RNA–Protein interactions for RNA: ENST00000464646.1

RPP40-203, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5 BASIC

Gene RPP40, Length 1,042 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-203ENST00000464646 HIST2H2BCQ6DN03 193 aa13.25□□□□□ -0.29
RPP40-203ENST00000464646 PPP1R32Q7Z5V6 425 aa13.25□□□□□ -0.29
RPP40-203ENST00000464646 TMEM151BQ8IW70 566 aa13.25□□□□□ -0.29
RPP40-203ENST00000464646 MPP5Q8N3R9 675 aa13.25□□□□□ -0.29
RPP40-203ENST00000464646 C19orf60Q96EN9 201 aa13.25□□□□□ -0.29
RPP40-203ENST00000464646 VPS50Q96JG6 964 aa13.25□□□□□ -0.29
RPP40-203ENST00000464646 TREX1Q9NSU2 369 aa13.25□□□□□ -0.29
RPP40-203ENST00000464646 IL1RAPL1Q9NZN1 696 aa13.25□□□□□ -0.29
RPP40-203ENST00000464646 STOX2Q9P2F5 926 aaPredicted RBP13.25□□□□□ -0.29
RPP40-203ENST00000464646 FBXL4Q9UKA2 621 aa13.25□□□□□ -0.29
RPP40-203ENST00000464646 TCRBV7S3A2A0A539 114 aa13.24□□□□□ -0.29
RPP40-203ENST00000464646 HYKKA2RU49 373 aa13.24□□□□□ -0.29
RPP40-203ENST00000464646 TCP11X1B4DZS4 312 aa13.24□□□□□ -0.29
RPP40-203ENST00000464646 H3BMH7 237 aa13.24□□□□□ -0.29
RPP40-203ENST00000464646 GOLGA8MH3BSY2 632 aa13.24□□□□□ -0.29
RPP40-203ENST00000464646 KRT14P02533 472 aa13.24□□□□□ -0.29
RPP40-203ENST00000464646 UMODP07911 640 aa13.24□□□□□ -0.29
RPP40-203ENST00000464646 ITGAXP20702 1163 aa13.24□□□□□ -0.29
RPP40-203ENST00000464646 RPS3P23396 243 aaKnown RBP eCLIP13.24□□□□□ -0.29
RPP40-203ENST00000464646 AIMP2Q13155 320 aaKnown RBP13.24□□□□□ -0.29
RPP40-203ENST00000464646 GRB7Q14451 532 aa13.24□□□□□ -0.29
RPP40-203ENST00000464646 SIX1Q15475 284 aaPredicted RBP13.24□□□□□ -0.29
RPP40-203ENST00000464646 TUBB8Q3ZCM7 444 aa13.24□□□□□ -0.29
RPP40-203ENST00000464646 CTSL3PQ5NE16 218 aa13.24□□□□□ -0.29
RPP40-203ENST00000464646 MRPL14Q6P1L8 145 aaKnown RBP13.24□□□□□ -0.29
RPP40-203ENST00000464646 LRRC8BQ6P9F7 803 aa13.24□□□□□ -0.29
RPP40-203ENST00000464646 SUSD1Q6UWL2 747 aa13.24□□□□□ -0.29
RPP40-203ENST00000464646 OVCH1Q7RTY7 1134 aa13.24□□□□□ -0.29
RPP40-203ENST00000464646 ADCK2Q7Z695 626 aa13.24□□□□□ -0.29
RPP40-203ENST00000464646 Q8NA96 180 aa13.24□□□□□ -0.29
RPP40-203ENST00000464646 TRIM58Q8NG06 486 aa13.24□□□□□ -0.29
RPP40-203ENST00000464646 SSC4DQ8WTU2 575 aa13.24□□□□□ -0.29
RPP40-203ENST00000464646 ZUFSPQ96AP4 578 aa13.24□□□□□ -0.29
RPP40-203ENST00000464646 ZNF669Q96BR6 464 aaPredicted RBP13.24□□□□□ -0.29
RPP40-203ENST00000464646 CABS1Q96KC9 395 aa13.24□□□□□ -0.29
RPP40-203ENST00000464646 P2RY12Q9H244 342 aa13.24□□□□□ -0.29
RPP40-203ENST00000464646 ZNF552Q9H707 407 aaPredicted RBP13.24□□□□□ -0.29
RPP40-203ENST00000464646 ZNF304Q9HCX3 659 aa13.24□□□□□ -0.29
RPP40-203ENST00000464646 SLC6A20Q9NP91 592 aa13.24□□□□□ -0.29
RPP40-203ENST00000464646 MRPS30Q9NP92 439 aaKnown RBP13.24□□□□□ -0.29
RPP40-203ENST00000464646 HOMER3Q9NSC5 361 aa13.24□□□□□ -0.29
RPP40-203ENST00000464646 ASF1BQ9NVP2 202 aa13.24□□□□□ -0.29
RPP40-203ENST00000464646 CTSFQ9UBX1 484 aa13.24□□□□□ -0.29
RPP40-203ENST00000464646 SOX13Q9UN79 622 aa13.24□□□□□ -0.29
RPP40-203ENST00000464646 B3GNT3Q9Y2A9 372 aa13.24□□□□□ -0.29
RPP40-203ENST00000464646 ZKSCAN5Q9Y2L8 839 aa13.24□□□□□ -0.29
RPP40-203ENST00000464646 SHANK1Q9Y566 2161 aa13.24□□□□□ -0.29
RPP40-203ENST00000464646 PCSK5Q92824 1860 aa13.23□□□□□ -0.29
RPP40-203ENST00000464646 HECTD1Q9ULT8 2610 aa13.23□□□□□ -0.29
RPP40-203ENST00000464646 H3BMM5 538 aa13.23□□□□□ -0.29
RPP40-203ENST00000464646 SEMA7AO75326 666 aa13.23□□□□□ -0.29
RPP40-203ENST00000464646 AVILO75366 819 aa13.23□□□□□ -0.29
RPP40-203ENST00000464646 FKBP9O95302 570 aa13.23□□□□□ -0.29
RPP40-203ENST00000464646 F7P08709 466 aaPredicted RBP13.23□□□□□ -0.29
RPP40-203ENST00000464646 TPSB2P20231 275 aa13.23□□□□□ -0.29
RPP40-203ENST00000464646 MMP11P24347 488 aa13.23□□□□□ -0.29
RPP40-203ENST00000464646 DHX34Q14147 1143 aaKnown RBP13.23□□□□□ -0.29
RPP40-203ENST00000464646 FASTKQ14296 549 aaKnown RBP13.23□□□□□ -0.29
RPP40-203ENST00000464646 TPSAB1Q15661 275 aa13.23□□□□□ -0.29
RPP40-203ENST00000464646 NKG7Q16617 165 aa13.23□□□□□ -0.29
RPP40-203ENST00000464646 HIF1AQ16665 826 aa13.23□□□□□ -0.29
RPP40-203ENST00000464646 KLHL38Q2WGJ6 581 aa13.23□□□□□ -0.29
RPP40-203ENST00000464646 ANKRD20A4Q4UJ75 823 aa13.23□□□□□ -0.29
RPP40-203ENST00000464646 THEMIS2Q5TEJ8 643 aa13.23□□□□□ -0.29
RPP40-203ENST00000464646 YOD1Q5VVQ6 348 aaPredicted RBP13.23□□□□□ -0.29
RPP40-203ENST00000464646 FRMPD2BQ6IN97 320 aa13.23□□□□□ -0.29
RPP40-203ENST00000464646 DRICH1Q6PGQ1 229 aaPredicted RBP13.23□□□□□ -0.29
RPP40-203ENST00000464646 DTWD1Q8N5C7 304 aa13.23□□□□□ -0.29
RPP40-203ENST00000464646 OR2L3Q8NG85 312 aa13.23□□□□□ -0.29
RPP40-203ENST00000464646 OR9A1PQ8NGU1 263 aa13.23□□□□□ -0.29
RPP40-203ENST00000464646 MAGOHBQ96A72 148 aaKnown RBP13.23□□□□□ -0.29
RPP40-203ENST00000464646 FKBP10Q96AY3 582 aa13.23□□□□□ -0.29
RPP40-203ENST00000464646 MIEF2Q96C03 454 aa13.23□□□□□ -0.29
RPP40-203ENST00000464646 SNRNP40Q96DI7 357 aaKnown RBP13.23□□□□□ -0.29
RPP40-203ENST00000464646 THOC3Q96J01 351 aaKnown RBP13.23□□□□□ -0.29
RPP40-203ENST00000464646 DPH7Q9BTV6 452 aa13.23□□□□□ -0.29
RPP40-203ENST00000464646 CRB3Q9BUF7 120 aa13.23□□□□□ -0.29
RPP40-203ENST00000464646 MENTQ9BUN1 341 aa13.23□□□□□ -0.29
RPP40-203ENST00000464646 KIFC1Q9BW19 673 aa13.23□□□□□ -0.29
RPP40-203ENST00000464646 MRM3Q9HC36 420 aaKnown RBP13.23□□□□□ -0.29
RPP40-203ENST00000464646 SLC22A11Q9NSA0 550 aa13.23□□□□□ -0.29
RPP40-203ENST00000464646 SPATA7Q9P0W8 599 aa13.23□□□□□ -0.29
RPP40-203ENST00000464646 COPG1Q9Y678 874 aaKnown RBP13.23□□□□□ -0.29
RPP40-203ENST00000464646 MAD1L1Q9Y6D9 718 aa13.23□□□□□ -0.29
RPP40-203ENST00000464646 LOC105369274A0A096LPK9 316 aa13.22□□□□□ -0.29
RPP40-203ENST00000464646 LOC102723532A0A0G2JNH3 316 aa13.22□□□□□ -0.29
RPP40-203ENST00000464646 TARM1B6A8C7 271 aa13.22□□□□□ -0.29
RPP40-203ENST00000464646 SRPX2O60687 465 aaPredicted RBP13.22□□□□□ -0.29
RPP40-203ENST00000464646 CTSVO60911 334 aa13.22□□□□□ -0.29
RPP40-203ENST00000464646 VPS26AO75436 327 aa13.22□□□□□ -0.29
RPP40-203ENST00000464646 USP1O94782 785 aa13.22□□□□□ -0.29
RPP40-203ENST00000464646 ALBP02768 609 aa13.22□□□□□ -0.29
RPP40-203ENST00000464646 CATP04040 527 aaKnown RBP13.22□□□□□ -0.29
RPP40-203ENST00000464646 PKMP14618 531 aaKnown RBP13.22□□□□□ -0.29
RPP40-203ENST00000464646 FBLP22087 321 aaKnown RBP13.22□□□□□ -0.29
RPP40-203ENST00000464646 CDK16Q00536 496 aa13.22□□□□□ -0.29
RPP40-203ENST00000464646 MUM1Q2TAK8 710 aa13.22□□□□□ -0.29
RPP40-203ENST00000464646 TTLL9Q3SXZ7 439 aa13.22□□□□□ -0.29
RPP40-203ENST00000464646 AGAP7PQ5VUJ5 663 aa13.22□□□□□ -0.29
RPP40-203ENST00000464646 PRAMEF13Q5VWM6 474 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms