RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 PPHLN1Q8NEY8 458 aaKnown RBP20.61■□□□□ 0.89
CPNE1-220ENST00000458038 MAGEC3Q8TD91 643 aa20.61■□□□□ 0.89
CPNE1-220ENST00000458038 ZNF778Q96MU6 729 aa20.61■□□□□ 0.89
CPNE1-220ENST00000458038 LMF1Q96S06 567 aa20.61■□□□□ 0.89
CPNE1-220ENST00000458038 CATSPERZQ9NTU4 200 aa20.61■□□□□ 0.89
CPNE1-220ENST00000458038 ZNF148Q9UQR1 794 aa20.61■□□□□ 0.89
CPNE1-220ENST00000458038 FAM169AQ9Y6X4 670 aa20.61■□□□□ 0.89
CPNE1-220ENST00000458038 ABCA12Q86UK0 2595 aa20.61■□□□□ 0.89
CPNE1-220ENST00000458038 AP3B1O00203 1094 aa20.6■□□□□ 0.89
CPNE1-220ENST00000458038 LIASO43766 372 aa20.6■□□□□ 0.89
CPNE1-220ENST00000458038 FTCDO95954 541 aa20.6■□□□□ 0.89
CPNE1-220ENST00000458038 IFNB1P01574 187 aa20.6■□□□□ 0.89
CPNE1-220ENST00000458038 EDN3P14138 238 aa20.6■□□□□ 0.89
CPNE1-220ENST00000458038 GRIA3P42263 894 aa20.6■□□□□ 0.89
CPNE1-220ENST00000458038 ZNF75DP51815 510 aa20.6■□□□□ 0.89
CPNE1-220ENST00000458038 OCA2Q04671 838 aa20.6■□□□□ 0.89
CPNE1-220ENST00000458038 ZNF169Q14929 603 aaPredicted RBP20.6■□□□□ 0.89
CPNE1-220ENST00000458038 HIF1AQ16665 826 aa20.6■□□□□ 0.89
CPNE1-220ENST00000458038 PTRHD1Q6GMV3 140 aaKnown RBP20.6■□□□□ 0.89
CPNE1-220ENST00000458038 OR11G2Q8NGC1 345 aa20.6■□□□□ 0.89
CPNE1-220ENST00000458038 FOPNLQ96NB1 174 aa20.6■□□□□ 0.89
CPNE1-220ENST00000458038 IL17FQ96PD4 163 aa20.6■□□□□ 0.89
CPNE1-220ENST00000458038 ZNF304Q9HCX3 659 aa20.6■□□□□ 0.89
CPNE1-220ENST00000458038 RAB6BQ9NRW1 208 aa20.6■□□□□ 0.89
CPNE1-220ENST00000458038 GNPTGQ9UJJ9 305 aa20.6■□□□□ 0.89
CPNE1-220ENST00000458038 IQCF5A8MTL0 148 aa20.59■□□□□ 0.89
CPNE1-220ENST00000458038 CD3EAPO15446 510 aaKnown RBP20.59■□□□□ 0.89
CPNE1-220ENST00000458038 COL8A1P27658 744 aa20.59■□□□□ 0.89
CPNE1-220ENST00000458038 GRIA1P42261 906 aa20.59■□□□□ 0.89
CPNE1-220ENST00000458038 CDC16Q13042 620 aa20.59■□□□□ 0.89
CPNE1-220ENST00000458038 SEMA3AQ14563 771 aa20.59■□□□□ 0.89
CPNE1-220ENST00000458038 PCID2Q5JVF3 399 aa20.59■□□□□ 0.89
CPNE1-220ENST00000458038 WASHC2DQ5SRD0 308 aa20.59■□□□□ 0.89
CPNE1-220ENST00000458038 RPUSD3Q6P087 351 aaKnown RBP20.59■□□□□ 0.89
CPNE1-220ENST00000458038 ISLR2Q6UXK2 745 aa20.59■□□□□ 0.89
CPNE1-220ENST00000458038 PARP9Q8IXQ6 854 aa20.59■□□□□ 0.89
CPNE1-220ENST00000458038 FAR1Q8WVX9 515 aa20.59■□□□□ 0.89
CPNE1-220ENST00000458038 ATG4AQ8WYN0 398 aa20.59■□□□□ 0.89
CPNE1-220ENST00000458038 BAG1Q99933 345 aaPredicted RBP20.59■□□□□ 0.89
CPNE1-220ENST00000458038 SOX17Q9H6I2 414 aaPredicted RBP20.59■□□□□ 0.89
CPNE1-220ENST00000458038 PAK5Q9P286 719 aa20.59■□□□□ 0.89
CPNE1-220ENST00000458038 CTSFQ9UBX1 484 aa20.59■□□□□ 0.89
CPNE1-220ENST00000458038 TTC7AQ9ULT0 858 aaPredicted RBP20.59■□□□□ 0.89
CPNE1-220ENST00000458038 HYKKA2RU49 373 aa20.58■□□□□ 0.89
CPNE1-220ENST00000458038 C1orf105O95561 183 aa20.58■□□□□ 0.89
CPNE1-220ENST00000458038 HPP00738 406 aa20.58■□□□□ 0.89
CPNE1-220ENST00000458038 APRTP07741 180 aa20.58■□□□□ 0.89
CPNE1-220ENST00000458038 RPS3P23396 243 aaKnown RBP eCLIP20.58■□□□□ 0.896e-8■■■□□ 18.1
CPNE1-220ENST00000458038 MCM3P25205 808 aa20.58■□□□□ 0.89
CPNE1-220ENST00000458038 OR1D4P47884 311 aa20.58■□□□□ 0.89
CPNE1-220ENST00000458038 VSX2P58304 361 aaPredicted RBP20.58■□□□□ 0.89
CPNE1-220ENST00000458038 SEL1L2Q5TEA6 688 aa20.58■□□□□ 0.89
CPNE1-220ENST00000458038 C4orf22Q6V702 233 aa20.58■□□□□ 0.89
CPNE1-220ENST00000458038 OTOAQ7RTW8 1153 aa20.58■□□□□ 0.89
CPNE1-220ENST00000458038 TAX1BP1Q86VP1 789 aa20.58■□□□□ 0.89
CPNE1-220ENST00000458038 TMEM151BQ8IW70 566 aa20.58■□□□□ 0.89
CPNE1-220ENST00000458038 RNF10Q8N5U6 811 aaKnown RBP20.58■□□□□ 0.89
CPNE1-220ENST00000458038 CCDC89Q8N998 374 aa20.58■□□□□ 0.89
CPNE1-220ENST00000458038 LKAAEAR1Q8TD35 194 aa20.58■□□□□ 0.89
CPNE1-220ENST00000458038 GRHL3Q8TE85 626 aa20.58■□□□□ 0.89
CPNE1-220ENST00000458038 ZDHHC19Q8WVZ1 309 aaPredicted RBP20.58■□□□□ 0.89
CPNE1-220ENST00000458038 THOC3Q96J01 351 aaKnown RBP20.58■□□□□ 0.89
CPNE1-220ENST00000458038 CRB3Q9BUF7 120 aa20.58■□□□□ 0.89
CPNE1-220ENST00000458038 ZNF282Q9UDV7 671 aaPredicted RBP20.58■□□□□ 0.89
CPNE1-220ENST00000458038 HEATR5BQ9P2D3 2071 aa20.58■□□□□ 0.88
CPNE1-220ENST00000458038 CTSVO60911 334 aa20.57■□□□□ 0.88
CPNE1-220ENST00000458038 PHF2O75151 1096 aa20.57■□□□□ 0.88
CPNE1-220ENST00000458038 NDUFS3O75489 264 aa20.57■□□□□ 0.88
CPNE1-220ENST00000458038 ACPPP15309 386 aa20.57■□□□□ 0.88
CPNE1-220ENST00000458038 FDXRP22570 491 aa20.57■□□□□ 0.88
CPNE1-220ENST00000458038 EMP3P54852 163 aa20.57■□□□□ 0.88
CPNE1-220ENST00000458038 MFAP5Q13361 173 aa20.57■□□□□ 0.88
CPNE1-220ENST00000458038 MUM1Q2TAK8 710 aa20.57■□□□□ 0.88
CPNE1-220ENST00000458038 KRT222Q8N1A0 295 aa20.57■□□□□ 0.88
CPNE1-220ENST00000458038 OR2L3Q8NG85 312 aa20.57■□□□□ 0.88
CPNE1-220ENST00000458038 STT3BQ8TCJ2 826 aa20.57■□□□□ 0.88
CPNE1-220ENST00000458038 SKA2Q8WVK7 121 aaPredicted RBP20.57■□□□□ 0.88
CPNE1-220ENST00000458038 MIEF2Q96C03 454 aa20.57■□□□□ 0.88
CPNE1-220ENST00000458038 IL22Q9GZX6 179 aa20.57■□□□□ 0.88
CPNE1-220ENST00000458038 P2RY12Q9H244 342 aa20.57■□□□□ 0.88
CPNE1-220ENST00000458038 CHRAC1Q9NRG0 131 aa20.57■□□□□ 0.88
CPNE1-220ENST00000458038 SPATA7Q9P0W8 599 aa20.57■□□□□ 0.88
CPNE1-220ENST00000458038 CIDEBQ9UHD4 219 aa20.57■□□□□ 0.88
CPNE1-220ENST00000458038 CDC14AQ9UNH5 594 aa20.57■□□□□ 0.88
CPNE1-220ENST00000458038 CSAG2Q9Y5P2 127 aa20.57■□□□□ 0.88
CPNE1-220ENST00000458038 PCDH17O14917 1159 aa20.56■□□□□ 0.88
CPNE1-220ENST00000458038 PFDN6O15212 129 aa20.56■□□□□ 0.88
CPNE1-220ENST00000458038 ZGLP1P0C6A0 271 aa20.56■□□□□ 0.88
CPNE1-220ENST00000458038 FAM180AQ6UWF9 173 aa20.56■□□□□ 0.88
CPNE1-220ENST00000458038 SHISA6Q6ZSJ9 500 aa20.56■□□□□ 0.88
CPNE1-220ENST00000458038 TICAM1Q8IUC6 712 aa20.56■□□□□ 0.88
CPNE1-220ENST00000458038 OR2A1Q8NGT9 310 aa20.56■□□□□ 0.88
CPNE1-220ENST00000458038 CNDP1Q96KN2 507 aa20.56■□□□□ 0.88
CPNE1-220ENST00000458038 EIF2B3Q9NR50 452 aaKnown RBP20.56■□□□□ 0.88
CPNE1-220ENST00000458038 MARCH4Q9P2E8 410 aaPredicted RBP20.56■□□□□ 0.88
CPNE1-220ENST00000458038 ZC3H7BQ9UGR2 993 aaKnown RBP20.56■□□□□ 0.88
CPNE1-220ENST00000458038 IGLV3-12A0A075B6K2 115 aa20.55■□□□□ 0.88
CPNE1-220ENST00000458038 A0A1B0GUH1 482 aa20.55■□□□□ 0.88
CPNE1-220ENST00000458038 MAP2K7O14733 419 aa20.55■□□□□ 0.88
CPNE1-220ENST00000458038 PRPF4O43172 522 aaKnown RBP eCLIP20.55■□□□□ 0.882e-8■□□□□ 11.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms