RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 OR1D4P47884 311 aa16.46■□□□□ 0.23
TOP3A-202ENST00000461127 NR2C2P49116 596 aa16.46■□□□□ 0.23
TOP3A-202ENST00000461127 RAB28P51157 221 aa16.46■□□□□ 0.23
TOP3A-202ENST00000461127 ART1P52961 327 aa16.46■□□□□ 0.23
TOP3A-202ENST00000461127 DYNLT1P63172 113 aa16.46■□□□□ 0.23
TOP3A-202ENST00000461127 FAM214AQ32MH5 1076 aa16.46■□□□□ 0.23
TOP3A-202ENST00000461127 LRRC38Q5VT99 294 aa16.46■□□□□ 0.23
TOP3A-202ENST00000461127 NDUFAF7Q7L592 441 aa16.46■□□□□ 0.23
TOP3A-202ENST00000461127 PID1Q7Z2X4 250 aa16.46■□□□□ 0.23
TOP3A-202ENST00000461127 SNX20Q7Z614 316 aa16.46■□□□□ 0.23
TOP3A-202ENST00000461127 SIRT6Q8N6T7 355 aa16.46■□□□□ 0.23
TOP3A-202ENST00000461127 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.46■□□□□ 0.23
TOP3A-202ENST00000461127 OXNAD1Q96HP4 312 aaPredicted RBP16.46■□□□□ 0.23
TOP3A-202ENST00000461127 HES6Q96HZ4 224 aa16.46■□□□□ 0.23
TOP3A-202ENST00000461127 INTS7Q9NVH2 962 aaKnown RBP16.46■□□□□ 0.23
TOP3A-202ENST00000461127 TINAGQ9UJW2 476 aa16.46■□□□□ 0.23
TOP3A-202ENST00000461127 BMP10O95393 424 aa16.45■□□□□ 0.22
TOP3A-202ENST00000461127 F10P00742 488 aa16.45■□□□□ 0.22
TOP3A-202ENST00000461127 SERPINA7P05543 415 aa16.45■□□□□ 0.22
TOP3A-202ENST00000461127 CD99P14209 185 aa16.45■□□□□ 0.22
TOP3A-202ENST00000461127 HOXB4P17483 251 aaPredicted RBP16.45■□□□□ 0.22
TOP3A-202ENST00000461127 MAGP20916 626 aa16.45■□□□□ 0.22
TOP3A-202ENST00000461127 RWDD2BP57060 319 aa16.45■□□□□ 0.22
TOP3A-202ENST00000461127 XIAPP98170 497 aa16.45■□□□□ 0.22
TOP3A-202ENST00000461127 KLC1Q07866 573 aa16.45■□□□□ 0.22
TOP3A-202ENST00000461127 WASHC5Q12768 1159 aa16.45■□□□□ 0.22
TOP3A-202ENST00000461127 ZNF658BQ4V348 819 aaPredicted RBP16.45■□□□□ 0.22
TOP3A-202ENST00000461127 TFDP3Q5H9I0 405 aa16.45■□□□□ 0.22
TOP3A-202ENST00000461127 ZC3H12BQ5HYM0 836 aaKnown RBP16.45■□□□□ 0.22
TOP3A-202ENST00000461127 CNSTQ6PJW8 725 aa16.45■□□□□ 0.22
TOP3A-202ENST00000461127 MEX3BQ6ZN04 569 aaKnown RBP16.45■□□□□ 0.22
TOP3A-202ENST00000461127 ADAMTS18Q8TE60 1221 aa16.45■□□□□ 0.22
TOP3A-202ENST00000461127 PSMF1Q92530 271 aa16.45■□□□□ 0.22
TOP3A-202ENST00000461127 MIEF2Q96C03 454 aa16.45■□□□□ 0.22
TOP3A-202ENST00000461127 C8orf44Q96CB5 159 aa16.45■□□□□ 0.22
TOP3A-202ENST00000461127 VAT1Q99536 393 aa16.45■□□□□ 0.22
TOP3A-202ENST00000461127 RNF32Q9H0A6 362 aa16.45■□□□□ 0.22
TOP3A-202ENST00000461127 ENKD1Q9H0I2 346 aa16.45■□□□□ 0.22
TOP3A-202ENST00000461127 DDX56Q9NY93 547 aaKnown RBP16.45■□□□□ 0.22
TOP3A-202ENST00000461127 ZDHHC3Q9NYG2 299 aa16.45■□□□□ 0.22
TOP3A-202ENST00000461127 C3orf18Q9UK00 162 aa16.45■□□□□ 0.22
TOP3A-202ENST00000461127 PCDHA3Q9Y5H8 950 aa16.45■□□□□ 0.22
TOP3A-202ENST00000461127 A0A1B0GTL3 188 aa16.44■□□□□ 0.22
TOP3A-202ENST00000461127 C3orf70A6NLC5 250 aaPredicted RBP16.44■□□□□ 0.22
TOP3A-202ENST00000461127 LIN7AO14910 233 aaPredicted RBP16.44■□□□□ 0.22
TOP3A-202ENST00000461127 PRAMEF2O60811 474 aa16.44■□□□□ 0.22
TOP3A-202ENST00000461127 CRTAMO95727 393 aa16.44■□□□□ 0.22
TOP3A-202ENST00000461127 WDPCPO95876 746 aa16.44■□□□□ 0.22
TOP3A-202ENST00000461127 KRT1P04264 644 aa16.44■□□□□ 0.22
TOP3A-202ENST00000461127 CXCR2P25025 360 aa16.44■□□□□ 0.22
TOP3A-202ENST00000461127 MARCKSL1P49006 195 aa16.44■□□□□ 0.22
TOP3A-202ENST00000461127 AP2B1P63010 937 aa16.44■□□□□ 0.22
TOP3A-202ENST00000461127 CSNK1G2P78368 415 aa16.44■□□□□ 0.22
TOP3A-202ENST00000461127 SRSF11Q05519 484 aaKnown RBP16.44■□□□□ 0.22
TOP3A-202ENST00000461127 LONRF1Q17RB8 773 aa16.44■□□□□ 0.22
TOP3A-202ENST00000461127 GPR33Q49SQ1 333 aa16.44■□□□□ 0.22
TOP3A-202ENST00000461127 ATG9BQ674R7 924 aa16.44■□□□□ 0.22
TOP3A-202ENST00000461127 RIPOR1Q6ZS17 1223 aa16.44■□□□□ 0.22
TOP3A-202ENST00000461127 PRSS58Q8IYP2 241 aa16.44■□□□□ 0.22
TOP3A-202ENST00000461127 MMP21Q8N119 569 aa16.44■□□□□ 0.22
TOP3A-202ENST00000461127 METTL27Q8N6F8 245 aaPredicted RBP16.44■□□□□ 0.22
TOP3A-202ENST00000461127 OR5K2Q8NHB8 316 aa16.44■□□□□ 0.22
TOP3A-202ENST00000461127 STT3BQ8TCJ2 826 aa16.44■□□□□ 0.22
TOP3A-202ENST00000461127 KRT35Q92764 455 aa16.44■□□□□ 0.22
TOP3A-202ENST00000461127 SLC22A18Q96BI1 424 aa16.44■□□□□ 0.22
TOP3A-202ENST00000461127 FAM96AQ9H5X1 160 aa16.44■□□□□ 0.22
TOP3A-202ENST00000461127 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.44■□□□□ 0.22
TOP3A-202ENST00000461127 ZNF282Q9UDV7 671 aaPredicted RBP16.44■□□□□ 0.22
TOP3A-202ENST00000461127 SNX12Q9UMY4 172 aa16.44■□□□□ 0.22
TOP3A-202ENST00000461127 MAU2Q9Y6X3 613 aa16.44■□□□□ 0.22
TOP3A-202ENST00000461127 IGLV3-16A0A075B6K0 115 aa16.43■□□□□ 0.22
TOP3A-202ENST00000461127 FAM155BO75949 473 aa16.43■□□□□ 0.22
TOP3A-202ENST00000461127 URI1O94763 535 aaPredicted RBP16.43■□□□□ 0.22
TOP3A-202ENST00000461127 AP2A1O95782 977 aa16.43■□□□□ 0.22
TOP3A-202ENST00000461127 ZGLP1P0C6A0 271 aa16.43■□□□□ 0.22
TOP3A-202ENST00000461127 TCP1P17987 556 aaKnown RBP16.43■□□□□ 0.22
TOP3A-202ENST00000461127 CETN2P41208 172 aa16.43■□□□□ 0.22
TOP3A-202ENST00000461127 CDSNQ15517 529 aa16.43■□□□□ 0.22
TOP3A-202ENST00000461127 KRTCAP3Q53RY4 240 aa16.43■□□□□ 0.22
TOP3A-202ENST00000461127 ABHD17BQ5VST6 288 aa16.43■□□□□ 0.22
TOP3A-202ENST00000461127 KATNAL2Q8IYT4 538 aa16.43■□□□□ 0.22
TOP3A-202ENST00000461127 ZNF567Q8N184 647 aa16.43■□□□□ 0.22
TOP3A-202ENST00000461127 SELENOSQ9BQE4 189 aa16.43■□□□□ 0.22
TOP3A-202ENST00000461127 ZNF304Q9HCX3 659 aa16.43■□□□□ 0.22
TOP3A-202ENST00000461127 RIC8BQ9NVN3 520 aa16.43■□□□□ 0.22
TOP3A-202ENST00000461127 RSPH14Q9UHP6 348 aa16.43■□□□□ 0.22
TOP3A-202ENST00000461127 PLAGL1Q9UM63 463 aa16.43■□□□□ 0.22
TOP3A-202ENST00000461127 KLHL20Q9Y2M5 609 aa16.43■□□□□ 0.22
TOP3A-202ENST00000461127 MEMO1Q9Y316 297 aa16.43■□□□□ 0.22
TOP3A-202ENST00000461127 SAR1BQ9Y6B6 198 aa16.43■□□□□ 0.22
TOP3A-202ENST00000461127 OR5H15A6NDH6 313 aa16.42■□□□□ 0.22
TOP3A-202ENST00000461127 AGTP01019 485 aa16.42■□□□□ 0.22
TOP3A-202ENST00000461127 COX6A1P12074 109 aa16.42■□□□□ 0.22
TOP3A-202ENST00000461127 MCM3P25205 808 aa16.42■□□□□ 0.22
TOP3A-202ENST00000461127 ACRV1P26436 265 aa16.42■□□□□ 0.22
TOP3A-202ENST00000461127 PEBP1P30086 187 aaKnown RBP16.42■□□□□ 0.22
TOP3A-202ENST00000461127 GEMP55040 296 aa16.42■□□□□ 0.22
TOP3A-202ENST00000461127 CACNG1Q06432 222 aa16.42■□□□□ 0.22
TOP3A-202ENST00000461127 TFDP2Q14188 446 aa16.42■□□□□ 0.22
TOP3A-202ENST00000461127 SEL1L2Q5TEA6 688 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms