RNA–Protein interactions for RNA: ENST00000470045.1

COMMD3-208, Transcript of COMM domain containing 3, humanhuman

TSL 2

Gene COMMD3, Length 662 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-208ENST00000470045 EIF3FO00303 357 aaPredicted RBP13.5□□□□□ -0.25
COMMD3-208ENST00000470045 SLC28A2O43868 658 aa13.5□□□□□ -0.25
COMMD3-208ENST00000470045 RFPL1O75677 317 aa13.5□□□□□ -0.25
COMMD3-208ENST00000470045 HAUS5O94927 633 aa13.5□□□□□ -0.25
COMMD3-208ENST00000470045 CATP04040 527 aaKnown RBP13.5□□□□□ -0.25
COMMD3-208ENST00000470045 CBSLP0DN79 551 aa13.5□□□□□ -0.25
COMMD3-208ENST00000470045 AGXTP21549 392 aa13.5□□□□□ -0.25
COMMD3-208ENST00000470045 CBSP35520 551 aa13.5□□□□□ -0.25
COMMD3-208ENST00000470045 NFKB2Q00653 900 aa13.5□□□□□ -0.25
COMMD3-208ENST00000470045 TIAL1Q01085 375 aaKnown RBP eCLIP13.5□□□□□ -0.25
COMMD3-208ENST00000470045 FASTKQ14296 549 aaKnown RBP13.5□□□□□ -0.25
COMMD3-208ENST00000470045 ZC3H12BQ5HYM0 836 aaKnown RBP13.5□□□□□ -0.25
COMMD3-208ENST00000470045 CYHR1Q6ZMK1 362 aa13.5□□□□□ -0.25
COMMD3-208ENST00000470045 GALNT7Q86SF2 657 aa13.5□□□□□ -0.25
COMMD3-208ENST00000470045 MCATQ8IVS2 390 aaKnown RBP13.5□□□□□ -0.25
COMMD3-208ENST00000470045 IGDCC3Q8IVU1 814 aa13.5□□□□□ -0.25
COMMD3-208ENST00000470045 KLHL7Q8IXQ5 586 aa13.5□□□□□ -0.25
COMMD3-208ENST00000470045 ZNF655Q8N720 491 aaPredicted RBP13.5□□□□□ -0.25
COMMD3-208ENST00000470045 ASB11Q8WXH4 323 aa13.5□□□□□ -0.25
COMMD3-208ENST00000470045 ZUFSPQ96AP4 578 aa13.5□□□□□ -0.25
COMMD3-208ENST00000470045 LRRC39Q96DD0 335 aa13.5□□□□□ -0.25
COMMD3-208ENST00000470045 GPR21Q99679 349 aa13.5□□□□□ -0.25
COMMD3-208ENST00000470045 C17orf62Q9BQA9 187 aa13.5□□□□□ -0.25
COMMD3-208ENST00000470045 TRIM51Q9BSJ1 452 aa13.5□□□□□ -0.25
COMMD3-208ENST00000470045 IARS2Q9NSE4 1012 aaKnown RBP13.5□□□□□ -0.25
COMMD3-208ENST00000470045 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.5□□□□□ -0.25
COMMD3-208ENST00000470045 DHCR7Q9UBM7 475 aaKnown RBP13.5□□□□□ -0.25
COMMD3-208ENST00000470045 HEMK1Q9Y5R4 338 aaPredicted RBP13.5□□□□□ -0.25
COMMD3-208ENST00000470045 ANKRD12Q6UB98 2062 aa13.5□□□□□ -0.25
COMMD3-208ENST00000470045 OR2A25A4D2G3 310 aa13.49□□□□□ -0.25
COMMD3-208ENST00000470045 C9J4A7 227 aa13.49□□□□□ -0.25
COMMD3-208ENST00000470045 MKRN2OSH3BPM6 223 aa13.49□□□□□ -0.25
COMMD3-208ENST00000470045 GFYI3L273 518 aa13.49□□□□□ -0.25
COMMD3-208ENST00000470045 TTI1O43156 1089 aa13.49□□□□□ -0.25
COMMD3-208ENST00000470045 CTSVO60911 334 aa13.49□□□□□ -0.25
COMMD3-208ENST00000470045 KLF7O75840 302 aaPredicted RBP13.49□□□□□ -0.25
COMMD3-208ENST00000470045 SEC31AO94979 1220 aaKnown RBP13.49□□□□□ -0.25
COMMD3-208ENST00000470045 ONECUT2O95948 504 aa13.49□□□□□ -0.25
COMMD3-208ENST00000470045 ERVK-10P10266 1014 aa13.49□□□□□ -0.25
COMMD3-208ENST00000470045 GABRB3P28472 473 aa13.49□□□□□ -0.25
COMMD3-208ENST00000470045 HSD17B2P37059 387 aa13.49□□□□□ -0.25
COMMD3-208ENST00000470045 CBLBQ13191 982 aa13.49□□□□□ -0.25
COMMD3-208ENST00000470045 CUL1Q13616 776 aa13.49□□□□□ -0.25
COMMD3-208ENST00000470045 NAA25Q14CX7 972 aa13.49□□□□□ -0.25
COMMD3-208ENST00000470045 BBS9Q3SYG4 887 aa13.49□□□□□ -0.25
COMMD3-208ENST00000470045 LACTB2Q53H82 288 aaPredicted RBP13.49□□□□□ -0.25
COMMD3-208ENST00000470045 STEAP4Q687X5 459 aa13.49□□□□□ -0.25
COMMD3-208ENST00000470045 TCTN3Q6NUS6 607 aa13.49□□□□□ -0.25
COMMD3-208ENST00000470045 KIAA0408Q6ZU52 694 aa13.49□□□□□ -0.25
COMMD3-208ENST00000470045 RNF44Q7L0R7 432 aa13.49□□□□□ -0.25
COMMD3-208ENST00000470045 PRICKLE2Q7Z3G6 844 aa13.49□□□□□ -0.25
COMMD3-208ENST00000470045 PDIK1LQ8N165 341 aa13.49□□□□□ -0.25
COMMD3-208ENST00000470045 GABPB2Q8TAK5 448 aaPredicted RBP13.49□□□□□ -0.25
COMMD3-208ENST00000470045 SMPDL3AQ92484 453 aa13.49□□□□□ -0.25
COMMD3-208ENST00000470045 DLG3Q92796 817 aa13.49□□□□□ -0.25
COMMD3-208ENST00000470045 INPP5DQ92835 1189 aa13.49□□□□□ -0.25
COMMD3-208ENST00000470045 CERS2Q96G23 380 aa13.49□□□□□ -0.25
COMMD3-208ENST00000470045 PKP4Q99569 1192 aa13.49□□□□□ -0.25
COMMD3-208ENST00000470045 MIPEPQ99797 713 aa13.49□□□□□ -0.25
COMMD3-208ENST00000470045 NDC1Q9BTX1 674 aa13.49□□□□□ -0.25
COMMD3-208ENST00000470045 TRIM55Q9BYV6 548 aa13.49□□□□□ -0.25
COMMD3-208ENST00000470045 PADI2Q9Y2J8 665 aa13.49□□□□□ -0.25
COMMD3-208ENST00000470045 TEX264Q9Y6I9 313 aa13.49□□□□□ -0.25
COMMD3-208ENST00000470045 MDC1Q14676 2089 aaKnown RBP13.49□□□□□ -0.25
COMMD3-208ENST00000470045 FITM1A5D6W6 292 aa13.48□□□□□ -0.25
COMMD3-208ENST00000470045 NRP2O60462 931 aa13.48□□□□□ -0.25
COMMD3-208ENST00000470045 CNOT3O75175 753 aaKnown RBP13.48□□□□□ -0.25
COMMD3-208ENST00000470045 VPS26AO75436 327 aa13.48□□□□□ -0.25
COMMD3-208ENST00000470045 SLC16A8O95907 504 aa13.48□□□□□ -0.25
COMMD3-208ENST00000470045 ITGAXP20702 1163 aa13.48□□□□□ -0.25
COMMD3-208ENST00000470045 ELK3P41970 407 aa13.48□□□□□ -0.25
COMMD3-208ENST00000470045 SKIV2L2P42285 1042 aaKnown RBP13.48□□□□□ -0.25
COMMD3-208ENST00000470045 PAFAH1B1P43034 410 aa13.48□□□□□ -0.25
COMMD3-208ENST00000470045 ITGA8P53708 1063 aa13.48□□□□□ -0.25
COMMD3-208ENST00000470045 ARSFP54793 590 aa13.48□□□□□ -0.25
COMMD3-208ENST00000470045 YBX1P67809 324 aaKnown RBP13.48□□□□□ -0.25
COMMD3-208ENST00000470045 DCDP81605 110 aaKnown RBP13.48□□□□□ -0.25
COMMD3-208ENST00000470045 FRG1Q14331 258 aaKnown RBP13.48□□□□□ -0.25
COMMD3-208ENST00000470045 HIF1AQ16665 826 aa13.48□□□□□ -0.25
COMMD3-208ENST00000470045 NKAIN1Q4KMZ8 207 aa13.48□□□□□ -0.25
COMMD3-208ENST00000470045 TCTE1Q5JU00 501 aa13.48□□□□□ -0.25
COMMD3-208ENST00000470045 C1orf189Q5VU69 101 aa13.48□□□□□ -0.25
COMMD3-208ENST00000470045 FAM69BQ5VUD6 431 aa13.48□□□□□ -0.25
COMMD3-208ENST00000470045 YOD1Q5VVQ6 348 aaPredicted RBP13.48□□□□□ -0.25
COMMD3-208ENST00000470045 CPZQ66K79 652 aa13.48□□□□□ -0.25
COMMD3-208ENST00000470045 MRPL14Q6P1L8 145 aaKnown RBP13.48□□□□□ -0.25
COMMD3-208ENST00000470045 ATG14Q6ZNE5 492 aa13.48□□□□□ -0.25
COMMD3-208ENST00000470045 LRRC56Q8IYG6 542 aaPredicted RBP13.48□□□□□ -0.25
COMMD3-208ENST00000470045 CPNE9Q8IYJ1 553 aa13.48□□□□□ -0.25
COMMD3-208ENST00000470045 ZNF480Q8WV37 535 aa13.48□□□□□ -0.25
COMMD3-208ENST00000470045 SNF8Q96H20 258 aa13.48□□□□□ -0.25
COMMD3-208ENST00000470045 PWWP2AQ96N64 755 aa13.48□□□□□ -0.25
COMMD3-208ENST00000470045 MLXIPLQ9NP71 852 aa13.48□□□□□ -0.25
COMMD3-208ENST00000470045 SLC6A20Q9NP91 592 aa13.48□□□□□ -0.25
COMMD3-208ENST00000470045 ZNF71Q9NQZ8 489 aaPredicted RBP13.48□□□□□ -0.25
COMMD3-208ENST00000470045 SLC22A11Q9NSA0 550 aa13.48□□□□□ -0.25
COMMD3-208ENST00000470045 TXLNGQ9NUQ3 528 aa13.48□□□□□ -0.25
COMMD3-208ENST00000470045 ANKMY1Q9P2S6 941 aa13.48□□□□□ -0.25
COMMD3-208ENST00000470045 ANAPC2Q9UJX6 822 aa13.48□□□□□ -0.25
COMMD3-208ENST00000470045 TLK1Q9UKI8 766 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms