RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 FOXD2O60548 495 aaPredicted RBP9.18□□□□□ -0.94
TOP3A-203ENST00000469739 ZBTB11O95625 1053 aaPredicted RBP9.18□□□□□ -0.94
TOP3A-203ENST00000469739 POP4O95707 220 aaKnown RBP9.18□□□□□ -0.94
TOP3A-203ENST00000469739 NTRK1P04629 796 aa9.18□□□□□ -0.94
TOP3A-203ENST00000469739 ABCB1P08183 1280 aaPredicted RBP9.18□□□□□ -0.94
TOP3A-203ENST00000469739 OR56A5P0C7T3 313 aa9.18□□□□□ -0.94
TOP3A-203ENST00000469739 PRR35P0CG20 571 aa9.18□□□□□ -0.94
TOP3A-203ENST00000469739 BCKDHAP12694 445 aa9.18□□□□□ -0.94
TOP3A-203ENST00000469739 AQP1P29972 269 aa9.18□□□□□ -0.94
TOP3A-203ENST00000469739 ATP4BP51164 291 aa9.18□□□□□ -0.94
TOP3A-203ENST00000469739 ARPC4P59998 168 aa9.18□□□□□ -0.94
TOP3A-203ENST00000469739 SLC7A9P82251 487 aa9.18□□□□□ -0.94
TOP3A-203ENST00000469739 TRAP1Q12931 704 aaKnown RBP9.18□□□□□ -0.94
TOP3A-203ENST00000469739 CHIT1Q13231 466 aa9.18□□□□□ -0.94
TOP3A-203ENST00000469739 NAE1Q13564 534 aa9.18□□□□□ -0.94
TOP3A-203ENST00000469739 PCBP2Q15366 365 aaKnown RBP eCLIP9.18□□□□□ -0.94
TOP3A-203ENST00000469739 ZNF829Q3KNS6 432 aaPredicted RBP9.18□□□□□ -0.94
TOP3A-203ENST00000469739 IER5LQ5T953 404 aa9.18□□□□□ -0.94
TOP3A-203ENST00000469739 NIPAL1Q6NVV3 410 aa9.18□□□□□ -0.94
TOP3A-203ENST00000469739 DOK6Q6PKX4 331 aa9.18□□□□□ -0.94
TOP3A-203ENST00000469739 ANGPTL8Q6UXH0 198 aa9.18□□□□□ -0.94
TOP3A-203ENST00000469739 DLEU7Q6UYE1 221 aa9.18□□□□□ -0.94
TOP3A-203ENST00000469739 SLC13A3Q8WWT9 602 aa9.18□□□□□ -0.94
TOP3A-203ENST00000469739 PLEKHA8Q96JA3 519 aa9.18□□□□□ -0.94
TOP3A-203ENST00000469739 TOX2Q96NM4 488 aa9.18□□□□□ -0.94
TOP3A-203ENST00000469739 ZBTB18Q99592 522 aa9.18□□□□□ -0.94
TOP3A-203ENST00000469739 NUSAP1Q9BXS6 441 aaKnown RBP9.18□□□□□ -0.94
TOP3A-203ENST00000469739 NDEL1Q9GZM8 345 aa9.18□□□□□ -0.94
TOP3A-203ENST00000469739 SPHK2Q9NRA0 654 aa9.18□□□□□ -0.94
TOP3A-203ENST00000469739 DUS2Q9NX74 493 aaKnown RBP9.18□□□□□ -0.94
TOP3A-203ENST00000469739 PKD2L2Q9NZM6 624 aa9.18□□□□□ -0.94
TOP3A-203ENST00000469739 AASSQ9UDR5 926 aa9.18□□□□□ -0.94
TOP3A-203ENST00000469739 CFAP20Q9Y6A4 193 aaKnown RBP9.18□□□□□ -0.94
TOP3A-203ENST00000469739 SOBPA7XYQ1 873 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 FADS2P1A8MWK0 482 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 GFRA2O00451 464 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 CNOT3O75175 753 aaKnown RBP9.17□□□□□ -0.94
TOP3A-203ENST00000469739 EEDO75530 441 aaKnown RBP9.17□□□□□ -0.94
TOP3A-203ENST00000469739 CLDN9O95484 217 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 PGRP06401 933 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 CEBPBP17676 345 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 EPORP19235 508 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 PPM1AP35813 382 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 CDKN2CP42773 168 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 PHC1P78364 1004 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 OR4F3Q6IEY1 312 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 OGFOD2Q6N063 350 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 C16orf87Q6PH81 154 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 LILRA6Q6PI73 481 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 CRTC3Q6UUV7 619 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 ZNF783Q6ZMS7 281 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 CCDC149Q6ZUS6 474 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 HID1Q8IV36 788 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 CATSPER1Q8NEC5 780 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 DCUN1D5Q9BTE7 237 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 SMURF2Q9HAU4 748 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 GPRC5BQ9NZH0 403 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 SCHIP1Q9P0W5 487 aaPredicted RBP9.17□□□□□ -0.94
TOP3A-203ENST00000469739 ABCD2Q9UBJ2 740 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 RABL2BQ9UNT1 228 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 INVSQ9Y283 1065 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 PTPRSQ13332 1948 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 VPS4BO75351 444 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 ATP1B2P14415 290 aaPredicted RBP9.17□□□□□ -0.94
TOP3A-203ENST00000469739 MSH3P20585 1137 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 EEF1B2P24534 225 aaKnown RBP9.17□□□□□ -0.94
TOP3A-203ENST00000469739 SLC6A11P48066 632 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 EMX2Q04743 252 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 STARD3Q14849 445 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 SYTL3Q4VX76 610 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 SULT1C3Q6IMI6 304 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 TTC33Q6PID6 262 aaPredicted RBP9.17□□□□□ -0.94
TOP3A-203ENST00000469739 PDPRQ8NCN5 879 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 OR2T12Q8NG77 320 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 FAM162AQ96A26 154 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 THAP11Q96EK4 314 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 C11orf49Q9H6J7 331 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 KCTD5Q9NXV2 234 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 SLC25A37Q9NYZ2 338 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 ADGRE2Q9UHX3 823 aa9.17□□□□□ -0.94
TOP3A-203ENST00000469739 MRPS23Q9Y3D9 190 aaKnown RBP9.17□□□□□ -0.94
TOP3A-203ENST00000469739 GBF1Q92538 1859 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 OTOL1A6NHN0 477 aaPredicted RBP9.16□□□□□ -0.94
TOP3A-203ENST00000469739 TMX2-CTNND1H3BSU7 103 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 CLOCKO15516 846 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 SOCS5O75159 536 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 MOSPD3O75425 235 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 GMNNO75496 209 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 ZNF682O95780 498 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 NNMTP40261 264 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 ALDH3B2P48448 385 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 GSSP48637 474 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 HSPA13P48723 471 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 IRF8Q02556 426 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 PIGFQ07326 219 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 CAMK2BQ13554 666 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 XKR6Q5GH73 641 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 CACHD1Q5VU97 1274 aa9.16□□□□□ -0.94
TOP3A-203ENST00000469739 FAM109BQ6ICB4 259 aaPredicted RBP9.16□□□□□ -0.94
TOP3A-203ENST00000469739 TRAPPC5Q8IUR0 188 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms