RNA–Protein interactions for RNA: ENST00000462236.1

COPS3-204, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-204ENST00000462236 MDM4O15151 490 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 KIF1CO43896 1103 aaKnown RBP4.83□□□□□ -1.64
COPS3-204ENST00000462236 GP1BAP07359 652 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 KRT19P08727 400 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 TMEM191BP0C7N4 346 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 HOXD9P28356 352 aaPredicted RBP4.83□□□□□ -1.64
COPS3-204ENST00000462236 HLA-FP30511 346 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 ATP5C1P36542 298 aaKnown RBP4.83□□□□□ -1.64
COPS3-204ENST00000462236 ARRB1P49407 418 aaPredicted RBP4.83□□□□□ -1.64
COPS3-204ENST00000462236 C21orf59P57076 290 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 ID2Q02363 134 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 PAPD7Q5XG87 772 aaKnown RBP4.83□□□□□ -1.64
COPS3-204ENST00000462236 SLC18B1Q6NT16 456 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 GJB7Q6PEY0 223 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 NCEH1Q6PIU2 408 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 SCD5Q86SK9 330 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 ADIPOR2Q86V24 386 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 IGFN1Q86VF2 1251 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 IQCHQ86VS3 1027 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 SFR1Q86XK3 245 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 CACUL1Q86Y37 369 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 SLC25A45Q8N413 288 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 TEX19Q8NA77 164 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 OR4C6Q8NH72 309 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 ZCCHC10Q8TBK6 192 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 RAD54LQ92698 747 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 HTRA1Q92743 480 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 DNAJC19Q96DA6 116 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 SMARCD1Q96GM5 515 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 ANKRD36BP1Q96IX9 119 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 C8orf76Q96K31 380 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 CBWD1Q9BRT8 395 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 PIMREGQ9BSJ6 248 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 RSPH9Q9H1X1 276 aaPredicted RBP4.83□□□□□ -1.64
COPS3-204ENST00000462236 FBXO44Q9H4M3 255 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 NMUR1Q9HB89 426 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 DMAP1Q9NPF5 467 aaPredicted RBP4.83□□□□□ -1.64
COPS3-204ENST00000462236 NRIP3Q9NQ35 241 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 TLR8Q9NR97 1041 aaKnown RBP4.83□□□□□ -1.64
COPS3-204ENST00000462236 THSD1Q9NS62 852 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 PPP1R14DQ9NXH3 145 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 ARL15Q9NXU5 204 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 RBAKQ9NYW8 714 aaPredicted RBP4.83□□□□□ -1.64
COPS3-204ENST00000462236 SEL1LQ9UBV2 794 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 STOML2Q9UJZ1 356 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 LSM7Q9UK45 103 aaKnown RBP4.83□□□□□ -1.64
COPS3-204ENST00000462236 SCML1Q9UN30 329 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 CCDC88CQ9P219 2028 aa4.83□□□□□ -1.64
COPS3-204ENST00000462236 ANKHD1Q8IWZ3 2542 aaKnown RBP4.83□□□□□ -1.64
COPS3-204ENST00000462236 CSMD2Q7Z408 3487 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 ZNF469Q96JG9 3925 aaPredicted RBP4.82□□□□□ -1.64
COPS3-204ENST00000462236 ITIH6Q6UXX5 1313 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 KIR2DS5A0A0G2JLQ3 304 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 A0A1B0GVM2 712 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 GOLGA8IPA6NC78 632 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 FAM90A7PA6NKC0 464 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 GOLGA8JA6NMD2 632 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 FAM90A22PA8MWA6 464 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 FAM90A12PA8MX19 464 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 FAM90A23PA8MXZ1 464 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 E5RJQ4 531 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 KIR2DS3K7RE56 304 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 PEX12O00623 359 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 MSI1O43347 362 aaKnown RBP4.82□□□□□ -1.64
COPS3-204ENST00000462236 CSO75390 466 aaKnown RBP4.82□□□□□ -1.64
COPS3-204ENST00000462236 AGR2O95994 175 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 PGM1P36871 562 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 ARL1P40616 181 aaPredicted RBP4.82□□□□□ -1.64
COPS3-204ENST00000462236 CPA2P48052 419 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 HARS2P49590 506 aaKnown RBP4.82□□□□□ -1.64
COPS3-204ENST00000462236 DUSP3P51452 185 aaPredicted RBP4.82□□□□□ -1.64
COPS3-204ENST00000462236 PDX1P52945 283 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 OVGP1Q12889 678 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 GALNT3Q14435 633 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 ISXQ2M1V0 245 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 TTC31Q49AM3 519 aaPredicted RBP4.82□□□□□ -1.64
COPS3-204ENST00000462236 C5orf22Q49AR2 442 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 ZNF776Q68DI1 518 aaPredicted RBP4.82□□□□□ -1.64
COPS3-204ENST00000462236 CENPQQ7L2Z9 268 aaPredicted RBP4.82□□□□□ -1.64
COPS3-204ENST00000462236 TRAPPC11Q7Z392 1133 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 WDR49Q8IV35 697 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 SRRM1Q8IYB3 904 aaKnown RBP4.82□□□□□ -1.64
COPS3-204ENST00000462236 CRYBG2Q8N1P7 616 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 GPD1LQ8N335 351 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 ZNF366Q8N895 744 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 OR2T34Q8NGX1 318 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 WFDC5Q8TCV5 224 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 WFIKKN2Q8TEU8 576 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 C2CD4CQ8TF44 421 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 SKA1Q96BD8 255 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 RNFT2Q96EX2 444 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 AK8Q96MA6 479 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 TEFMQ96QE5 360 aaKnown RBP4.82□□□□□ -1.64
COPS3-204ENST00000462236 ACCSQ96QU6 501 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 CCNL2Q96S94 520 aaPredicted RBP4.82□□□□□ -1.64
COPS3-204ENST00000462236 LLPHQ9BRT6 129 aaKnown RBP4.82□□□□□ -1.64
COPS3-204ENST00000462236 FGFBP2Q9BYJ0 223 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 NEUROG2Q9H2A3 272 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 Q9N2J8 555 aa4.82□□□□□ -1.64
COPS3-204ENST00000462236 OLFML3Q9NRN5 406 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms