RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 CHMP5Q9NZZ3 219 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 SAE1Q9UBE0 346 aaPredicted RBP6.55□□□□□ -1.36
HDAC1-204ENST00000471488 LIMA1Q9UHB6 759 aaKnown RBP6.55□□□□□ -1.36
HDAC1-204ENST00000471488 POLG2Q9UHN1 485 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 TSR3Q9UJK0 312 aaKnown RBP6.55□□□□□ -1.36
HDAC1-204ENST00000471488 SLC39A10Q9ULF5 831 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 MKL2Q9ULH7 1088 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 FAM169AQ9Y6X4 670 aa6.55□□□□□ -1.36
HDAC1-204ENST00000471488 CACNA1CQ13936 2221 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 PRRC2AP48634 2157 aaKnown RBP6.54□□□□□ -1.36
HDAC1-204ENST00000471488 IGHV1-45A0A0A0MS14 117 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 LOC285095A0A1B0GVY8 99 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 RCCD1A6NED2 376 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 USP27XA6NNY8 438 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 KIAA1324LA8MWY0 1029 aaPredicted RBP6.54□□□□□ -1.36
HDAC1-204ENST00000471488 BHMG1C9JSJ3 638 aaPredicted RBP6.54□□□□□ -1.36
HDAC1-204ENST00000471488 E9PLN8 166 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 PDE9AO76083 593 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 CD46P15529 392 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 ZNF24P17028 368 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 PCSK6P29122 969 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 CD68P34810 354 aaPredicted RBP6.54□□□□□ -1.36
HDAC1-204ENST00000471488 RFC3P40938 356 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 MYL5Q02045 173 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 CACNG1Q06432 222 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 TAF1AQ15573 450 aaPredicted RBP6.54□□□□□ -1.36
HDAC1-204ENST00000471488 MINDY4Q4G0A6 757 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 ATG9BQ674R7 924 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 FRMPD2BQ6IN97 320 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 GALNTL5Q7Z4T8 443 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 SNX20Q7Z614 316 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 SERPINA9Q86WD7 417 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 TBC1D21Q8IYX1 336 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 TMEM178AQ8NBL3 297 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 GOT1L1Q8NHS2 421 aaPredicted RBP6.54□□□□□ -1.36
HDAC1-204ENST00000471488 FAM71BQ8TC56 605 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 TFB1MQ8WVM0 346 aaKnown RBP6.54□□□□□ -1.36
HDAC1-204ENST00000471488 METTL21AQ8WXB1 218 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 OXNAD1Q96HP4 312 aaPredicted RBP6.54□□□□□ -1.36
HDAC1-204ENST00000471488 TEKT5Q96M29 485 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 MIPEPQ99797 713 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 VKORC1Q9BQB6 163 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 GPATCH1Q9BRR8 931 aaKnown RBP6.54□□□□□ -1.36
HDAC1-204ENST00000471488 UTP23Q9BRU9 249 aaKnown RBP6.54□□□□□ -1.36
HDAC1-204ENST00000471488 ISCUQ9H1K1 167 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 SLC26A1Q9H2B4 701 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 KCNK13Q9HB14 408 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 RTN4Q9NQC3 1192 aaKnown RBP6.54□□□□□ -1.36
HDAC1-204ENST00000471488 ABCF3Q9NUQ8 709 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 ZDHHC3Q9NYG2 299 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 IL1RAPL1Q9NZN1 696 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 LRFN1Q9P244 771 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 TNFRSF10DQ9UBN6 386 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 ST6GALNAC2Q9UJ37 374 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 ANKRD12Q6UB98 2062 aa6.54□□□□□ -1.36
HDAC1-204ENST00000471488 MAP1AP78559 2803 aaPredicted RBP6.54□□□□□ -1.36
HDAC1-204ENST00000471488 LOC105369274A0A096LPK9 316 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 LOC102723532A0A0G2JNH3 316 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 A0A1B0GTH9 108 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 FAM237BA0A1B0GVD1 139 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 MACROD2A1Z1Q3 448 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 FAM221AA4D161 298 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 VSTM2BA6NLU5 285 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 TFECO14948 347 aaPredicted RBP6.53□□□□□ -1.36
HDAC1-204ENST00000471488 NRP2O60462 931 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 PROSCO94903 275 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 MED26O95402 600 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 CRTAMO95727 393 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 FTH1P02794 183 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 TPBGLP0DKB5 382 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 C8orf89P0DMQ9 161 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 ICAM2P13598 275 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 ZFXP17010 805 aaPredicted RBP6.53□□□□□ -1.36
HDAC1-204ENST00000471488 PSMB5P28074 263 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 PKLRP30613 574 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 CHRNB4P30926 498 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 PTGER1P34995 402 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 PTGS2P35354 604 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 ARHGAP25P42331 645 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 AP2B1P63010 937 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 ADAM8P78325 824 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 PMPCAQ10713 525 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 RPA4Q13156 261 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 MPP3Q13368 585 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 TUBA3CQ13748 450 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 SLC14A2Q15849 920 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 TAZQ16635 292 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 SYT16Q17RD7 645 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 MUM1Q2TAK8 710 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 FILIP1LQ4L180 1135 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 ACER2Q5QJU3 275 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 YOD1Q5VVQ6 348 aaPredicted RBP6.53□□□□□ -1.36
HDAC1-204ENST00000471488 TUBA3EQ6PEY2 450 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 SASS6Q6UVJ0 657 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 Q6ZPB1 254 aaPredicted RBP6.53□□□□□ -1.36
HDAC1-204ENST00000471488 RIPOR1Q6ZS17 1223 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 DMRTC2Q8IXT2 367 aaPredicted RBP6.53□□□□□ -1.36
HDAC1-204ENST00000471488 CLYBLQ8N0X4 340 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 OR4N4Q8N0Y3 316 aa6.53□□□□□ -1.36
HDAC1-204ENST00000471488 ZNF567Q8N184 647 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms