RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 GPR89BP0CG08 455 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 IGFBP2P18065 325 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 PDHA2P29803 388 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 OR1D4P47884 311 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 ARSEP51690 589 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 EFNA3P52797 238 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 DCDC1P59894 354 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 ARG2P78540 354 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 SLC7A5Q01650 507 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 GBE1Q04446 702 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 GALNT2Q10471 571 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 ZBTB17Q13105 803 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 PRKG2Q13237 762 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 CDK5R2Q13319 367 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 DPYSL2Q16555 572 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 FNBP1LQ5T0N5 605 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 ERICH6BQ5W0A0 696 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 NCBP2-AS2Q69YL0 99 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 FCRL6Q6DN72 434 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 ACAD10Q6JQN1 1059 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 VHLLQ6RSH7 139 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 ARHGEF18Q6ZSZ5 1173 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 OVCH1Q7RTY7 1134 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 FGD2Q7Z6J4 655 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 NT5DC3Q86UY8 548 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 HSCBQ8IWL3 235 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 RAVER1Q8IY67 606 aaKnown RBP5.05□□□□□ -1.6
PTPN4-209ENST00000469511 ELOA2Q8IYF1 753 aaPredicted RBP5.05□□□□□ -1.6
PTPN4-209ENST00000469511 BBS5Q8N3I7 341 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 RPRMLQ8N4K4 120 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 MARVELD2Q8N4S9 558 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 DNAJC22Q8N4W6 341 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 DNAAF3Q8N9W5 541 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 WFDC11Q8NEX6 87 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 SPATA22Q8NHS9 363 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 HAS2Q92819 552 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 TP53INP1Q96A56 240 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 ZNF669Q96BR6 464 aaPredicted RBP5.05□□□□□ -1.6
PTPN4-209ENST00000469511 SDCCAG3Q96C92 435 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 HDAC11Q96DB2 347 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 ARSGQ96EG1 525 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 MRFAP1L1Q96HT8 127 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 COX4I2Q96KJ9 171 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 AGAP3Q96P47 875 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 DMRTA2Q96SC8 542 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 MIPEPQ99797 713 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 FOXC2Q99958 501 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 SYT11Q9BT88 431 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 GPR63Q9BZJ6 419 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 C7orf69Q9H7B7 122 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.05□□□□□ -1.6
PTPN4-209ENST00000469511 ABI3Q9P2A4 366 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 NFKBIL1Q9UBC1 381 aaPredicted RBP5.05□□□□□ -1.6
PTPN4-209ENST00000469511 ADAM21Q9UKJ8 722 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 PLEKHA6Q9Y2H5 1048 aa5.05□□□□□ -1.6
PTPN4-209ENST00000469511 ARID1AO14497 2285 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 C17orf113A0A1B0GUU1 675 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 GOLGA6L4A6NEF3 574 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 MGAT4DA6NG13 374 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 EIF3CLB5ME19 914 aaKnown RBP5.04□□□□□ -1.6
PTPN4-209ENST00000469511 NPIPA5E9PKD4 350 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 FAM227AF5H4B4 570 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 PRAMEF2O60811 474 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 RNF8O76064 485 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 RASAL1O95294 804 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 IGHEP01854 428 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 HBQ1P09105 142 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 MSL3P1P0C860 447 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 ITGAMP11215 1152 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 UGT2B7P16662 529 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 AGAP20933 346 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 PEBP1P30086 187 aaKnown RBP5.04□□□□□ -1.6
PTPN4-209ENST00000469511 ARL4AP40617 200 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 SMSP52788 366 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 RPL26P61254 145 aaKnown RBP5.04□□□□□ -1.6
PTPN4-209ENST00000469511 PPP2R2AP63151 447 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 RNF4P78317 190 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 TFF3Q07654 80 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 PRKAA1Q13131 559 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 OLIG2Q13516 323 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 RBBP7Q16576 425 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 TUBB8Q3ZCM7 444 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 GPRC6AQ5T6X5 926 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 FCRLBQ6BAA4 426 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 FAM151BQ6UXP7 276 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 Q6ZPB1 254 aaPredicted RBP5.04□□□□□ -1.6
PTPN4-209ENST00000469511 TTLL10Q6ZVT0 673 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 CXXC5Q7LFL8 322 aaKnown RBP5.04□□□□□ -1.6
PTPN4-209ENST00000469511 ZAR1Q86SH2 424 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 TMEM200AQ86VY9 491 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 DOLPP1Q86YN1 238 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 SPPL2CQ8IUH8 684 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 CFAP206Q8IYR0 622 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 GPR135Q8IZ08 494 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 CARFQ8N187 725 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 TMEM151AQ8N4L1 468 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 OR52E1Q8NGJ3 308 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 AGAP11Q8TF27 550 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 NSMCE1Q8WV22 266 aa5.04□□□□□ -1.6
PTPN4-209ENST00000469511 RNF141Q8WVD5 230 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms