RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 NT5C1B-RDH14C9J2C7 533 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 E5RI56 91 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 F5H423 210 aaPredicted RBP4.74□□□□□ -1.65
SF3B1-207ENST00000468925 TMX2-CTNND1H3BSU7 103 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 KCNK1O00180 336 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 SUSD5O60279 629 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 RAD1O60671 282 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 CST8O60676 142 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 PLA2G6O60733 806 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 SLC43A1O75387 559 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 ITGA10O75578 1167 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 LYPLA1O75608 230 aaPredicted RBP4.74□□□□□ -1.65
SF3B1-207ENST00000468925 TMEM63AO94886 807 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 KLHL18O94889 574 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 LRIG2O94898 1065 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 PAPSS2O95340 614 aaPredicted RBP4.74□□□□□ -1.65
SF3B1-207ENST00000468925 MATN4O95460 622 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 ANGPTL1O95841 491 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 LALBAP00709 142 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 RAF1P04049 648 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 IL6P05231 212 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 POLBP06746 335 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 PROS1P07225 676 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 SERPINF2P08697 491 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 OR56A5P0C7T3 313 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 ADORA3P0DMS8 318 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 PRKAR1AP10644 381 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 RPS2P15880 293 aaKnown RBP4.74□□□□□ -1.65
SF3B1-207ENST00000468925 CD36P16671 472 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 NELFEP18615 380 aaKnown RBP4.74□□□□□ -1.65
SF3B1-207ENST00000468925 CD58P19256 250 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 DDCP20711 480 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 CHMP24386 653 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 KDELR1P24390 212 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 POU1F1P28069 291 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 GGT5P36269 586 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 POLR2IP36954 125 aaKnown RBP4.74□□□□□ -1.65
SF3B1-207ENST00000468925 BUD31P41223 144 aaPredicted RBP4.74□□□□□ -1.65
SF3B1-207ENST00000468925 DPP6P42658 865 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 CCT3P49368 545 aaKnown RBP4.74□□□□□ -1.65
SF3B1-207ENST00000468925 VEGFCP49767 419 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 MEOX2P50222 304 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 GPR143P51810 404 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 ARHGDIBP52566 201 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 TAS2R40P59535 323 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 PSMC5P62195 406 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 YWHAEP62258 255 aaKnown RBP4.74□□□□□ -1.65
SF3B1-207ENST00000468925 RPS26P62854 115 aaKnown RBP4.74□□□□□ -1.65
SF3B1-207ENST00000468925 RING1Q06587 406 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 ZNF267Q14586 743 aaPredicted RBP4.74□□□□□ -1.65
SF3B1-207ENST00000468925 EIF4HQ15056 248 aaKnown RBP4.74□□□□□ -1.65
SF3B1-207ENST00000468925 NOMO1Q15155 1222 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 PCBP1Q15365 356 aaKnown RBP eCLIP4.74□□□□□ -1.65
SF3B1-207ENST00000468925 TBCEQ15813 527 aaPredicted RBP4.74□□□□□ -1.65
SF3B1-207ENST00000468925 DUSP6Q16828 381 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 CYP51A1Q16850 503 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 KIF19Q2TAC6 998 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 HSDL1Q3SXM5 330 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 FUT11Q495W5 492 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 TRIM60Q495X7 471 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 CCDC157Q569K6 752 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 COLEC12Q5KU26 742 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 SFRP5Q5T4F7 317 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 HACD4Q5VWC8 232 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 ANKRD22Q5VYY1 191 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 CES4AQ5XG92 561 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 ZNF772Q68DY9 489 aaPredicted RBP4.74□□□□□ -1.65
SF3B1-207ENST00000468925 ARHGAP17Q68EM7 881 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 GPR139Q6DWJ6 353 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 ZNF470Q6ECI4 717 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 OR7E24Q6IFN5 339 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 PMF1Q6P1K2 205 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 DNAJC24Q6P3W2 148 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 ISLR2Q6UXK2 745 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 NSMFQ6X4W1 530 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 ZCCHC23Q6ZST2 131 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 C1orf186Q6ZWK4 172 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 PIWIL3Q7Z3Z3 882 aaKnown RBP4.74□□□□□ -1.65
SF3B1-207ENST00000468925 COMMD7Q86VX2 200 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 MIB1Q86YT6 1006 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 TMEM151BQ8IW70 566 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 SYTL1Q8IYJ3 562 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 EID3Q8N140 333 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 DPP10Q8N608 796 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 DUSP18Q8NEJ0 188 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 ZMIZ2Q8NF64 920 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 DNAJB8Q8NHS0 232 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 ZSCAN18Q8TBC5 510 aaPredicted RBP4.74□□□□□ -1.65
SF3B1-207ENST00000468925 BPIFB1Q8TDL5 484 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 ASB15Q8WXK1 588 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 ST8SIA4Q92187 359 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 MYLPFQ96A32 169 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 KIAA1191Q96A73 305 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 PTERQ96BW5 349 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 SLC47A1Q96FL8 570 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 FAM89AQ96GI7 184 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 OR52B2Q96RD2 323 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 DIRC2Q96SL1 478 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 C12orf57Q99622 126 aa4.74□□□□□ -1.65
SF3B1-207ENST00000468925 ACO2Q99798 780 aaKnown RBP4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms