RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 WDR43Q15061 677 aaKnown RBP eCLIP3.22□□□□□ -1.89
VPS8-215ENST00000460158 HFEQ30201 348 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 KRT71Q3SY84 523 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 SHEQ5VZ18 495 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 PM20D1Q6GTS8 502 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 SPSB3Q6PJ21 355 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 MFSD7Q6UXD7 560 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 UNQ6126/PRO20091Q6UXV3 157 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 TPRG1Q6ZUI0 275 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 ASB18Q6ZVZ8 466 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 KBTBD6Q86V97 674 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 KMT5CQ86Y97 462 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 MCEMP1Q8IX19 187 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.22□□□□□ -1.89
VPS8-215ENST00000460158 PM20D2Q8IYS1 436 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 IQUBQ8NA54 791 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 ATAD1Q8NBU5 361 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 DNAAF4Q8WXU2 420 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 NRBF2Q96F24 287 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 CFAP57Q96MR6 1250 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 DUX5Q96PT3 197 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 KCNK16Q96T55 309 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 DDOQ99489 341 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 MGME1Q9BQP7 344 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 ERP44Q9BS26 406 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 SYT17Q9BSW7 474 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 THUMPD2Q9BTF0 503 aaKnown RBP3.22□□□□□ -1.89
VPS8-215ENST00000460158 MLPHQ9BV36 600 aaPredicted RBP3.22□□□□□ -1.89
VPS8-215ENST00000460158 TUBB2BQ9BVA1 445 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 CARD6Q9BX69 1037 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 PUS3Q9BZE2 481 aaKnown RBP3.22□□□□□ -1.89
VPS8-215ENST00000460158 RAD21L1Q9H4I0 556 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 EHD1Q9H4M9 534 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 EBF2Q9HAK2 575 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 GLRX2Q9NS18 164 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 ARHGEF38Q9NXL2 777 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 KLHL9Q9P2J3 617 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 DNAJB4Q9UDY4 337 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 AMACRQ9UHK6 382 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 PLAGL1Q9UM63 463 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 KCNK7Q9Y2U2 307 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 CHTOPQ9Y3Y2 248 aaKnown RBP3.22□□□□□ -1.89
VPS8-215ENST00000460158 PCDHGA5Q9Y5G8 931 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 V9GYY5 206 aaPredicted RBP3.22□□□□□ -1.89
VPS8-215ENST00000460158 CFAP65Q6ZU64 1925 aaKnown RBP3.22□□□□□ -1.89
VPS8-215ENST00000460158 KDRP35968 1356 aa3.22□□□□□ -1.89
VPS8-215ENST00000460158 KIF16BQ96L93 1317 aa3.21□□□□□ -1.89
VPS8-215ENST00000460158 A0A1B0GUV1 79 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 LNP1A1A4G5 178 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 DENND3A2RUS2 1198 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 TMCO5BA8MYB1 307 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 H0YIV9 168 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 TMEM178BH3BS89 294 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 RASGRF2O14827 1237 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 ADAMDEC1O15204 470 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 SLC16A5O15375 505 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 POLR2DO15514 142 aaKnown RBP3.21□□□□□ -1.9
VPS8-215ENST00000460158 WISP2O76076 250 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 AKR7A3O95154 331 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 C22orf31O95567 290 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 DIRAS3O95661 229 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 PLGP00747 810 aaPredicted RBP3.21□□□□□ -1.9
VPS8-215ENST00000460158 PENKP01210 267 aaPredicted RBP3.21□□□□□ -1.9
VPS8-215ENST00000460158 GH2P01242 217 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 PRLRP16471 622 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 POLR2CP19387 275 aaPredicted RBP3.21□□□□□ -1.9
VPS8-215ENST00000460158 NMBRP28336 390 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 RFC4P35249 363 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 SOAT1P35610 550 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 HSD17B2P37059 387 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 DHPSP49366 369 aaPredicted RBP3.21□□□□□ -1.9
VPS8-215ENST00000460158 PNLIPRP2P54317 469 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 VCPP55072 806 aaKnown RBP3.21□□□□□ -1.9
VPS8-215ENST00000460158 NME5P56597 212 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 TRA2BP62995 288 aaKnown RBP3.21□□□□□ -1.9
VPS8-215ENST00000460158 GFPT1Q06210 699 aaPredicted RBP3.21□□□□□ -1.9
VPS8-215ENST00000460158 SPAG1Q07617 926 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 ELP6Q0PNE2 266 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 CHIT1Q13231 466 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 TRA2AQ13595 282 aaKnown RBP eCLIP3.21□□□□□ -1.9
VPS8-215ENST00000460158 GTF2H2Q13888 395 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 MVPQ14764 893 aaKnown RBP3.21□□□□□ -1.9
VPS8-215ENST00000460158 MEP1AQ16819 746 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 HADHQ16836 314 aaKnown RBP3.21□□□□□ -1.9
VPS8-215ENST00000460158 CCDC57Q2TAC2 916 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 LETM2Q2VYF4 491 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 CCDC152Q4G0S7 254 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 KCTD21Q4G0X4 260 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 TMEM35AQ53FP2 167 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 IGSF11Q5DX21 431 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 STXBP5Q5T5C0 1151 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 LCE1EQ5T753 118 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 OR7E24Q6IFN5 339 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 GTF2H2CQ6P1K8 395 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 KLC3Q6P597 504 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 ZCCHC12Q6PEW1 402 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 RBM43Q6ZSC3 357 aaKnown RBP3.21□□□□□ -1.9
VPS8-215ENST00000460158 TUBA1AQ71U36 451 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 Q75L30 129 aa3.21□□□□□ -1.9
VPS8-215ENST00000460158 ZNF534Q76KX8 674 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms