RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 TTC4O95801 387 aa9.76□□□□□ -0.85
SF3A3-204ENST00000462258 MCM3P25205 808 aa9.76□□□□□ -0.85
SF3A3-204ENST00000462258 FOLR3P41439 243 aa9.76□□□□□ -0.85
SF3A3-204ENST00000462258 GRIA3P42263 894 aa9.76□□□□□ -0.85
SF3A3-204ENST00000462258 GCGRP47871 477 aa9.76□□□□□ -0.85
SF3A3-204ENST00000462258 DCDP81605 110 aaKnown RBP9.76□□□□□ -0.85
SF3A3-204ENST00000462258 FASTKQ14296 549 aaKnown RBP9.76□□□□□ -0.85
SF3A3-204ENST00000462258 NAA25Q14CX7 972 aa9.76□□□□□ -0.85
SF3A3-204ENST00000462258 MORF4L2Q15014 288 aa9.76□□□□□ -0.85
SF3A3-204ENST00000462258 CYP2A13Q16696 494 aa9.76□□□□□ -0.85
SF3A3-204ENST00000462258 BBS9Q3SYG4 887 aa9.76□□□□□ -0.85
SF3A3-204ENST00000462258 NKAIN1Q4KMZ8 207 aa9.76□□□□□ -0.85
SF3A3-204ENST00000462258 MSS51Q4VC12 460 aa9.76□□□□□ -0.85
SF3A3-204ENST00000462258 ZC3H12BQ5HYM0 836 aaKnown RBP9.76□□□□□ -0.85
SF3A3-204ENST00000462258 TCTE1Q5JU00 501 aa9.76□□□□□ -0.85
SF3A3-204ENST00000462258 SPANXN3Q5MJ09 141 aa9.76□□□□□ -0.85
SF3A3-204ENST00000462258 MLIPQ5VWP3 458 aa9.76□□□□□ -0.85
SF3A3-204ENST00000462258 TCTN3Q6NUS6 607 aa9.76□□□□□ -0.85
SF3A3-204ENST00000462258 FIGLAQ6QHK4 219 aa9.76□□□□□ -0.85
SF3A3-204ENST00000462258 SYDE1Q6ZW31 735 aaPredicted RBP9.76□□□□□ -0.85
SF3A3-204ENST00000462258 RNF44Q7L0R7 432 aa9.76□□□□□ -0.85
SF3A3-204ENST00000462258 CREG2Q8IUH2 290 aa9.76□□□□□ -0.85
SF3A3-204ENST00000462258 MCATQ8IVS2 390 aaKnown RBP9.76□□□□□ -0.85
SF3A3-204ENST00000462258 CPNE9Q8IYJ1 553 aa9.76□□□□□ -0.85
SF3A3-204ENST00000462258 TTC29Q8NA56 475 aaPredicted RBP9.76□□□□□ -0.85
SF3A3-204ENST00000462258 OR9A1PQ8NGU1 263 aa9.76□□□□□ -0.85
SF3A3-204ENST00000462258 GABPB2Q8TAK5 448 aaPredicted RBP9.76□□□□□ -0.85
SF3A3-204ENST00000462258 CERS2Q96G23 380 aa9.76□□□□□ -0.85
SF3A3-204ENST00000462258 NDNQ99608 321 aa9.76□□□□□ -0.85
SF3A3-204ENST00000462258 GPR21Q99679 349 aa9.76□□□□□ -0.85
SF3A3-204ENST00000462258 EBNA1BP2Q99848 306 aaKnown RBP9.76□□□□□ -0.85
SF3A3-204ENST00000462258 TRIM51Q9BSJ1 452 aa9.76□□□□□ -0.85
SF3A3-204ENST00000462258 NAT9Q9BTE0 207 aa9.76□□□□□ -0.85
SF3A3-204ENST00000462258 AARSD1Q9BTE6 412 aaKnown RBP9.76□□□□□ -0.85
SF3A3-204ENST00000462258 ACAT2Q9BWD1 397 aa9.76□□□□□ -0.85
SF3A3-204ENST00000462258 EPN3Q9H201 632 aa9.76□□□□□ -0.85
SF3A3-204ENST00000462258 IFT80Q9P2H3 777 aaPredicted RBP9.76□□□□□ -0.85
SF3A3-204ENST00000462258 KLHL42Q9P2K6 505 aa9.76□□□□□ -0.85
SF3A3-204ENST00000462258 ANAPC2Q9UJX6 822 aa9.76□□□□□ -0.85
SF3A3-204ENST00000462258 TLK1Q9UKI8 766 aa9.76□□□□□ -0.85
SF3A3-204ENST00000462258 MDC1Q14676 2089 aaKnown RBP9.75□□□□□ -0.85
SF3A3-204ENST00000462258 ZNF839A8K0R7 811 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 TARM1B6A8C7 271 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 CCDC188H7C350 402 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 K7EM74 188 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 EIF3FO00303 357 aaPredicted RBP9.75□□□□□ -0.85
SF3A3-204ENST00000462258 FANCGO15287 622 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 CTSVO60911 334 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 KLF7O75840 302 aaPredicted RBP9.75□□□□□ -0.85
SF3A3-204ENST00000462258 HAUS5O94927 633 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 ZIC2O95409 532 aaPredicted RBP9.75□□□□□ -0.85
SF3A3-204ENST00000462258 SLC16A8O95907 504 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 SYF2O95926 243 aaKnown RBP9.75□□□□□ -0.85
SF3A3-204ENST00000462258 MPC1LP0DKB6 136 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 ERVK-10P10266 1014 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 IVDP26440 423 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 CMPK1P30085 196 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 OTX2P32243 289 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 RPA3P35244 121 aaPredicted RBP9.75□□□□□ -0.85
SF3A3-204ENST00000462258 CASRP41180 1078 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 PNLIPRP1P54315 467 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 ARSFP54793 590 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 TLE1Q04724 770 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 KLRB1Q12918 225 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 TSTA3Q13630 321 aaPredicted RBP9.75□□□□□ -0.85
SF3A3-204ENST00000462258 ATP1A4Q13733 1029 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 GRM7Q14831 915 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 ARHGAP19Q14CB8 494 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 YOD1Q5VVQ6 348 aaPredicted RBP9.75□□□□□ -0.85
SF3A3-204ENST00000462258 LRRC8EQ6NSJ5 796 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 SUSD1Q6UWL2 747 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 TTLL10Q6ZVT0 673 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 ASB18Q6ZVZ8 466 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 PIWIL4Q7Z3Z4 852 aaKnown RBP9.75□□□□□ -0.85
SF3A3-204ENST00000462258 MRGPREQ86SM8 312 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 SPNS2Q8IVW8 549 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 CNTN4Q8IWV2 1026 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 PDIK1LQ8N165 341 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 FBXO15Q8NCQ5 510 aaPredicted RBP9.75□□□□□ -0.85
SF3A3-204ENST00000462258 C2CD4AQ8NCU7 369 aaPredicted RBP9.75□□□□□ -0.85
SF3A3-204ENST00000462258 OR2A1Q8NGT9 310 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 SMPDL3AQ92484 453 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 INPP5DQ92835 1189 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 ZUFSPQ96AP4 578 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 ZNF285Q96NJ3 590 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 PKP4Q99569 1192 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 ING2Q9H160 280 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 SLC6A20Q9NP91 592 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 CUTCQ9NTM9 273 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 SLC17A6Q9P2U8 582 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 TAC3Q9UHF0 121 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 TRMT6Q9UJA5 497 aaKnown RBP9.75□□□□□ -0.85
SF3A3-204ENST00000462258 CHMP2BQ9UQN3 213 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 DHRS7Q9Y394 339 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 PTRH2Q9Y3E5 179 aaKnown RBP9.75□□□□□ -0.85
SF3A3-204ENST00000462258 KLK4Q9Y5K2 254 aa9.75□□□□□ -0.85
SF3A3-204ENST00000462258 A0A0J9YVX5 310 aa9.74□□□□□ -0.85
SF3A3-204ENST00000462258 OR2A25A4D2G3 310 aa9.74□□□□□ -0.85
SF3A3-204ENST00000462258 SMAPO00193 183 aa9.74□□□□□ -0.85
SF3A3-204ENST00000462258 DSCR3O14972 297 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms