RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 NDST3O95803 873 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 CPA2P48052 419 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 DSTNP60981 165 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 CRYZQ08257 329 aaKnown RBP5.11□□□□□ -1.59
CSMD3-204ENST00000455883 SNAPC1Q16533 368 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 ACTBL2Q562R1 376 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 GARNL3Q5VVW2 1013 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 ARL9Q6T311 187 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 C1orf186Q6ZWK4 172 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 DDX53Q86TM3 631 aaKnown RBP5.11□□□□□ -1.59
CSMD3-204ENST00000455883 TSPYL5Q86VY4 417 aaPredicted RBP5.11□□□□□ -1.59
CSMD3-204ENST00000455883 PRELID2Q8N945 189 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 TMEM121BQ9BXQ6 578 aaPredicted RBP5.11□□□□□ -1.59
CSMD3-204ENST00000455883 DUSP16Q9BY84 665 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 TBC1D17Q9HA65 648 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 FNDC3AQ9Y2H6 1198 aaKnown RBP5.11□□□□□ -1.59
CSMD3-204ENST00000455883 SHOXO15266 292 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 NME6O75414 186 aaPredicted RBP5.11□□□□□ -1.59
CSMD3-204ENST00000455883 CSF1P09603 554 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 SLC2A5P22732 501 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 L1CAMP32004 1257 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 GTF2H2Q13888 395 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 CCINQ13939 588 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 TEX44Q53QW1 395 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 GTF2H2CQ6P1K8 395 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 SIMC1Q8NDZ2 872 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 OR8J1Q8NGP2 316 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 PRCCQ92733 491 aaPredicted RBP5.11□□□□□ -1.59
CSMD3-204ENST00000455883 TWNKQ96RR1 684 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 MAGEH1Q9H213 219 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 CCSER2Q9H7U1 834 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 GFOD1Q9NXC2 390 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 TNFRSF11BO00300 401 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 CNTN5O94779 1100 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 JCHAINP01591 159 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 RARAP10276 462 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 HLA-EP13747 358 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 MIPP30301 263 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 RYKP34925 604 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 MMP12P39900 470 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 MAZP56270 477 aaKnown RBP5.11□□□□□ -1.59
CSMD3-204ENST00000455883 NFKB2Q00653 900 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 SELPLGQ14242 412 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 WSCD2Q2TBF2 565 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 GPR107Q5VW38 600 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 BANPQ8N9N5 519 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 KIAA0895Q8NCT3 520 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 UPF1Q92900 1129 aaKnown RBP eCLIP5.11□□□□□ -1.59
CSMD3-204ENST00000455883 MFSD14AQ96MC6 490 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 USP21Q9UK80 565 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 DNM1LO00429 736 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 POLR1CO15160 346 aaPredicted RBP5.11□□□□□ -1.59
CSMD3-204ENST00000455883 SPTLC1O15269 473 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 PI15O43692 258 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 RPS5P46782 204 aaKnown RBP5.11□□□□□ -1.59
CSMD3-204ENST00000455883 ALDH3B2P48448 385 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 DGKGP49619 791 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 ART1P52961 327 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 SLC9A5Q14940 896 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 ZNF782Q6ZMW2 699 aaPredicted RBP5.11□□□□□ -1.59
CSMD3-204ENST00000455883 WDR88Q6ZMY6 472 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 ERMP1Q7Z2K6 904 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 ATG9AQ7Z3C6 839 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 CARM1Q86X55 608 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 UBR7Q8N806 425 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 OR7G2Q8NG99 324 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 JPH3Q8WXH2 748 aaPredicted RBP5.11□□□□□ -1.59
CSMD3-204ENST00000455883 C17orf62Q9BQA9 187 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 RTFDC1Q9BY42 306 aaPredicted RBP5.11□□□□□ -1.59
CSMD3-204ENST00000455883 MARCH2Q9P0N8 246 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 CHKBQ9Y259 395 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 LRRK1Q38SD2 2015 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 RENP00797 406 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 SLC35G6P0C7Q6 338 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 BMP1P13497 986 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 BACE1P56817 501 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 CAND1Q86VP6 1230 aaKnown RBP5.11□□□□□ -1.59
CSMD3-204ENST00000455883 SCUBE3Q8IX30 993 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 CBR4Q8N4T8 237 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 RSC1A1Q92681 617 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 KIAA1143Q96AT1 154 aaPredicted RBP5.11□□□□□ -1.59
CSMD3-204ENST00000455883 RAD51AP1Q96B01 352 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 LRIG1Q96JA1 1093 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 SDHAF3Q9NRP4 125 aa5.11□□□□□ -1.59
CSMD3-204ENST00000455883 DDX60LQ5H9U9 1706 aaKnown RBP5.1□□□□□ -1.59
CSMD3-204ENST00000455883 SPATA31A3Q5VYP0 1347 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 UGDHO60701 494 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 ZNF182P17025 639 aaPredicted RBP5.1□□□□□ -1.59
CSMD3-204ENST00000455883 FSHRP23945 695 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 SLC12A3P55017 1021 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 CBFBQ13951 182 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 SLAMF9Q96A28 289 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 MED8Q96G25 268 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 PHOX2BQ99453 314 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 CD180Q99467 661 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 LPIN3Q9BQK8 851 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 MINDY3Q9H8M7 445 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 L7N2F9 121 aa5.1□□□□□ -1.59
CSMD3-204ENST00000455883 POLRMTO00411 1230 aaKnown RBP5.1□□□□□ -1.59
CSMD3-204ENST00000455883 SYN3O14994 580 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms