RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 TAF10Q12962 218 aa3.84□□□□□ -1.79
LRCH3-211ENST00000466054 ZNF273Q14593 569 aa3.84□□□□□ -1.79
LRCH3-211ENST00000466054 ZNF876PQ49A33 203 aa3.84□□□□□ -1.79
LRCH3-211ENST00000466054 TCTE1Q5JU00 501 aa3.84□□□□□ -1.79
LRCH3-211ENST00000466054 ARHGAP17Q68EM7 881 aa3.84□□□□□ -1.79
LRCH3-211ENST00000466054 SH2D5Q6ZV89 423 aa3.84□□□□□ -1.79
LRCH3-211ENST00000466054 PIGZQ86VD9 579 aa3.84□□□□□ -1.79
LRCH3-211ENST00000466054 KLHDC8BQ8IXV7 354 aa3.84□□□□□ -1.79
LRCH3-211ENST00000466054 CDK20Q8IZL9 346 aa3.84□□□□□ -1.79
LRCH3-211ENST00000466054 FAM20AQ96MK3 541 aa3.84□□□□□ -1.79
LRCH3-211ENST00000466054 Q9H8V8 135 aa3.84□□□□□ -1.79
LRCH3-211ENST00000466054 STUB1Q9UNE7 303 aa3.84□□□□□ -1.79
LRCH3-211ENST00000466054 GAB2Q9UQC2 676 aa3.84□□□□□ -1.79
LRCH3-211ENST00000466054 RIPK3Q9Y572 518 aa3.84□□□□□ -1.79
LRCH3-211ENST00000466054 SNED1Q8TER0 1413 aa3.84□□□□□ -1.79
LRCH3-211ENST00000466054 A0A087WV48 116 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 TSPY2A6NKD2 308 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 ANXA2P2A6NMY6 339 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 AP5Z1O43299 807 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 ZG16O60844 167 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 ACSL3O95573 720 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 FAM157CP0CG43 387 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 SCG2P13521 617 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 SP100P23497 879 aaPredicted RBP3.83□□□□□ -1.8
LRCH3-211ENST00000466054 WNT5AP41221 380 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 CLDN15P56746 228 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 DLK1P80370 383 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 CDR2Q01850 454 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 VEZF1Q14119 521 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 TEAD2Q15562 447 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 GTDC1Q4AE62 458 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 SLC35D3Q5M8T2 416 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 C6orf136Q5SQH8 315 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 FAM53AQ6NSI3 398 aaPredicted RBP3.83□□□□□ -1.8
LRCH3-211ENST00000466054 IL27RAQ6UWB1 636 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 PPP1R21Q6ZMI0 780 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 C11orf57Q6ZUT1 292 aaPredicted RBP3.83□□□□□ -1.8
LRCH3-211ENST00000466054 SLC16A9Q7RTY1 509 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 RTN4RL2Q86UN3 420 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 MMD2Q8IY49 270 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 THNSL1Q8IYQ7 743 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 EID3Q8N140 333 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 WDSUB1Q8N9V3 476 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 OR4K1Q8NGD4 311 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 HPSE2Q8WWQ2 592 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 SIPA1Q96FS4 1042 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 FAM71F1Q96KD3 344 aaPredicted RBP3.83□□□□□ -1.8
LRCH3-211ENST00000466054 ZMAT2Q96NC0 199 aaKnown RBP3.83□□□□□ -1.8
LRCH3-211ENST00000466054 PRRG4Q9BZD6 226 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 FZD8Q9H461 694 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 FN3KQ9H479 309 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 SCRT2Q9NQ03 307 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 GSN-AS1Q9NRJ2 163 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 FAM207AQ9NSI2 230 aaPredicted RBP3.83□□□□□ -1.8
LRCH3-211ENST00000466054 TXNDC16Q9P2K2 825 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 SNX7Q9UNH6 387 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 WDR83OSQ9Y284 106 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 TMED3Q9Y3Q3 217 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 STK36Q9NRP7 1315 aa3.83□□□□□ -1.8
LRCH3-211ENST00000466054 TRAV24A0A0B4J272 114 aa3.82□□□□□ -1.8
LRCH3-211ENST00000466054 IGKV6D-41A0A0C4DH26 115 aa3.82□□□□□ -1.8
LRCH3-211ENST00000466054 A0A1W2PPK0 400 aa3.82□□□□□ -1.8
LRCH3-211ENST00000466054 PSMD14O00487 310 aa3.82□□□□□ -1.8
LRCH3-211ENST00000466054 EDIL3O43854 480 aa3.82□□□□□ -1.8
LRCH3-211ENST00000466054 AP2A2O94973 939 aa3.82□□□□□ -1.8
LRCH3-211ENST00000466054 NGFP01138 241 aa3.82□□□□□ -1.8
LRCH3-211ENST00000466054 PENKP01210 267 aaPredicted RBP3.82□□□□□ -1.8
LRCH3-211ENST00000466054 APOHP02749 345 aaPredicted RBP3.82□□□□□ -1.8
LRCH3-211ENST00000466054 GP1BBP13224 206 aa3.82□□□□□ -1.8
LRCH3-211ENST00000466054 KRT5P13647 590 aa3.82□□□□□ -1.8
LRCH3-211ENST00000466054 MYL6BP14649 208 aa3.82□□□□□ -1.8
LRCH3-211ENST00000466054 GNB3P16520 340 aa3.82□□□□□ -1.8
LRCH3-211ENST00000466054 ACAT1P24752 427 aaKnown RBP3.82□□□□□ -1.8
LRCH3-211ENST00000466054 HOXC13P31276 330 aa3.82□□□□□ -1.8
LRCH3-211ENST00000466054 CSTF2P33240 577 aaKnown RBP eCLIP3.82□□□□□ -1.8
LRCH3-211ENST00000466054 HSD17B3P37058 310 aa3.82□□□□□ -1.8
LRCH3-211ENST00000466054 MAGEA11P43364 429 aa3.82□□□□□ -1.8
LRCH3-211ENST00000466054 ATP12AP54707 1039 aa3.82□□□□□ -1.8
LRCH3-211ENST00000466054 GNB1P62873 340 aa3.82□□□□□ -1.8
LRCH3-211ENST00000466054 UGP2Q16851 508 aa3.82□□□□□ -1.8
LRCH3-211ENST00000466054 TMEM30BQ3MIR4 351 aa3.82□□□□□ -1.8
LRCH3-211ENST00000466054 FAM174BQ3ZCQ3 159 aa3.82□□□□□ -1.8
LRCH3-211ENST00000466054 ARHGEF16Q5VV41 709 aa3.82□□□□□ -1.8
LRCH3-211ENST00000466054 ENPP7Q6UWV6 458 aa3.82□□□□□ -1.8
LRCH3-211ENST00000466054 SH2D6Q7Z4S9 175 aa3.82□□□□□ -1.8
LRCH3-211ENST00000466054 ABI3BPQ7Z7G0 1075 aa3.82□□□□□ -1.8
LRCH3-211ENST00000466054 VSIG1Q86XK7 387 aa3.82□□□□□ -1.8
LRCH3-211ENST00000466054 LGI2Q8N0V4 545 aa3.82□□□□□ -1.8
LRCH3-211ENST00000466054 CCAR2Q8N163 923 aaKnown RBP3.82□□□□□ -1.8
LRCH3-211ENST00000466054 RASGEF1AQ8N9B8 481 aa3.82□□□□□ -1.8
LRCH3-211ENST00000466054 Q8NFD4 153 aa3.82□□□□□ -1.8
LRCH3-211ENST00000466054 VANGL1Q8TAA9 524 aaPredicted RBP3.82□□□□□ -1.8
LRCH3-211ENST00000466054 C9orf43Q8TAL5 461 aaPredicted RBP3.82□□□□□ -1.8
LRCH3-211ENST00000466054 SETD6Q8TBK2 473 aa3.82□□□□□ -1.8
LRCH3-211ENST00000466054 DYRK2Q92630 601 aa3.82□□□□□ -1.8
LRCH3-211ENST00000466054 GBP5Q96PP8 586 aa3.82□□□□□ -1.8
LRCH3-211ENST00000466054 FSD1Q9BTV5 496 aa3.82□□□□□ -1.8
LRCH3-211ENST00000466054 RBM4Q9BWF3 364 aaKnown RBP3.82□□□□□ -1.8
LRCH3-211ENST00000466054 OR2B2Q9GZK3 357 aa3.82□□□□□ -1.8
LRCH3-211ENST00000466054 ZMYND12Q9H0C1 365 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms