RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 CRADDP78560 199 aa11.72□□□□□ -0.53
HDAC3-204ENST00000469207 ACVR1Q04771 509 aa11.72□□□□□ -0.53
HDAC3-204ENST00000469207 SNX1Q13596 522 aa11.72□□□□□ -0.53
HDAC3-204ENST00000469207 GRM7Q14831 915 aa11.72□□□□□ -0.53
HDAC3-204ENST00000469207 TUBB8Q3ZCM7 444 aa11.72□□□□□ -0.53
HDAC3-204ENST00000469207 ZC3H12BQ5HYM0 836 aaKnown RBP11.72□□□□□ -0.53
HDAC3-204ENST00000469207 SP5Q6BEB4 398 aaPredicted RBP11.72□□□□□ -0.53
HDAC3-204ENST00000469207 FBXO42Q6P3S6 717 aa11.72□□□□□ -0.53
HDAC3-204ENST00000469207 FJX1Q86VR8 437 aa11.72□□□□□ -0.53
HDAC3-204ENST00000469207 DCUN1D3Q8IWE4 304 aa11.72□□□□□ -0.53
HDAC3-204ENST00000469207 SHISA5Q8N114 240 aa11.72□□□□□ -0.53
HDAC3-204ENST00000469207 OR1N1Q8NGS0 311 aa11.72□□□□□ -0.53
HDAC3-204ENST00000469207 STT3BQ8TCJ2 826 aa11.72□□□□□ -0.53
HDAC3-204ENST00000469207 DENND1AQ8TEH3 1009 aa11.72□□□□□ -0.53
HDAC3-204ENST00000469207 C1orf54Q8WWF1 131 aa11.72□□□□□ -0.53
HDAC3-204ENST00000469207 FKBP10Q96AY3 582 aa11.72□□□□□ -0.53
HDAC3-204ENST00000469207 SLC22A18Q96BI1 424 aa11.72□□□□□ -0.53
HDAC3-204ENST00000469207 FAM136AQ96C01 138 aa11.72□□□□□ -0.53
HDAC3-204ENST00000469207 ZNF285Q96NJ3 590 aa11.72□□□□□ -0.53
HDAC3-204ENST00000469207 PANX2Q96RD6 677 aa11.72□□□□□ -0.53
HDAC3-204ENST00000469207 SLC26A1Q9H2B4 701 aa11.72□□□□□ -0.53
HDAC3-204ENST00000469207 WDR54Q9H977 334 aa11.72□□□□□ -0.53
HDAC3-204ENST00000469207 ZNF160Q9HCG1 818 aa11.72□□□□□ -0.53
HDAC3-204ENST00000469207 DIDO1Q9BTC0 2240 aaKnown RBP11.72□□□□□ -0.53
HDAC3-204ENST00000469207 ZGRF1Q86YA3 2104 aa11.72□□□□□ -0.53
HDAC3-204ENST00000469207 LRBAP50851 2863 aa11.72□□□□□ -0.53
HDAC3-204ENST00000469207 SVILO95425 2214 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 A0A1W2PPV9 198 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 FITM1A5D6W6 292 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 CD3EAPO15446 510 aaKnown RBP11.71□□□□□ -0.53
HDAC3-204ENST00000469207 LIASO43766 372 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 KDM1AO60341 852 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 WISP2O76076 250 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 SUN1O94901 812 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 APOA4P06727 396 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 ZGLP1P0C6A0 271 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 PIM1P11309 404 aaPredicted RBP11.71□□□□□ -0.53
HDAC3-204ENST00000469207 TSFMP43897 325 aaKnown RBP11.71□□□□□ -0.53
HDAC3-204ENST00000469207 ZNF75DP51815 510 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 PRAMEP78395 509 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 OASLQ15646 514 aaKnown RBP11.71□□□□□ -0.53
HDAC3-204ENST00000469207 ZRSR2Q15696 482 aaKnown RBP11.71□□□□□ -0.53
HDAC3-204ENST00000469207 TCTE1Q5JU00 501 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 ATG9BQ674R7 924 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 FAAH2Q6GMR7 532 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 PTRHD1Q6GMV3 140 aaKnown RBP11.71□□□□□ -0.53
HDAC3-204ENST00000469207 CNSTQ6PJW8 725 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 CES3Q6UWW8 571 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 UNC5DQ6UXZ4 953 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 KIAA1328Q86T90 577 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 TICAM1Q8IUC6 712 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 UBL4BQ8N7F7 174 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 TTC29Q8NA56 475 aaPredicted RBP11.71□□□□□ -0.53
HDAC3-204ENST00000469207 OR2A1Q8NGT9 310 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 SKA2Q8WVK7 121 aaPredicted RBP11.71□□□□□ -0.53
HDAC3-204ENST00000469207 PSMF1Q92530 271 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 ZUFSPQ96AP4 578 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 NACC2Q96BF6 587 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 CALR3Q96L12 384 aaKnown RBP11.71□□□□□ -0.53
HDAC3-204ENST00000469207 TAAR6Q96RI8 345 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 TTC1Q99614 292 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 DESI2Q9BSY9 194 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 CRB3Q9BUF7 120 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 ACAT2Q9BWD1 397 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 P2RY12Q9H244 342 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 ZNF304Q9HCX3 659 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 RAB6BQ9NRW1 208 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 CATSPERZQ9NTU4 200 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 PTGFRNQ9P2B2 879 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 GALPQ9UBC7 116 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 ANAPC5Q9UJX4 755 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 TCAF1Q9Y4C2 921 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 NUP210LQ5VU65 1888 aa11.71□□□□□ -0.53
HDAC3-204ENST00000469207 PCM1Q15154 2024 aa11.7□□□□□ -0.54
HDAC3-204ENST00000469207 TARM1B6A8C7 271 aa11.7□□□□□ -0.54
HDAC3-204ENST00000469207 GOLGA8KD6RF30 607 aa11.7□□□□□ -0.54
HDAC3-204ENST00000469207 E7EVH7 732 aa11.7□□□□□ -0.54
HDAC3-204ENST00000469207 GOLGA8TH3BQL2 631 aa11.7□□□□□ -0.54
HDAC3-204ENST00000469207 PRMT5O14744 637 aaPredicted RBP11.7□□□□□ -0.54
HDAC3-204ENST00000469207 SRPX2O60687 465 aaPredicted RBP11.7□□□□□ -0.54
HDAC3-204ENST00000469207 F7P08709 466 aaPredicted RBP11.7□□□□□ -0.54
HDAC3-204ENST00000469207 EDN3P14138 238 aa11.7□□□□□ -0.54
HDAC3-204ENST00000469207 PTMSP20962 102 aa11.7□□□□□ -0.54
HDAC3-204ENST00000469207 NMBRP28336 390 aa11.7□□□□□ -0.54
HDAC3-204ENST00000469207 TNFRSF8P28908 595 aa11.7□□□□□ -0.54
HDAC3-204ENST00000469207 STIP1P31948 543 aaKnown RBP11.7□□□□□ -0.54
HDAC3-204ENST00000469207 KCNK10P57789 538 aa11.7□□□□□ -0.54
HDAC3-204ENST00000469207 SESN2P58004 480 aaPredicted RBP11.7□□□□□ -0.54
HDAC3-204ENST00000469207 SNRPNP63162 240 aaKnown RBP11.7□□□□□ -0.54
HDAC3-204ENST00000469207 MFAP5Q13361 173 aa11.7□□□□□ -0.54
HDAC3-204ENST00000469207 TLR1Q15399 786 aa11.7□□□□□ -0.54
HDAC3-204ENST00000469207 FAM214AQ32MH5 1076 aa11.7□□□□□ -0.54
HDAC3-204ENST00000469207 IRAK1BP1Q5VVH5 260 aa11.7□□□□□ -0.54
HDAC3-204ENST00000469207 B3GNTL1Q67FW5 361 aaPredicted RBP11.7□□□□□ -0.54
HDAC3-204ENST00000469207 SUSD1Q6UWL2 747 aa11.7□□□□□ -0.54
HDAC3-204ENST00000469207 ISLR2Q6UXK2 745 aa11.7□□□□□ -0.54
HDAC3-204ENST00000469207 SIRT6Q8N6T7 355 aa11.7□□□□□ -0.54
HDAC3-204ENST00000469207 OR2L3Q8NG85 312 aa11.7□□□□□ -0.54
HDAC3-204ENST00000469207 RAD51AP1Q96B01 352 aa11.7□□□□□ -0.54
HDAC3-204ENST00000469207 MIEF2Q96C03 454 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms