RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 CHRNGP07510 517 aa13.86□□□□□ -0.19
COL6A1-202ENST00000463060 CHRM5P08912 532 aaPredicted RBP13.86□□□□□ -0.19
COL6A1-202ENST00000463060 MYF5P13349 255 aa13.86□□□□□ -0.19
COL6A1-202ENST00000463060 EPB42P16452 691 aa13.86□□□□□ -0.19
COL6A1-202ENST00000463060 CASP2P42575 452 aa13.86□□□□□ -0.19
COL6A1-202ENST00000463060 GPR3P46089 330 aa13.86□□□□□ -0.19
COL6A1-202ENST00000463060 ATXN3P54252 364 aaPredicted RBP13.86□□□□□ -0.19
COL6A1-202ENST00000463060 EPHA4P54764 986 aa13.86□□□□□ -0.19
COL6A1-202ENST00000463060 SH3BP2P78314 561 aa13.86□□□□□ -0.19
COL6A1-202ENST00000463060 CDC16Q13042 620 aa13.86□□□□□ -0.19
COL6A1-202ENST00000463060 SUZ12Q15022 739 aaKnown RBP13.86□□□□□ -0.19
COL6A1-202ENST00000463060 CFAP157Q5JU67 520 aa13.86□□□□□ -0.19
COL6A1-202ENST00000463060 CAPN13Q6MZZ7 669 aaPredicted RBP13.86□□□□□ -0.19
COL6A1-202ENST00000463060 ZNF761Q86XN6 746 aaPredicted RBP13.86□□□□□ -0.19
COL6A1-202ENST00000463060 RAB42Q8N4Z0 105 aa13.86□□□□□ -0.19
COL6A1-202ENST00000463060 LRRC8CQ8TDW0 803 aa13.86□□□□□ -0.19
COL6A1-202ENST00000463060 TRPC4APQ8TEL6 797 aa13.86□□□□□ -0.19
COL6A1-202ENST00000463060 MIPEPQ99797 713 aa13.86□□□□□ -0.19
COL6A1-202ENST00000463060 NTMT1Q9BV86 223 aa13.86□□□□□ -0.19
COL6A1-202ENST00000463060 CAPS2Q9BXY5 557 aa13.86□□□□□ -0.19
COL6A1-202ENST00000463060 SRMSQ9H3Y6 488 aa13.86□□□□□ -0.19
COL6A1-202ENST00000463060 STN1Q9H668 368 aaKnown RBP13.86□□□□□ -0.19
COL6A1-202ENST00000463060 IPPKQ9H8X2 491 aa13.86□□□□□ -0.19
COL6A1-202ENST00000463060 TNFRSF12AQ9NP84 129 aa13.86□□□□□ -0.19
COL6A1-202ENST00000463060 SLCO1B3Q9NPD5 702 aa13.86□□□□□ -0.19
COL6A1-202ENST00000463060 CCDC177Q9NQR7 707 aaPredicted RBP13.86□□□□□ -0.19
COL6A1-202ENST00000463060 NCDNQ9UBB6 729 aa13.86□□□□□ -0.19
COL6A1-202ENST00000463060 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.86□□□□□ -0.19
COL6A1-202ENST00000463060 PIEZO1Q92508 2521 aa13.86□□□□□ -0.19
COL6A1-202ENST00000463060 OR6C74A6NCV1 312 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 TCP11X1B4DZS4 312 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 B4GAT1O43505 415 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 LYPLA1O75608 230 aaPredicted RBP13.85□□□□□ -0.19
COL6A1-202ENST00000463060 WFS1O76024 890 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 SNUPNO95149 360 aaKnown RBP13.85□□□□□ -0.19
COL6A1-202ENST00000463060 FGF4P08620 206 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 NEFHP12036 1026 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 CKMT1AP12532 417 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 TSPAN8P19075 237 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 PRDX3P30048 256 aaKnown RBP13.85□□□□□ -0.19
COL6A1-202ENST00000463060 LSP1P33241 339 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 GRK6P43250 576 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 PIK3CGP48736 1102 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 ERVPABLB-1P60509 514 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 YBX1P67809 324 aaKnown RBP13.85□□□□□ -0.19
COL6A1-202ENST00000463060 LCP2Q13094 533 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 TRAF3Q13114 568 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 SQSTM1Q13501 440 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 KIR2DS3Q14952 304 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 NR0B2Q15466 257 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 TUBB8Q3ZCM7 444 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 SLCO4C1Q6ZQN7 724 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 PRR23CQ6ZRP0 262 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 SYVN1Q86TM6 617 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 OR6C4Q8NGE1 309 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 OR52B6Q8NGF0 335 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 PPP1R14CQ8TAE6 165 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 AGAP11Q8TF27 550 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 WDR34Q96EX3 536 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 MED8Q96G25 268 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 C7orf26Q96N11 449 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 OR2A14Q96R47 310 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 ZNF382Q96SR6 550 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 HAUS8Q9BT25 410 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 EDEM2Q9BV94 578 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 PCBD2Q9H0N5 130 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 NOL11Q9H8H0 719 aaKnown RBP13.85□□□□□ -0.19
COL6A1-202ENST00000463060 SEMA4BQ9NPR2 832 aaPredicted RBP13.85□□□□□ -0.19
COL6A1-202ENST00000463060 GPRC5BQ9NZH0 403 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 SH2B3Q9UQQ2 575 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 ENTPD2Q9Y5L3 495 aa13.85□□□□□ -0.19
COL6A1-202ENST00000463060 ASXL3Q9C0F0 2248 aa13.84□□□□□ -0.19
COL6A1-202ENST00000463060 IGHV1OR21-1A0A087WYE8 117 aa13.84□□□□□ -0.19
COL6A1-202ENST00000463060 IGKV1-8A0A0C4DH67 115 aa13.84□□□□□ -0.19
COL6A1-202ENST00000463060 PIPSLA2A3N6 862 aa13.84□□□□□ -0.19
COL6A1-202ENST00000463060 OR5K3A6NET4 321 aa13.84□□□□□ -0.19
COL6A1-202ENST00000463060 RHPN2P1A8MT19 583 aa13.84□□□□□ -0.19
COL6A1-202ENST00000463060 FLRT2O43155 660 aa13.84□□□□□ -0.19
COL6A1-202ENST00000463060 FOXD2O60548 495 aaPredicted RBP13.84□□□□□ -0.19
COL6A1-202ENST00000463060 EDF1O60869 148 aaKnown RBP13.84□□□□□ -0.19
COL6A1-202ENST00000463060 MLYCDO95822 493 aa13.84□□□□□ -0.19
COL6A1-202ENST00000463060 PSMB5P28074 263 aa13.84□□□□□ -0.19
COL6A1-202ENST00000463060 PKNOX1P55347 436 aa13.84□□□□□ -0.19
COL6A1-202ENST00000463060 NHLH1Q02575 133 aa13.84□□□□□ -0.19
COL6A1-202ENST00000463060 CFHR1Q03591 330 aa13.84□□□□□ -0.19
COL6A1-202ENST00000463060 PRDX1Q06830 199 aaKnown RBP13.84□□□□□ -0.19
COL6A1-202ENST00000463060 PLCL1Q15111 1095 aa13.84□□□□□ -0.19
COL6A1-202ENST00000463060 TBCCQ15814 346 aa13.84□□□□□ -0.19
COL6A1-202ENST00000463060 PRAMEF13Q5VWM6 474 aa13.84□□□□□ -0.19
COL6A1-202ENST00000463060 ICE2Q659A1 982 aa13.84□□□□□ -0.19
COL6A1-202ENST00000463060 GUSBP11Q6P575 273 aa13.84□□□□□ -0.19
COL6A1-202ENST00000463060 L3MBTL4Q8NA19 623 aa13.84□□□□□ -0.19
COL6A1-202ENST00000463060 ABHD11Q8NFV4 315 aa13.84□□□□□ -0.19
COL6A1-202ENST00000463060 OR4K1Q8NGD4 311 aa13.84□□□□□ -0.19
COL6A1-202ENST00000463060 PPP4R1Q8TF05 950 aa13.84□□□□□ -0.19
COL6A1-202ENST00000463060 RSC1A1Q92681 617 aa13.84□□□□□ -0.19
COL6A1-202ENST00000463060 NEIL2Q969S2 332 aa13.84□□□□□ -0.19
COL6A1-202ENST00000463060 SLC22A18Q96BI1 424 aa13.84□□□□□ -0.19
COL6A1-202ENST00000463060 PHOX2BQ99453 314 aa13.84□□□□□ -0.19
COL6A1-202ENST00000463060 SLC38A3Q99624 504 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms