ENST00000473829 PRKAR1AP10644 381 aa18.17■□□□□ 0.5
PTCD3-210ENST00000473829 CMPK1P30085 196 aa18.17■□□□□ 0.5
PTCD3-210ENST00000473829 HSD17B2P37059 387 aa18.17■□□□□ 0.5
PTCD3-210ENST00000473829 ZNF385CQ66K41 422 aaPredicted RBP18.17■□□□□ 0.5
PTCD3-210ENST00000473829 GPR135Q8IZ08 494 aa18.17■□□□□ 0.5
PTCD3-210ENST00000473829 ZNF655Q8N720 491 aaPredicted RBP18.17■□□□□ 0.5
PTCD3-210ENST00000473829 LRRN4CLQ8ND94 238 aa18.17■□□□□ 0.5
PTCD3-210ENST00000473829 ANKRD49Q8WVL7 239 aa18.17■□□□□ 0.5
PTCD3-210ENST00000473829 CDKL2Q92772 493 aa18.17■□□□□ 0.5
PTCD3-210ENST00000473829 MR1Q95460 341 aa18.17■□□□□ 0.5
PTCD3-210ENST00000473829 ZUFSPQ96AP4 578 aa18.17■□□□□ 0.5
PTCD3-210ENST00000473829 RBBP8Q99708 897 aa18.17■□□□□ 0.5
PTCD3-210ENST00000473829 CPNE1Q99829 537 aa18.17■□□□□ 0.5
PTCD3-210ENST00000473829 DPH7Q9BTV6 452 aa18.17■□□□□ 0.5
PTCD3-210ENST00000473829 CHST8Q9H2A9 424 aa18.17■□□□□ 0.5
PTCD3-210ENST00000473829 SYNPO2LQ9H987 977 aa18.17■□□□□ 0.5
PTCD3-210ENST00000473829 PARVBQ9HBI1 364 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms