RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 SP140Q13342 867 aa22.29■■□□□ 1.16
CBX3-204ENST00000456948 FASTKD3Q14CZ7 662 aaKnown RBP22.29■■□□□ 1.16
CBX3-204ENST00000456948 ZIC1Q15915 447 aa22.29■■□□□ 1.16
CBX3-204ENST00000456948 EEF1AKMT2Q5JPI9 291 aaKnown RBP22.29■■□□□ 1.16
CBX3-204ENST00000456948 C16orf46Q6P387 395 aa22.29■■□□□ 1.16
CBX3-204ENST00000456948 BORAQ6PGQ7 559 aa22.29■■□□□ 1.16
CBX3-204ENST00000456948 PAQR3Q6TCH7 311 aa22.29■■□□□ 1.16
CBX3-204ENST00000456948 CYS1Q717R9 158 aa22.29■■□□□ 1.16
CBX3-204ENST00000456948 MCATQ8IVS2 390 aaKnown RBP22.29■■□□□ 1.16
CBX3-204ENST00000456948 DSELQ8IZU8 1212 aa22.29■■□□□ 1.16
CBX3-204ENST00000456948 OR2L3Q8NG85 312 aa22.29■■□□□ 1.16
CBX3-204ENST00000456948 CT55Q8WUE5 264 aa22.29■■□□□ 1.16
CBX3-204ENST00000456948 EEF1AKMT1Q8WVE0 214 aa22.29■■□□□ 1.16
CBX3-204ENST00000456948 TTC9Q92623 222 aa22.29■■□□□ 1.16
CBX3-204ENST00000456948 DLG3Q92796 817 aa22.29■■□□□ 1.16
CBX3-204ENST00000456948 RNF31Q96EP0 1072 aa22.29■■□□□ 1.16
CBX3-204ENST00000456948 CCDC138Q96M89 665 aa22.29■■□□□ 1.16
CBX3-204ENST00000456948 PKP4Q99569 1192 aa22.29■■□□□ 1.16
CBX3-204ENST00000456948 TXLNGQ9NUQ3 528 aa22.29■■□□□ 1.16
CBX3-204ENST00000456948 EURLQ9NYK6 297 aa22.29■■□□□ 1.16
CBX3-204ENST00000456948 GRHL1Q9NZI5 618 aa22.29■■□□□ 1.16
CBX3-204ENST00000456948 IL17BQ9UHF5 180 aa22.29■■□□□ 1.16
CBX3-204ENST00000456948 C9J4A7 227 aa22.28■■□□□ 1.16
CBX3-204ENST00000456948 ZSCAN9O15535 394 aaPredicted RBP22.28■■□□□ 1.16
CBX3-204ENST00000456948 PRICKLE3O43900 615 aaPredicted RBP22.28■■□□□ 1.16
CBX3-204ENST00000456948 SRPX2O60687 465 aaPredicted RBP22.28■■□□□ 1.16
CBX3-204ENST00000456948 ERGP11308 486 aa22.28■■□□□ 1.16
CBX3-204ENST00000456948 ARSFP54793 590 aa22.28■■□□□ 1.16
CBX3-204ENST00000456948 SLC12A2P55011 1212 aa22.28■■□□□ 1.16
CBX3-204ENST00000456948 CDKN2DP55273 166 aa22.28■■□□□ 1.16
CBX3-204ENST00000456948 RBM20Q5T481 1227 aaKnown RBP22.28■■□□□ 1.16
CBX3-204ENST00000456948 THEMIS2Q5TEJ8 643 aa22.28■■□□□ 1.16
CBX3-204ENST00000456948 C3orf62Q6ZUJ4 267 aa22.28■■□□□ 1.16
CBX3-204ENST00000456948 PIWIL4Q7Z3Z4 852 aaKnown RBP22.28■■□□□ 1.16
CBX3-204ENST00000456948 CCDC25Q86WR0 208 aa22.28■■□□□ 1.16
CBX3-204ENST00000456948 OR2A1Q8NGT9 310 aa22.28■■□□□ 1.16
CBX3-204ENST00000456948 PROKR1Q8TCW9 393 aa22.28■■□□□ 1.16
CBX3-204ENST00000456948 LINGO1Q96FE5 620 aa22.28■■□□□ 1.16
CBX3-204ENST00000456948 MIPEPQ99797 713 aa22.28■■□□□ 1.16
CBX3-204ENST00000456948 WDR83Q9BRX9 315 aaKnown RBP22.28■■□□□ 1.16
CBX3-204ENST00000456948 PARVBQ9HBI1 364 aa22.28■■□□□ 1.16
CBX3-204ENST00000456948 PLAC1Q9HBJ0 212 aa22.28■■□□□ 1.16
CBX3-204ENST00000456948 MRPS30Q9NP92 439 aaKnown RBP22.28■■□□□ 1.16
CBX3-204ENST00000456948 ANKMY1Q9P2S6 941 aa22.28■■□□□ 1.16
CBX3-204ENST00000456948 FARSAQ9Y285 508 aaKnown RBP22.28■■□□□ 1.16
CBX3-204ENST00000456948 CTAGE15A4D2H0 777 aa22.27■■□□□ 1.16
CBX3-204ENST00000456948 NKX2-8O15522 239 aa22.27■■□□□ 1.16
CBX3-204ENST00000456948 CREG1O75629 220 aa22.27■■□□□ 1.16
CBX3-204ENST00000456948 SLC16A8O95907 504 aa22.27■■□□□ 1.16
CBX3-204ENST00000456948 CTAGE8P0CG41 777 aa22.27■■□□□ 1.16
CBX3-204ENST00000456948 PRKAR1AP10644 381 aa22.27■■□□□ 1.16
CBX3-204ENST00000456948 PTPN4P29074 926 aa22.27■■□□□ 1.16
CBX3-204ENST00000456948 GRIA3P42263 894 aa22.27■■□□□ 1.16
CBX3-204ENST00000456948 CCR10P46092 362 aa22.27■■□□□ 1.16
CBX3-204ENST00000456948 CYP4F2P78329 520 aa22.27■■□□□ 1.16
CBX3-204ENST00000456948 ABATP80404 500 aa22.27■■□□□ 1.16
CBX3-204ENST00000456948 CDC20Q12834 499 aa22.27■■□□□ 1.16
CBX3-204ENST00000456948 GPS2Q13227 327 aa22.27■■□□□ 1.16
CBX3-204ENST00000456948 DEFB110Q30KQ9 67 aa22.27■■□□□ 1.16
CBX3-204ENST00000456948 YOD1Q5VVQ6 348 aaPredicted RBP22.27■■□□□ 1.16
CBX3-204ENST00000456948 CAPN12Q6ZSI9 719 aa22.27■■□□□ 1.16
CBX3-204ENST00000456948 CTAGE6Q86UF2 777 aa22.27■■□□□ 1.16
CBX3-204ENST00000456948 CTAGE4Q8IX94 777 aa22.27■■□□□ 1.16
CBX3-204ENST00000456948 FAM20CQ8IXL6 584 aa22.27■■□□□ 1.16
CBX3-204ENST00000456948 EXTL1Q92935 676 aa22.27■■□□□ 1.16
CBX3-204ENST00000456948 SELENOSQ9BQE4 189 aa22.27■■□□□ 1.16
CBX3-204ENST00000456948 PCBD2Q9H0N5 130 aa22.27■■□□□ 1.16
CBX3-204ENST00000456948 TSPYL1Q9H0U9 437 aa22.27■■□□□ 1.16
CBX3-204ENST00000456948 PADI2Q9Y2J8 665 aa22.27■■□□□ 1.16
CBX3-204ENST00000456948 KLK4Q9Y5K2 254 aa22.27■■□□□ 1.16
CBX3-204ENST00000456948 ATRXP46100 2492 aa22.26■■□□□ 1.15
CBX3-204ENST00000456948 SNRNP200O75643 2136 aaKnown RBP22.26■■□□□ 1.15
CBX3-204ENST00000456948 RAB40ALP0C0E4 278 aa22.26■■□□□ 1.15
CBX3-204ENST00000456948 SAT1P21673 171 aa22.26■■□□□ 1.15
CBX3-204ENST00000456948 FDXRP22570 491 aa22.26■■□□□ 1.15
CBX3-204ENST00000456948 FASTKQ14296 549 aaKnown RBP22.26■■□□□ 1.15
CBX3-204ENST00000456948 GRM7Q14831 915 aa22.26■■□□□ 1.15
CBX3-204ENST00000456948 TBR1Q16650 682 aa22.26■■□□□ 1.15
CBX3-204ENST00000456948 RHBDD2Q6NTF9 364 aa22.26■■□□□ 1.15
CBX3-204ENST00000456948 FAM199XQ6PEV8 388 aaPredicted RBP22.26■■□□□ 1.15
CBX3-204ENST00000456948 NKAPQ8N5F7 415 aaKnown RBP22.26■■□□□ 1.15
CBX3-204ENST00000456948 TTC29Q8NA56 475 aaPredicted RBP22.26■■□□□ 1.15
CBX3-204ENST00000456948 FBXO25Q8TCJ0 367 aa22.26■■□□□ 1.15
CBX3-204ENST00000456948 ZNF480Q8WV37 535 aa22.26■■□□□ 1.15
CBX3-204ENST00000456948 LRRC1Q9BTT6 524 aa22.26■■□□□ 1.15
CBX3-204ENST00000456948 ACAT2Q9BWD1 397 aa22.26■■□□□ 1.15
CBX3-204ENST00000456948 NLNQ9BYT8 704 aa22.26■■□□□ 1.15
CBX3-204ENST00000456948 FAM129AQ9BZQ8 928 aa22.26■■□□□ 1.15
CBX3-204ENST00000456948 SPRTNQ9H040 489 aaPredicted RBP22.26■■□□□ 1.15
CBX3-204ENST00000456948 CHST8Q9H2A9 424 aa22.26■■□□□ 1.15
CBX3-204ENST00000456948 RHOJQ9H4E5 214 aa22.26■■□□□ 1.15
CBX3-204ENST00000456948 PCMTD2Q9NV79 361 aa22.26■■□□□ 1.15
CBX3-204ENST00000456948 MTRF1LQ9UGC7 380 aaKnown RBP22.26■■□□□ 1.15
CBX3-204ENST00000456948 GPN3Q9UHW5 284 aaPredicted RBP22.26■■□□□ 1.15
CBX3-204ENST00000456948 SNX7Q9UNH6 387 aa22.26■■□□□ 1.15
CBX3-204ENST00000456948 KLHL20Q9Y2M5 609 aa22.26■■□□□ 1.15
CBX3-204ENST00000456948 PIM1P11309 404 aaPredicted RBP22.25■■□□□ 1.15
CBX3-204ENST00000456948 CCND1P24385 295 aa22.25■■□□□ 1.15
CBX3-204ENST00000456948 SSTR1P30872 391 aa22.25■■□□□ 1.15
CBX3-204ENST00000456948 RORAP35398 523 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms