RNA–Protein interactions for RNA: ENST00000457055.1

VPS41-209, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-209ENST00000457055 PSMD4P55036 377 aaKnown RBP5.28□□□□□ -1.56
VPS41-209ENST00000457055 SESN2P58004 480 aaPredicted RBP5.28□□□□□ -1.56
VPS41-209ENST00000457055 PRPS1P60891 318 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 SPCS3P61009 180 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 IRF9Q00978 393 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 RHAGQ02094 409 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 LRRC63Q05C16 580 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 CYP24A1Q07973 514 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 MGAT5Q09328 741 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 AIMP2Q13155 320 aaKnown RBP5.28□□□□□ -1.56
VPS41-209ENST00000457055 SNTB1Q13884 538 aaKnown RBP5.28□□□□□ -1.56
VPS41-209ENST00000457055 FGL2Q14314 439 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 MED22Q15528 200 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 SYT16Q17RD7 645 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 KRTAP15-1Q3LI76 137 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 TBRG1Q3YBR2 411 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 ZCWPW2Q504Y3 356 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 TAF1BQ53T94 588 aaPredicted RBP5.28□□□□□ -1.56
VPS41-209ENST00000457055 C2CD6Q53TS8 623 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 CDKL4Q5MAI5 379 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 AGBL2Q5U5Z8 902 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 SULT1C3Q6IMI6 304 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 INO80CQ6PI98 192 aaPredicted RBP5.28□□□□□ -1.56
VPS41-209ENST00000457055 MOXD1Q6UVY6 613 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 COPS6Q7L5N1 327 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 ZNF627Q7L945 461 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 OVCH1Q7RTY7 1134 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 PAGE2Q7Z2X7 111 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 TRAPPC11Q7Z392 1133 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 HAUS6Q7Z4H7 955 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 SPATA19Q7Z5L4 167 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 VTCN1Q7Z7D3 282 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 PLA2G4DQ86XP0 818 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 TICAM1Q8IUC6 712 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 LINC00518Q8N0U6 118 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 SLC15A4Q8N697 577 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 MB21D1Q8N884 522 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 ZNF366Q8N895 744 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 CCNYQ8ND76 341 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 OR8J1Q8NGP2 316 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 ELP5Q8TE02 316 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 TAS1R2Q8TE23 839 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 DUSP19Q8WTR2 217 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 P3H4Q92791 437 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 SLC7A6OSQ96CW6 309 aaPredicted RBP5.28□□□□□ -1.56
VPS41-209ENST00000457055 SERAC1Q96JX3 654 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 QRFPRQ96P65 431 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 VPS35Q96QK1 796 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 ZNF416Q9BWM5 594 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 OSBPL6Q9BZF3 934 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 TWSG1Q9GZX9 223 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 SLC22A4Q9H015 551 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 KCNN2Q9H2S1 579 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 GOLPH3LQ9H4A5 285 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 SAV1Q9H4B6 383 aaPredicted RBP5.28□□□□□ -1.56
VPS41-209ENST00000457055 RGCCQ9H4X1 137 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 CHODLQ9H9P2 273 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 NECTIN3Q9NQS3 549 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 PRMT8Q9NR22 394 aaPredicted RBP5.28□□□□□ -1.56
VPS41-209ENST00000457055 TLR8Q9NR97 1041 aaKnown RBP5.28□□□□□ -1.56
VPS41-209ENST00000457055 ZNF275Q9NSD4 429 aaPredicted RBP5.28□□□□□ -1.56
VPS41-209ENST00000457055 PARVAQ9NVD7 372 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 ARL8BQ9NVJ2 186 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 ELOVL2Q9NXB9 296 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 MPP6Q9NZW5 540 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 NYAP2Q9P242 653 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 KLHL8Q9P2G9 620 aaPredicted RBP5.28□□□□□ -1.56
VPS41-209ENST00000457055 ZNF229Q9UJW7 825 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 KCND3Q9UK17 655 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 MAN1B1Q9UKM7 699 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 CDH9Q9ULB4 789 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 GABRQQ9UN88 632 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 CDC14AQ9UNH5 594 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 SHOC2Q9UQ13 582 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 PCDHB1Q9Y5F3 818 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 BCL9O00512 1426 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 PIK3C2AO00443 1686 aa5.28□□□□□ -1.56
VPS41-209ENST00000457055 ARFGEF1Q9Y6D6 1849 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 MAP3K15Q6ZN16 1313 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 HELTA6NFD8 242 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 CFAP73A6NFT4 308 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 NPIPB15A6NHN6 443 aaPredicted RBP5.27□□□□□ -1.57
VPS41-209ENST00000457055 GABRR3A8MPY1 467 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 A8MXQ7 604 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 E5RI56 91 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 NPIPA2E9PIF3 369 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 CTDSP2O14595 271 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 SLC9A3R1O14745 358 aaPredicted RBP5.27□□□□□ -1.57
VPS41-209ENST00000457055 PDE9AO76083 593 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 NDST3O95803 873 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 DDAH2O95865 285 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 MBD3O95983 291 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 PEX11BO96011 259 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 MBP02144 154 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 GCP02774 474 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 FTLP02792 175 aaPredicted RBP5.27□□□□□ -1.57
VPS41-209ENST00000457055 ANXA1P04083 346 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 GNAO1P09471 354 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 KITP10721 976 aa5.27□□□□□ -1.57
VPS41-209ENST00000457055 SLC2A3P11169 496 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms