RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 CSNK2BP67870 215 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 PAX8Q06710 450 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 LY6DQ14210 128 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 MTF1Q14872 753 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 PCLAFQ15004 111 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 EFTUD2Q15029 972 aaKnown RBP eCLIP1.18□□□□□ -2.22
UBXN4-207ENST00000471246 ZNF74Q16587 644 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 C15orf59Q2T9L4 293 aaPredicted RBP1.18□□□□□ -2.22
UBXN4-207ENST00000471246 UGT3A2Q3SY77 523 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 MOGAT2Q3SYC2 334 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 SYT14P1Q58G82 188 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 IGSF11Q5DX21 431 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 SLC35D3Q5M8T2 416 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 LCN1P1Q5VSP4 162 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 LYSMD4Q5XG99 296 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 C11orf63Q6NUN7 778 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 UGT3A1Q6NUS8 523 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 G2E3Q7L622 706 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 SLC47A2Q86VL8 602 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 NUDT13Q86X67 352 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 FBXL16Q8N461 479 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 LINC00612Q8N6U2 182 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 POM121L12Q8N7R1 296 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 TEX19Q8NA77 164 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 MCUQ8NE86 351 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 C17orf47Q8NEP4 570 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 OR10Q1Q8NGQ4 319 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 EXD1Q8NHP7 514 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 C11orf45Q8TAV5 145 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 APOBEC4Q8WW27 367 aaKnown RBP1.18□□□□□ -2.22
UBXN4-207ENST00000471246 RASL10AQ92737 203 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 SYN2Q92777 582 aaPredicted RBP1.18□□□□□ -2.22
UBXN4-207ENST00000471246 ZNF622Q969S3 477 aaKnown RBP eCLIP1.18□□□□□ -2.229e-12■■■■■ 27.5
UBXN4-207ENST00000471246 ARSGQ96EG1 525 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 C4orf45Q96LM5 186 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 TREX2Q9BQ50 279 aaPredicted RBP1.18□□□□□ -2.22
UBXN4-207ENST00000471246 ZHX3Q9H4I2 956 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 MED20Q9H944 212 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 PANK3Q9H999 370 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 SLC35C2Q9NQQ7 365 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 HAUS2Q9NVX0 235 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 NDE1Q9NXR1 346 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 ADD3Q9UEY8 706 aaKnown RBP1.18□□□□□ -2.22
UBXN4-207ENST00000471246 C19orf25Q9UFG5 118 aaPredicted RBP1.18□□□□□ -2.22
UBXN4-207ENST00000471246 TBC1D29Q9UFV1 150 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 MAN1B1Q9UKM7 699 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 TMED3Q9Y3Q3 217 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 CSNK1G3Q9Y6M4 447 aa1.18□□□□□ -2.22
UBXN4-207ENST00000471246 ITIH6Q6UXX5 1313 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 A0A087WUV0 522 aaPredicted RBP1.17□□□□□ -2.22
UBXN4-207ENST00000471246 O00370 1275 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 ARPC2O15144 300 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 ENTPD3O75355 529 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 TRUB2O95900 331 aaKnown RBP1.17□□□□□ -2.22
UBXN4-207ENST00000471246 HPRP00739 348 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 IGHEP01854 428 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 DANCRP0C864 163 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 CSH1P0DML2 217 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 CSH2P0DML3 217 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 HLA-FP30511 346 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 HOXD13P35453 343 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 TSFMP43897 325 aaKnown RBP1.17□□□□□ -2.22
UBXN4-207ENST00000471246 PGFP49763 221 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 STAT2P52630 851 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 LIMK2P53671 638 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 XGP55808 180 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 GEMIN4P57678 1058 aaKnown RBP1.17□□□□□ -2.22
UBXN4-207ENST00000471246 IRX4P78413 519 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 EPS8Q12929 822 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 HSPB3Q12988 150 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 CHAF1BQ13112 559 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 PEX6Q13608 980 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 CDH18Q13634 790 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 NTRK2Q16620 822 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 PHKG1Q16816 387 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 CES4AQ5XG92 561 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 FAM205BPQ63HN1 556 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 KRTAP5-7Q6L8G8 165 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 NOTUMQ6P988 496 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 LEKR1Q6ZMV7 388 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 FRRS1Q6ZNA5 592 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 C4orf50Q6ZRC1 276 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 NUP54Q7Z3B4 507 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 RPAP2Q8IXW5 612 aaPredicted RBP1.17□□□□□ -2.22
UBXN4-207ENST00000471246 MINDY1Q8N5J2 469 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 KLHDC1Q8N7A1 406 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 THAP8Q8NA92 274 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 SLC37A3Q8NCC5 494 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 NUP37Q8NFH4 326 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 OR10S1Q8NGN2 331 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 ATP8B4Q8TF62 1192 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 PRPF31Q8WWY3 499 aaKnown RBP1.17□□□□□ -2.22
UBXN4-207ENST00000471246 PIGBQ92521 554 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 SLAMF9Q96A28 289 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 SKA1Q96BD8 255 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 SLC22A18Q96BI1 424 aa1.17□□□□□ -2.22
UBXN4-207ENST00000471246 NSUN4Q96CB9 384 aaKnown RBP1.17□□□□□ -2.22
UBXN4-207ENST00000471246 SPACA9Q96E40 222 aaPredicted RBP1.17□□□□□ -2.22
UBXN4-207ENST00000471246 THOC1Q96FV9 657 aaKnown RBP1.17□□□□□ -2.22
UBXN4-207ENST00000471246 CALML4Q96GE6 196 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms