RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 CTBP1Q13363 440 aa7.73□□□□□ -1.17
USP48-207ENST00000471752 CUL1Q13616 776 aa7.73□□□□□ -1.17
USP48-207ENST00000471752 GBX1Q14549 363 aa7.73□□□□□ -1.17
USP48-207ENST00000471752 DNAJC21Q5F1R6 531 aaKnown RBP7.73□□□□□ -1.17
USP48-207ENST00000471752 LYPLAL1Q5VWZ2 237 aa7.73□□□□□ -1.17
USP48-207ENST00000471752 PTRHD1Q6GMV3 140 aaKnown RBP7.73□□□□□ -1.17
USP48-207ENST00000471752 LRRC8BQ6P9F7 803 aa7.73□□□□□ -1.17
USP48-207ENST00000471752 ZNF449Q6P9G9 518 aa7.73□□□□□ -1.17
USP48-207ENST00000471752 CYHR1Q6ZMK1 362 aa7.73□□□□□ -1.17
USP48-207ENST00000471752 OVCH1Q7RTY7 1134 aa7.73□□□□□ -1.17
USP48-207ENST00000471752 HOOK3Q86VS8 718 aa7.73□□□□□ -1.17
USP48-207ENST00000471752 DENND6AQ8IWF6 608 aa7.73□□□□□ -1.17
USP48-207ENST00000471752 CCDC89Q8N998 374 aa7.73□□□□□ -1.17
USP48-207ENST00000471752 CATSPER1Q8NEC5 780 aa7.73□□□□□ -1.17
USP48-207ENST00000471752 PPHLN1Q8NEY8 458 aaKnown RBP7.73□□□□□ -1.17
USP48-207ENST00000471752 SKA2Q8WVK7 121 aaPredicted RBP7.73□□□□□ -1.17
USP48-207ENST00000471752 ASZ1Q8WWH4 475 aa7.73□□□□□ -1.17
USP48-207ENST00000471752 DLG3Q92796 817 aa7.73□□□□□ -1.17
USP48-207ENST00000471752 N4BP2L2Q92802 583 aaPredicted RBP7.73□□□□□ -1.17
USP48-207ENST00000471752 SGSM3Q96HU1 749 aa7.73□□□□□ -1.17
USP48-207ENST00000471752 C10orf90Q96M02 699 aa7.73□□□□□ -1.17
USP48-207ENST00000471752 CCDC138Q96M89 665 aa7.73□□□□□ -1.17
USP48-207ENST00000471752 PKP4Q99569 1192 aa7.73□□□□□ -1.17
USP48-207ENST00000471752 CHRNA10Q9GZZ6 450 aa7.73□□□□□ -1.17
USP48-207ENST00000471752 SYTL2Q9HCH5 934 aa7.73□□□□□ -1.17
USP48-207ENST00000471752 CUTCQ9NTM9 273 aa7.73□□□□□ -1.17
USP48-207ENST00000471752 ABCF3Q9NUQ8 709 aa7.73□□□□□ -1.17
USP48-207ENST00000471752 IRAK4Q9NWZ3 460 aa7.73□□□□□ -1.17
USP48-207ENST00000471752 GPR83Q9NYM4 423 aa7.73□□□□□ -1.17
USP48-207ENST00000471752 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.73□□□□□ -1.17
USP48-207ENST00000471752 ZC3H7BQ9UGR2 993 aaKnown RBP7.73□□□□□ -1.17
USP48-207ENST00000471752 FBXL4Q9UKA2 621 aa7.73□□□□□ -1.17
USP48-207ENST00000471752 SH2B3Q9UQQ2 575 aa7.73□□□□□ -1.17
USP48-207ENST00000471752 NEU2Q9Y3R4 380 aa7.73□□□□□ -1.17
USP48-207ENST00000471752 HS3ST3B1Q9Y662 390 aa7.73□□□□□ -1.17
USP48-207ENST00000471752 ANKRD12Q6UB98 2062 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 CREBBPQ92793 2442 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 ZCWPW2A0A1B0GU75 182 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 C9J4A7 227 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 P2RX6O15547 441 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 DNAJB6O75190 326 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 NDUFS3O75489 264 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 MATN4O95460 622 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 CLDN1O95832 211 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 F10P00742 488 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 EIF2S1P05198 315 aaKnown RBP7.72□□□□□ -1.17
USP48-207ENST00000471752 APOA4P06727 396 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 GSTM1P09488 218 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 RPS3P23396 243 aaKnown RBP eCLIP7.72□□□□□ -1.17
USP48-207ENST00000471752 FOLR3P41439 243 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 NPY2RP49146 381 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 CLCN7P51798 805 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 GSTM4Q03013 218 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 GPS1Q13098 491 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 NR6A1Q15406 480 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 SYT16Q17RD7 645 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 ZXDCQ2QGD7 858 aaPredicted RBP7.72□□□□□ -1.17
USP48-207ENST00000471752 HKDC1Q2TB90 917 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 VWA2Q5GFL6 755 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 TLDC1Q6P9B6 456 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 CYB5D1Q6P9G0 228 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 DRICH1Q6PGQ1 229 aaPredicted RBP7.72□□□□□ -1.17
USP48-207ENST00000471752 UNC5DQ6UXZ4 953 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 MED25Q71SY5 747 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 NLRP9Q7RTR0 991 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 GSTA5Q7RTV2 222 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 IGDCC3Q8IVU1 814 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 DCUN1D3Q8IWE4 304 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 LRRC8AQ8IWT6 810 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 LRRC56Q8IYG6 542 aaPredicted RBP7.72□□□□□ -1.17
USP48-207ENST00000471752 TMEM102Q8N9M5 508 aaPredicted RBP7.72□□□□□ -1.17
USP48-207ENST00000471752 GALNT11Q8NCW6 608 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 OR2L3Q8NG85 312 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 PRR7Q8TB68 274 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 COG1Q8WTW3 980 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 PNPLA2Q96AD5 504 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 PTERQ96BW5 349 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 PWWP2AQ96N64 755 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 SELENOSQ9BQE4 189 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 DPH7Q9BTV6 452 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 NDC1Q9BTX1 674 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 PLAC1Q9HBJ0 212 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 FBXO6Q9NRD1 293 aaPredicted RBP7.72□□□□□ -1.17
USP48-207ENST00000471752 CUEDC1Q9NWM3 386 aaPredicted RBP7.72□□□□□ -1.17
USP48-207ENST00000471752 PLA2G3Q9NZ20 509 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 BFARQ9NZS9 450 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 MAP10Q9P2G4 905 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 SLC17A6Q9P2U8 582 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 GPN3Q9UHW5 284 aaPredicted RBP7.72□□□□□ -1.17
USP48-207ENST00000471752 ERRFI1Q9UJM3 462 aaPredicted RBP7.72□□□□□ -1.17
USP48-207ENST00000471752 SLC39A10Q9ULF5 831 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 SOX13Q9UN79 622 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 ZNF451Q9Y4E5 1061 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 AP1M2Q9Y6Q5 423 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 OTOGQ6ZRI0 2925 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 POLQO75417 2590 aa7.72□□□□□ -1.17
USP48-207ENST00000471752 MAP1AP78559 2803 aaPredicted RBP7.72□□□□□ -1.17
USP48-207ENST00000471752 A0A1B0GX78 115 aa7.71□□□□□ -1.18
USP48-207ENST00000471752 HYKKA2RU49 373 aa7.71□□□□□ -1.18
USP48-207ENST00000471752 CTAGE15A4D2H0 777 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms