RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 GDF5P43026 501 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 GRK6P43250 576 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 RAB28P51157 221 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 PNLIPRP1P54315 467 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 ALDH18A1P54886 795 aaKnown RBP8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 NFKB2Q00653 900 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 NAE1Q13564 534 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 ZXDCQ2QGD7 858 aaPredicted RBP8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 PTCHD3Q3KNS1 767 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 CRTC2Q53ET0 693 aaPredicted RBP8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 XP32Q5T750 250 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 ANKS6Q68DC2 871 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 SULT1C3Q6IMI6 304 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 GUSBP11Q6P575 273 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 SUSD1Q6UWL2 747 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 RAB44Q7Z6P3 723 aaPredicted RBP8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 SLC22A9Q8IVM8 553 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 NAXDQ8IW45 347 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 TCAIMQ8N3R3 496 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 RAB42Q8N4Z0 105 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 ARFGAP2Q8N6H7 521 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 CCNYL1Q8N7R7 359 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 Q8N9G6 341 aaPredicted RBP8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 SNX31Q8N9S9 440 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 LINC01555Q8NAE3 123 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 OR4E2Q8NGC2 313 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 OR2L8Q8NGY9 312 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 PPP1R14CQ8TAE6 165 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 UBTD2Q8WUN7 234 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 DYDC1Q8WWB3 177 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 ATL1Q8WXF7 558 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 RSC1A1Q92681 617 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 PYCR2Q96C36 320 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 MOCOSQ96EN8 888 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 SLC38A3Q99624 504 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 MENTQ9BUN1 341 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 RAB11FIP5Q9BXF6 653 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 SRMSQ9H3Y6 488 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 SYNDIG1Q9H7V2 258 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 CNOT10Q9H9A5 744 aaKnown RBP8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 INTS9Q9NV88 658 aaKnown RBP8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 LRIT1Q9P2V4 623 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 FTSJ1Q9UET6 329 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 LNPEPQ9UIQ6 1025 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 TMCO1Q9UM00 188 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 PCDHGB2Q9Y5G2 931 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 U3KQA8 63 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 SPTBP11277 2137 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 FAM186AA6NE01 2351 aa8.12□□□□□ -1.11
GAPVD1-213ENST00000469498 GSAPA4D1B5 854 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 OR6C74A6NCV1 312 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 STX16-NPEPL1H3BU86 382 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 BTN3A3O00478 584 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 STX16O14662 325 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 CASC3O15234 703 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 POLR3GO15318 223 aaPredicted RBP8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 NUDT21O43809 227 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 SH3BP5O60239 455 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 IGHA1P01876 353 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 RPS17P08708 135 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 CHRM5P08912 532 aaPredicted RBP8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 ERGP11308 486 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 FGF3P11487 239 aaPredicted RBP8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 TSPAN8P19075 237 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 BGNP21810 368 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 ALDH4A1P30038 563 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 PEBP1P30086 187 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 CCR10P46092 362 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 SLC6A12P48065 614 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 HNMTP50135 292 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 SLC18A1P54219 525 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 PRKAA2P54646 552 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 GYS2P54840 703 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 OR1D5P58170 312 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 PPP1CAP62136 330 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 HERVK_113P63132 956 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 CHI3L2Q15782 390 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 CYP2A13Q16696 494 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 UNC50Q53HI1 259 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 PERM1Q5SV97 790 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 ZNF678Q5SXM1 525 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 THEMIS2Q5TEJ8 643 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 PRAMEF13Q5VWM6 474 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 LIPMQ5VYY2 423 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 TTC19Q6DKK2 380 aaPredicted RBP8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 LRRC70Q7Z2Q7 622 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 EFL1Q7Z2Z2 1120 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 TRIM73Q86UV7 250 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 AMIGO1Q86WK6 493 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 NUDCD3Q8IVD9 361 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 RBM12BQ8IXT5 1001 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 MEIOBQ8N635 442 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 FAM181AQ8N9Y4 354 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 OR56A3Q8NH54 315 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 RHBDD1Q8TEB9 315 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 SH3KBP1Q96B97 665 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 CCDC126Q96EE4 140 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 L3HYPDHQ96EM0 354 aa8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 CNDP2Q96KP4 475 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-213ENST00000469498 NSUN5Q96P11 429 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms