RNA–Protein interactions for RNA: ENST00000471322.2

HSPG2-208, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 1,602 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-208ENST00000471322 PCCBP05166 539 aa16.98■□□□□ 0.31
HSPG2-208ENST00000471322 AKT2P31751 481 aa16.98■□□□□ 0.31
HSPG2-208ENST00000471322 PREPP48147 710 aa16.98■□□□□ 0.31
HSPG2-208ENST00000471322 C21orf59P57076 290 aa16.98■□□□□ 0.31
HSPG2-208ENST00000471322 CDK3Q00526 305 aa16.98■□□□□ 0.31
HSPG2-208ENST00000471322 RPA4Q13156 261 aa16.98■□□□□ 0.31
HSPG2-208ENST00000471322 RPS6KA2Q15349 733 aa16.98■□□□□ 0.31
HSPG2-208ENST00000471322 STPG1Q5TH74 334 aa16.98■□□□□ 0.31
HSPG2-208ENST00000471322 MBOAT1Q6ZNC8 495 aa16.98■□□□□ 0.31
HSPG2-208ENST00000471322 MIER2Q8N344 545 aa16.98■□□□□ 0.31
HSPG2-208ENST00000471322 MINDY1Q8N5J2 469 aa16.98■□□□□ 0.31
HSPG2-208ENST00000471322 TMEM145Q8NBT3 493 aa16.98■□□□□ 0.31
HSPG2-208ENST00000471322 PLA2G15Q8NCC3 412 aa16.98■□□□□ 0.31
HSPG2-208ENST00000471322 CDK15Q96Q40 435 aa16.98■□□□□ 0.31
HSPG2-208ENST00000471322 TEX101Q9BY14 249 aa16.98■□□□□ 0.31
HSPG2-208ENST00000471322 MRPL1Q9BYD6 325 aaKnown RBP16.98■□□□□ 0.31
HSPG2-208ENST00000471322 DNAJC11Q9NVH1 559 aa16.98■□□□□ 0.31
HSPG2-208ENST00000471322 BAIAP2L1Q9UHR4 511 aa16.98■□□□□ 0.31
HSPG2-208ENST00000471322 DMTF1Q9Y222 760 aa16.98■□□□□ 0.31
HSPG2-208ENST00000471322 A0A1W2PR77 199 aa16.97■□□□□ 0.31
HSPG2-208ENST00000471322 ARHGEF33A8MVX0 844 aa16.97■□□□□ 0.31
HSPG2-208ENST00000471322 CHUKO15111 745 aa16.97■□□□□ 0.31
HSPG2-208ENST00000471322 SYPP08247 313 aa16.97■□□□□ 0.31
HSPG2-208ENST00000471322 SNRPB2P08579 225 aaKnown RBP16.97■□□□□ 0.31
HSPG2-208ENST00000471322 PBLDP30039 288 aaPredicted RBP16.97■□□□□ 0.31
HSPG2-208ENST00000471322 HNRNPH1P31943 449 aaKnown RBP16.97■□□□□ 0.31
HSPG2-208ENST00000471322 TRIM23P36406 574 aa16.97■□□□□ 0.31
HSPG2-208ENST00000471322 SLC25A3Q00325 362 aa16.97■□□□□ 0.31
HSPG2-208ENST00000471322 RSPO4Q2I0M5 234 aaPredicted RBP16.97■□□□□ 0.31
HSPG2-208ENST00000471322 HLA-BQ31612 363 aa16.97■□□□□ 0.31
HSPG2-208ENST00000471322 PTCHD3Q3KNS1 767 aa16.97■□□□□ 0.31
HSPG2-208ENST00000471322 ATP6AP1LQ52LC2 224 aa16.97■□□□□ 0.31
HSPG2-208ENST00000471322 AGKQ53H12 422 aa16.97■□□□□ 0.31
HSPG2-208ENST00000471322 IL27RAQ6UWB1 636 aa16.97■□□□□ 0.31
HSPG2-208ENST00000471322 GCNT7Q6ZNI0 430 aa16.97■□□□□ 0.31
HSPG2-208ENST00000471322 KLHDC8AQ8IYD2 350 aa16.97■□□□□ 0.31
HSPG2-208ENST00000471322 SNX31Q8N9S9 440 aa16.97■□□□□ 0.31
HSPG2-208ENST00000471322 OR13H1Q8NG92 308 aa16.97■□□□□ 0.31
HSPG2-208ENST00000471322 CFAP61Q8NHU2 1237 aa16.97■□□□□ 0.31
HSPG2-208ENST00000471322 SLC25A23Q9BV35 468 aa16.97■□□□□ 0.31
HSPG2-208ENST00000471322 GAREM1Q9H706 876 aa16.97■□□□□ 0.31
HSPG2-208ENST00000471322 WDR26Q9H7D7 661 aa16.97■□□□□ 0.31
HSPG2-208ENST00000471322 TMEM9BQ9NQ34 198 aa16.97■□□□□ 0.31
HSPG2-208ENST00000471322 MBNL1Q9NR56 388 aaKnown RBP16.97■□□□□ 0.31
HSPG2-208ENST00000471322 PHPT1Q9NRX4 125 aaPredicted RBP16.97■□□□□ 0.31
HSPG2-208ENST00000471322 FAM8A1Q9UBU6 413 aa16.97■□□□□ 0.31
HSPG2-208ENST00000471322 PCDH15Q96QU1 1955 aa16.97■□□□□ 0.31
HSPG2-208ENST00000471322 CABIN1Q9Y6J0 2220 aa16.96■□□□□ 0.31
HSPG2-208ENST00000471322 TLR4O00206 839 aa16.96■□□□□ 0.31
HSPG2-208ENST00000471322 SLC28A1O00337 649 aa16.96■□□□□ 0.31
HSPG2-208ENST00000471322 AIM2O14862 343 aa16.96■□□□□ 0.31
HSPG2-208ENST00000471322 VILLO15195 856 aa16.96■□□□□ 0.31
HSPG2-208ENST00000471322 ULK1O75385 1050 aa16.96■□□□□ 0.31
HSPG2-208ENST00000471322 KRT6AP02538 564 aa16.96■□□□□ 0.31
HSPG2-208ENST00000471322 KRT6BP04259 564 aa16.96■□□□□ 0.31
HSPG2-208ENST00000471322 ALDOCP09972 364 aaKnown RBP16.96■□□□□ 0.31
HSPG2-208ENST00000471322 ITGAXP20702 1163 aa16.96■□□□□ 0.31
HSPG2-208ENST00000471322 KRT6CP48668 564 aa16.96■□□□□ 0.31
HSPG2-208ENST00000471322 ERVK-8P63133 956 aa16.96■□□□□ 0.31
HSPG2-208ENST00000471322 ART3Q13508 389 aa16.96■□□□□ 0.31
HSPG2-208ENST00000471322 GRB7Q14451 532 aa16.96■□□□□ 0.31
HSPG2-208ENST00000471322 SMU1Q2TAY7 513 aa16.96■□□□□ 0.31
HSPG2-208ENST00000471322 GGTA1PQ4G0N0 100 aa16.96■□□□□ 0.31
HSPG2-208ENST00000471322 LRRTM4Q86VH4 590 aa16.96■□□□□ 0.31
HSPG2-208ENST00000471322 AMZ2Q86W34 360 aa16.96■□□□□ 0.31
HSPG2-208ENST00000471322 ZNF547Q8IVP9 402 aa16.96■□□□□ 0.31
HSPG2-208ENST00000471322 ULK2Q8IYT8 1036 aa16.96■□□□□ 0.31
HSPG2-208ENST00000471322 MAGEC3Q8TD91 643 aa16.96■□□□□ 0.31
HSPG2-208ENST00000471322 ASB12Q8WXK4 309 aa16.96■□□□□ 0.31
HSPG2-208ENST00000471322 BMFQ96LC9 184 aa16.96■□□□□ 0.31
HSPG2-208ENST00000471322 ACTR8Q9H981 624 aa16.96■□□□□ 0.31
HSPG2-208ENST00000471322 SDR39U1Q9NRG7 319 aaPredicted RBP16.96■□□□□ 0.31
HSPG2-208ENST00000471322 CDV3Q9UKY7 258 aaKnown RBP16.96■□□□□ 0.31
HSPG2-208ENST00000471322 PRPF19Q9UMS4 504 aaKnown RBP16.96■□□□□ 0.31
HSPG2-208ENST00000471322 PTGDR2Q9Y5Y4 395 aa16.96■□□□□ 0.31
HSPG2-208ENST00000471322 SPTBN2O15020 2390 aa16.96■□□□□ 0.31
HSPG2-208ENST00000471322 RGS14O43566 566 aa16.96■□□□□ 0.3
HSPG2-208ENST00000471322 PEX11AO75192 247 aa16.96■□□□□ 0.3
HSPG2-208ENST00000471322 THEGLP0DJG4 465 aa16.96■□□□□ 0.3
HSPG2-208ENST00000471322 GPX3P22352 226 aa16.96■□□□□ 0.3
HSPG2-208ENST00000471322 NUDT1P36639 197 aa16.96■□□□□ 0.3
HSPG2-208ENST00000471322 NUDT2P50583 147 aa16.96■□□□□ 0.3
HSPG2-208ENST00000471322 Q6ZSR6 202 aa16.96■□□□□ 0.3
HSPG2-208ENST00000471322 NET1Q7Z628 596 aaPredicted RBP16.96■□□□□ 0.3
HSPG2-208ENST00000471322 DEFB107AQ8IZN7 70 aa16.96■□□□□ 0.3
HSPG2-208ENST00000471322 TSPEARQ8WU66 669 aa16.96■□□□□ 0.3
HSPG2-208ENST00000471322 KLHDC7BQ96G42 594 aa16.96■□□□□ 0.3
HSPG2-208ENST00000471322 PPP3R2Q96LZ3 170 aa16.96■□□□□ 0.3
HSPG2-208ENST00000471322 DENND2DQ9H6A0 471 aaPredicted RBP16.96■□□□□ 0.3
HSPG2-208ENST00000471322 GULP1Q9UBP9 304 aa16.96■□□□□ 0.3
HSPG2-208ENST00000471322 TMEM98Q9Y2Y6 226 aa16.96■□□□□ 0.3
HSPG2-208ENST00000471322 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.96■□□□□ 0.3
HSPG2-208ENST00000471322 ASCC3Q8N3C0 2202 aaKnown RBP16.95■□□□□ 0.3
HSPG2-208ENST00000471322 LRRK1Q38SD2 2015 aa16.95■□□□□ 0.3
HSPG2-208ENST00000471322 CNOT1A5YKK6 2376 aaKnown RBP16.95■□□□□ 0.3
HSPG2-208ENST00000471322 A0A088AWK7 358 aa16.95■□□□□ 0.3
HSPG2-208ENST00000471322 BBIP1A8MTZ0 92 aa16.95■□□□□ 0.3
HSPG2-208ENST00000471322 KMOO15229 486 aa16.95■□□□□ 0.3
HSPG2-208ENST00000471322 FOXD2O60548 495 aaPredicted RBP16.95■□□□□ 0.3
HSPG2-208ENST00000471322 UGDHO60701 494 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms