RNA–Protein interactions for RNA: ENST00000464451.5

SEC61A1-203, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-203ENST00000464451 KRT6AP02538 564 aa11.78□□□□□ -0.52
SEC61A1-203ENST00000464451 KRT6BP04259 564 aa11.78□□□□□ -0.52
SEC61A1-203ENST00000464451 UGT2B4P06133 528 aa11.78□□□□□ -0.52
SEC61A1-203ENST00000464451 C8GP07360 202 aa11.78□□□□□ -0.52
SEC61A1-203ENST00000464451 SP9P0CG40 484 aa11.78□□□□□ -0.52
SEC61A1-203ENST00000464451 NCK1P16333 377 aa11.78□□□□□ -0.52
SEC61A1-203ENST00000464451 CCR7P32248 378 aa11.78□□□□□ -0.52
SEC61A1-203ENST00000464451 KRT6CP48668 564 aa11.78□□□□□ -0.52
SEC61A1-203ENST00000464451 SPINT3P49223 89 aa11.78□□□□□ -0.52
SEC61A1-203ENST00000464451 FNTBP49356 437 aa11.78□□□□□ -0.52
SEC61A1-203ENST00000464451 APOFQ13790 326 aa11.78□□□□□ -0.52
SEC61A1-203ENST00000464451 IMPG1Q17R60 797 aa11.78□□□□□ -0.52
SEC61A1-203ENST00000464451 TMTC4Q5T4D3 741 aa11.78□□□□□ -0.52
SEC61A1-203ENST00000464451 KRT80Q6KB66 452 aa11.78□□□□□ -0.52
SEC61A1-203ENST00000464451 TRMT11Q7Z4G4 463 aaKnown RBP11.78□□□□□ -0.52
SEC61A1-203ENST00000464451 PLPP6Q8IY26 295 aa11.78□□□□□ -0.52
SEC61A1-203ENST00000464451 PGBD3Q8N328 593 aa11.78□□□□□ -0.52
SEC61A1-203ENST00000464451 AADATQ8N5Z0 425 aa11.78□□□□□ -0.52
SEC61A1-203ENST00000464451 TSTD1Q8NFU3 115 aa11.78□□□□□ -0.52
SEC61A1-203ENST00000464451 OR8J3Q8NGG0 315 aa11.78□□□□□ -0.52
SEC61A1-203ENST00000464451 HMGB4Q8WW32 186 aa11.78□□□□□ -0.52
SEC61A1-203ENST00000464451 TFAP2CQ92754 450 aa11.78□□□□□ -0.52
SEC61A1-203ENST00000464451 USP7Q93009 1102 aa11.78□□□□□ -0.52
SEC61A1-203ENST00000464451 DGCR14Q96DF8 476 aaKnown RBP11.78□□□□□ -0.52
SEC61A1-203ENST00000464451 SLC12A9Q9BXP2 914 aa11.78□□□□□ -0.52
SEC61A1-203ENST00000464451 TPSD1Q9BZJ3 242 aa11.78□□□□□ -0.52
SEC61A1-203ENST00000464451 SLC32A1Q9H598 525 aa11.78□□□□□ -0.52
SEC61A1-203ENST00000464451 LRTM1Q9HBL6 345 aa11.78□□□□□ -0.52
SEC61A1-203ENST00000464451 PRMT8Q9NR22 394 aaPredicted RBP11.78□□□□□ -0.52
SEC61A1-203ENST00000464451 PNPLA3Q9NST1 481 aa11.78□□□□□ -0.52
SEC61A1-203ENST00000464451 INVSQ9Y283 1065 aa11.78□□□□□ -0.52
SEC61A1-203ENST00000464451 HCN4Q9Y3Q4 1203 aa11.78□□□□□ -0.52
SEC61A1-203ENST00000464451 COMMD3-BMI1R4GMX3 469 aa11.78□□□□□ -0.52
SEC61A1-203ENST00000464451 FAM149AA5PLN7 773 aa11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 NUAK1O60285 661 aa11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 TPST1O60507 370 aa11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 RSL1D1O76021 490 aaKnown RBP11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 H6PDO95479 791 aa11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 IL6P05231 212 aa11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 C1SP09871 688 aa11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 HRH2P25021 359 aa11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 AOAHP28039 575 aa11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 AKT1P31749 480 aa11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 HNMTP50135 292 aa11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 DGKQP52824 942 aa11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 SH3BGRP55822 239 aaPredicted RBP11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 ST8SIA6P61647 398 aa11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 ROR2Q01974 943 aaKnown RBP11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 SRSF5Q13243 272 aaKnown RBP11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 GBX1Q14549 363 aa11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 KIAA0040Q15053 153 aa11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 ATP6AP1Q15904 470 aa11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 BRAT1Q6PJG6 821 aa11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 GDPD4Q6W3E5 623 aa11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 LRRC70Q7Z2Q7 622 aa11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 SPDYE1Q8NFV5 336 aaPredicted RBP11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 SLC13A3Q8WWT9 602 aa11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 BIRC7Q96CA5 298 aa11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 NSMCE2Q96MF7 247 aa11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 PPM1MQ96MI6 270 aa11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 GABRG3Q99928 467 aa11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 HAUS8Q9BT25 410 aa11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 IER2Q9BTL4 223 aa11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 TRIM4Q9C037 500 aa11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 TMEM245Q9H330 911 aa11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 RPF2Q9H7B2 306 aaKnown RBP11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 ACTR8Q9H981 624 aa11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 PARVBQ9HBI1 364 aa11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 PKD2L2Q9NZM6 624 aa11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 B4GALT6Q9UBX8 382 aa11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 PDE10AQ9Y233 779 aa11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 R4GN57 208 aa11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 USP34Q70CQ2 3546 aa11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 ZNF318Q5VUA4 2279 aa11.77□□□□□ -0.53
SEC61A1-203ENST00000464451 RNF103-CHMP3A0A140T963 221 aa11.76□□□□□ -0.53
SEC61A1-203ENST00000464451 ARHGAP10A1A4S6 786 aa11.76□□□□□ -0.53
SEC61A1-203ENST00000464451 PABPN1LA6NDY0 278 aaKnown RBP11.76□□□□□ -0.53
SEC61A1-203ENST00000464451 KPNA5O15131 536 aa11.76□□□□□ -0.53
SEC61A1-203ENST00000464451 SEC22BO75396 215 aa11.76□□□□□ -0.53
SEC61A1-203ENST00000464451 RASAL1O95294 804 aa11.76□□□□□ -0.53
SEC61A1-203ENST00000464451 HIST1H2AGP0C0S8 130 aaPredicted RBP11.76□□□□□ -0.53
SEC61A1-203ENST00000464451 ATP1B2P14415 290 aaPredicted RBP11.76□□□□□ -0.53
SEC61A1-203ENST00000464451 ATP6V1B1P15313 513 aa11.76□□□□□ -0.53
SEC61A1-203ENST00000464451 ZNF30P17039 623 aa11.76□□□□□ -0.53
SEC61A1-203ENST00000464451 HIST1H2ADP20671 130 aa11.76□□□□□ -0.53
SEC61A1-203ENST00000464451 RECQLP46063 649 aaPredicted RBP11.76□□□□□ -0.53
SEC61A1-203ENST00000464451 DGKEP52429 567 aa11.76□□□□□ -0.53
SEC61A1-203ENST00000464451 NR1H2P55055 460 aa11.76□□□□□ -0.53
SEC61A1-203ENST00000464451 OR4D2P58180 307 aa11.76□□□□□ -0.53
SEC61A1-203ENST00000464451 HMGCS1Q01581 520 aa11.76□□□□□ -0.53
SEC61A1-203ENST00000464451 PLOD1Q02809 727 aaPredicted RBP11.76□□□□□ -0.53
SEC61A1-203ENST00000464451 PTGR1Q14914 329 aa11.76□□□□□ -0.53
SEC61A1-203ENST00000464451 SGO1Q5FBB7 561 aa11.76□□□□□ -0.53
SEC61A1-203ENST00000464451 THEMIS2Q5TEJ8 643 aa11.76□□□□□ -0.53
SEC61A1-203ENST00000464451 GLYATQ6IB77 296 aa11.76□□□□□ -0.53
SEC61A1-203ENST00000464451 ISLR2Q6UXK2 745 aa11.76□□□□□ -0.53
SEC61A1-203ENST00000464451 MAMSTRQ6ZN01 415 aa11.76□□□□□ -0.53
SEC61A1-203ENST00000464451 MBOAT1Q6ZNC8 495 aa11.76□□□□□ -0.53
SEC61A1-203ENST00000464451 RFLNAQ6ZTI6 216 aa11.76□□□□□ -0.53
SEC61A1-203ENST00000464451 Q6ZVU0 165 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms