RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 C2orf73Q8N5S3 287 aaPredicted RBP17.57■□□□□ 0.4
SMC4-211ENST00000469858 OR1E3Q8WZA6 343 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 SCARF2Q96GP6 870 aaPredicted RBP17.57■□□□□ 0.4
SMC4-211ENST00000469858 OR2M4Q96R27 311 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 NDE1Q9NXR1 346 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 DYRK1BQ9Y463 629 aa17.57■□□□□ 0.4
SMC4-211ENST00000469858 MRASO14807 208 aa17.56■□□□□ 0.4
SMC4-211ENST00000469858 SLC22A3O75751 556 aa17.56■□□□□ 0.4
SMC4-211ENST00000469858 NPPBP16860 134 aa17.56■□□□□ 0.4
SMC4-211ENST00000469858 CAPN3P20807 821 aa17.56■□□□□ 0.4
SMC4-211ENST00000469858 VARSP26640 1264 aaKnown RBP17.56■□□□□ 0.4
SMC4-211ENST00000469858 HTR1BP28222 390 aa17.56■□□□□ 0.4
SMC4-211ENST00000469858 GRIK2Q13002 908 aa17.56■□□□□ 0.4
SMC4-211ENST00000469858 TCEA2Q15560 299 aa17.56■□□□□ 0.4
SMC4-211ENST00000469858 SNCBQ16143 134 aa17.56■□□□□ 0.4
SMC4-211ENST00000469858 VPS26BQ4G0F5 336 aa17.56■□□□□ 0.4
SMC4-211ENST00000469858 THEMIS2Q5TEJ8 643 aa17.56■□□□□ 0.4
SMC4-211ENST00000469858 GRHL2Q6ISB3 625 aa17.56■□□□□ 0.4
SMC4-211ENST00000469858 CYP20A1Q6UW02 462 aa17.56■□□□□ 0.4
SMC4-211ENST00000469858 RD3Q7Z3Z2 195 aa17.56■□□□□ 0.4
SMC4-211ENST00000469858 RNF175Q8N4F7 328 aa17.56■□□□□ 0.4
SMC4-211ENST00000469858 WDR92Q96MX6 357 aa17.56■□□□□ 0.4
SMC4-211ENST00000469858 INSM2Q96T92 566 aaPredicted RBP17.56■□□□□ 0.4
SMC4-211ENST00000469858 NRTNQ99748 197 aa17.56■□□□□ 0.4
SMC4-211ENST00000469858 IMP3Q9NV31 184 aaKnown RBP17.56■□□□□ 0.4
SMC4-211ENST00000469858 GPRC5BQ9NZH0 403 aa17.56■□□□□ 0.4
SMC4-211ENST00000469858 SH2B3Q9UQQ2 575 aa17.56■□□□□ 0.4
SMC4-211ENST00000469858 FAM170BA6NMN3 283 aa17.55■□□□□ 0.4
SMC4-211ENST00000469858 PDZK1P1A8MUH7 402 aa17.55■□□□□ 0.4
SMC4-211ENST00000469858 SORBS2O94875 1100 aaKnown RBP17.55■□□□□ 0.4
SMC4-211ENST00000469858 IGHV4-34P06331 123 aa17.55■□□□□ 0.4
SMC4-211ENST00000469858 IDSP22304 550 aa17.55■□□□□ 0.4
SMC4-211ENST00000469858 HNF4AP41235 474 aa17.55■□□□□ 0.4
SMC4-211ENST00000469858 MAD2L1Q13257 205 aaPredicted RBP17.55■□□□□ 0.4
SMC4-211ENST00000469858 FZD5Q13467 585 aa17.55■□□□□ 0.4
SMC4-211ENST00000469858 LRP8Q14114 963 aa17.55■□□□□ 0.4
SMC4-211ENST00000469858 BLOC1S3Q6QNY0 202 aa17.55■□□□□ 0.4
SMC4-211ENST00000469858 LAYNQ6UX15 382 aa17.55■□□□□ 0.4
SMC4-211ENST00000469858 BNC2Q6ZN30 1099 aaPredicted RBP17.55■□□□□ 0.4
SMC4-211ENST00000469858 ADHFE1Q8IWW8 467 aa17.55■□□□□ 0.4
SMC4-211ENST00000469858 TBC1D21Q8IYX1 336 aa17.55■□□□□ 0.4
SMC4-211ENST00000469858 CCDC124Q96CT7 223 aaKnown RBP17.55■□□□□ 0.4
SMC4-211ENST00000469858 FERD3LQ96RJ6 166 aa17.55■□□□□ 0.4
SMC4-211ENST00000469858 TPSD1Q9BZJ3 242 aa17.55■□□□□ 0.4
SMC4-211ENST00000469858 C1orf109Q9NX04 203 aa17.55■□□□□ 0.4
SMC4-211ENST00000469858 ZIM2Q9NZV7 527 aa17.55■□□□□ 0.4
SMC4-211ENST00000469858 PACSIN3Q9UKS6 424 aa17.55■□□□□ 0.4
SMC4-211ENST00000469858 EIF3LQ9Y262 564 aaKnown RBP17.55■□□□□ 0.4
SMC4-211ENST00000469858 BBIP1A8MTZ0 92 aa17.55■□□□□ 0.4
SMC4-211ENST00000469858 ANGPT2O15123 496 aa17.55■□□□□ 0.4
SMC4-211ENST00000469858 KCNJ13O60928 360 aa17.55■□□□□ 0.4
SMC4-211ENST00000469858 HNRNPH1P31943 449 aaKnown RBP17.55■□□□□ 0.4
SMC4-211ENST00000469858 THOP1P52888 689 aa17.55■□□□□ 0.4
SMC4-211ENST00000469858 KCNK10P57789 538 aa17.55■□□□□ 0.4
SMC4-211ENST00000469858 DDX39BQ13838 428 aaKnown RBP17.55■□□□□ 0.4
SMC4-211ENST00000469858 CATSPEREQ5SY80 951 aa17.55■□□□□ 0.4
SMC4-211ENST00000469858 C1orf146Q5VVC0 180 aa17.55■□□□□ 0.4
SMC4-211ENST00000469858 KIAA0895LQ68EN5 471 aa17.55■□□□□ 0.4
SMC4-211ENST00000469858 SLCO4C1Q6ZQN7 724 aa17.55■□□□□ 0.4
SMC4-211ENST00000469858 ZFAND4Q86XD8 727 aa17.55■□□□□ 0.4
SMC4-211ENST00000469858 SIX5Q8N196 739 aa17.55■□□□□ 0.4
SMC4-211ENST00000469858 PROKR1Q8TCW9 393 aa17.55■□□□□ 0.4
SMC4-211ENST00000469858 TSACCQ96A04 125 aaPredicted RBP17.55■□□□□ 0.4
SMC4-211ENST00000469858 GPR174Q9BXC1 333 aa17.55■□□□□ 0.4
SMC4-211ENST00000469858 PRM3Q9NNZ6 103 aa17.55■□□□□ 0.4
SMC4-211ENST00000469858 WNT16Q9UBV4 365 aa17.55■□□□□ 0.4
SMC4-211ENST00000469858 PRPF19Q9UMS4 504 aaKnown RBP17.55■□□□□ 0.4
SMC4-211ENST00000469858 PRR19A6NJB7 356 aa17.54■□□□□ 0.4
SMC4-211ENST00000469858 PI15O43692 258 aa17.54■□□□□ 0.4
SMC4-211ENST00000469858 RSL1D1O76021 490 aaKnown RBP17.54■□□□□ 0.4
SMC4-211ENST00000469858 DPP6P42658 865 aa17.54■□□□□ 0.4
SMC4-211ENST00000469858 STARD6P59095 220 aa17.54■□□□□ 0.4
SMC4-211ENST00000469858 ZP2Q05996 745 aa17.54■□□□□ 0.4
SMC4-211ENST00000469858 PCDH1Q08174 1060 aa17.54■□□□□ 0.4
SMC4-211ENST00000469858 RCAN2Q14206 197 aa17.54■□□□□ 0.4
SMC4-211ENST00000469858 CLCA4Q14CN2 919 aa17.54■□□□□ 0.4
SMC4-211ENST00000469858 SMU1Q2TAY7 513 aa17.54■□□□□ 0.4
SMC4-211ENST00000469858 PRAMEF14Q5SWL7 426 aa17.54■□□□□ 0.4
SMC4-211ENST00000469858 C6orf163Q5TEZ5 329 aa17.54■□□□□ 0.4
SMC4-211ENST00000469858 PRAMEF13Q5VWM6 474 aa17.54■□□□□ 0.4
SMC4-211ENST00000469858 PGM2L1Q6PCE3 622 aa17.54■□□□□ 0.4
SMC4-211ENST00000469858 NET1Q7Z628 596 aaPredicted RBP17.54■□□□□ 0.4
SMC4-211ENST00000469858 RETREG3Q86VR2 466 aa17.54■□□□□ 0.4
SMC4-211ENST00000469858 HPS6Q86YV9 775 aa17.54■□□□□ 0.4
SMC4-211ENST00000469858 FRMD1Q8N878 549 aa17.54■□□□□ 0.4
SMC4-211ENST00000469858 TMEM145Q8NBT3 493 aa17.54■□□□□ 0.4
SMC4-211ENST00000469858 WDR20Q8TBZ3 569 aa17.54■□□□□ 0.4
SMC4-211ENST00000469858 RLN3Q8WXF3 142 aa17.54■□□□□ 0.4
SMC4-211ENST00000469858 SPDL1Q96EA4 605 aa17.54■□□□□ 0.4
SMC4-211ENST00000469858 SHDQ96IW2 340 aa17.54■□□□□ 0.4
SMC4-211ENST00000469858 CDRT15Q96T59 188 aa17.54■□□□□ 0.4
SMC4-211ENST00000469858 MTERF1Q99551 399 aaKnown RBP17.54■□□□□ 0.4
SMC4-211ENST00000469858 PRDM8Q9NQV8 689 aa17.54■□□□□ 0.4
SMC4-211ENST00000469858 OR52A4PA6NMU1 304 aa17.53■□□□□ 0.4
SMC4-211ENST00000469858 APBB3O95704 486 aa17.53■□□□□ 0.4
SMC4-211ENST00000469858 ERGP11308 486 aa17.53■□□□□ 0.4
SMC4-211ENST00000469858 CCND1P24385 295 aa17.53■□□□□ 0.4
SMC4-211ENST00000469858 IL12AP29459 219 aa17.53■□□□□ 0.4
SMC4-211ENST00000469858 ZFP36L2P47974 494 aaKnown RBP17.53■□□□□ 0.4
SMC4-211ENST00000469858 POLR2JP52435 117 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms