RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 STRA8Q7Z7C7 330 aa16.68■□□□□ 0.26
USP39-208ENST00000455732 ZC3HC1Q86WB0 502 aaKnown RBP16.68■□□□□ 0.26
USP39-208ENST00000455732 SPNS2Q8IVW8 549 aa16.68■□□□□ 0.26
USP39-208ENST00000455732 PALM2Q8IXS6 379 aa16.68■□□□□ 0.26
USP39-208ENST00000455732 OR2A1Q8NGT9 310 aa16.68■□□□□ 0.26
USP39-208ENST00000455732 KIF18AQ8NI77 898 aa16.68■□□□□ 0.26
USP39-208ENST00000455732 EEF1AKMT1Q8WVE0 214 aa16.68■□□□□ 0.26
USP39-208ENST00000455732 SMPDL3AQ92484 453 aa16.68■□□□□ 0.26
USP39-208ENST00000455732 FAM129AQ9BZQ8 928 aa16.68■□□□□ 0.26
USP39-208ENST00000455732 FAM117AQ9C073 453 aa16.68■□□□□ 0.26
USP39-208ENST00000455732 AKIRIN1Q9H9L7 192 aaPredicted RBP16.68■□□□□ 0.26
USP39-208ENST00000455732 ENAMQ9NRM1 1142 aa16.68■□□□□ 0.26
USP39-208ENST00000455732 ZDHHC18Q9NUE0 388 aa16.68■□□□□ 0.26
USP39-208ENST00000455732 PADI1Q9ULC6 663 aa16.68■□□□□ 0.26
USP39-208ENST00000455732 PCDHGA6Q9Y5G7 932 aa16.68■□□□□ 0.26
USP39-208ENST00000455732 MRPS18BQ9Y676 258 aaKnown RBP16.68■□□□□ 0.26
USP39-208ENST00000455732 SETXQ7Z333 2677 aaKnown RBP16.68■□□□□ 0.26
USP39-208ENST00000455732 TCRBV9S1A1TA0A576 114 aa16.67■□□□□ 0.26
USP39-208ENST00000455732 CTAGE15A4D2H0 777 aa16.67■□□□□ 0.26
USP39-208ENST00000455732 TARM1B6A8C7 271 aa16.67■□□□□ 0.26
USP39-208ENST00000455732 C21orf140B9A014 251 aa16.67■□□□□ 0.26
USP39-208ENST00000455732 E7EQ34 232 aa16.67■□□□□ 0.26
USP39-208ENST00000455732 SLC16A5O15375 505 aa16.67■□□□□ 0.26
USP39-208ENST00000455732 TSPAN12O95859 305 aa16.67■□□□□ 0.26
USP39-208ENST00000455732 C1QAP02745 245 aa16.67■□□□□ 0.26
USP39-208ENST00000455732 C8GP07360 202 aa16.67■□□□□ 0.26
USP39-208ENST00000455732 FAM87AP0C7U9 286 aa16.67■□□□□ 0.26
USP39-208ENST00000455732 CTAGE8P0CG41 777 aa16.67■□□□□ 0.26
USP39-208ENST00000455732 CYP2A7P20853 494 aa16.67■□□□□ 0.26
USP39-208ENST00000455732 SSTR1P30872 391 aa16.67■□□□□ 0.26
USP39-208ENST00000455732 RORAP35398 523 aa16.67■□□□□ 0.26
USP39-208ENST00000455732 PNLIPRP1P54315 467 aa16.67■□□□□ 0.26
USP39-208ENST00000455732 CDC20Q12834 499 aa16.67■□□□□ 0.26
USP39-208ENST00000455732 PDAP1Q13442 181 aaKnown RBP16.67■□□□□ 0.26
USP39-208ENST00000455732 FASTKQ14296 549 aaKnown RBP16.67■□□□□ 0.26
USP39-208ENST00000455732 NAA25Q14CX7 972 aa16.67■□□□□ 0.26
USP39-208ENST00000455732 UBE2R2Q712K3 238 aaPredicted RBP16.67■□□□□ 0.26
USP39-208ENST00000455732 CTAGE6Q86UF2 777 aa16.67■□□□□ 0.26
USP39-208ENST00000455732 CTAGE4Q8IX94 777 aa16.67■□□□□ 0.26
USP39-208ENST00000455732 FAM20CQ8IXL6 584 aa16.67■□□□□ 0.26
USP39-208ENST00000455732 GPR135Q8IZ08 494 aa16.67■□□□□ 0.26
USP39-208ENST00000455732 MYO1HQ8N1T3 1032 aa16.67■□□□□ 0.26
USP39-208ENST00000455732 OR2L3Q8NG85 312 aa16.67■□□□□ 0.26
USP39-208ENST00000455732 CDKL2Q92772 493 aa16.67■□□□□ 0.26
USP39-208ENST00000455732 N4BP2L2Q92802 583 aaPredicted RBP16.67■□□□□ 0.26
USP39-208ENST00000455732 ZUFSPQ96AP4 578 aa16.67■□□□□ 0.26
USP39-208ENST00000455732 CATSPER2Q96P56 530 aa16.67■□□□□ 0.26
USP39-208ENST00000455732 OLFM1Q99784 485 aa16.67■□□□□ 0.26
USP39-208ENST00000455732 ARHGAP9Q9BRR9 750 aa16.67■□□□□ 0.26
USP39-208ENST00000455732 RHOJQ9H4E5 214 aa16.67■□□□□ 0.26
USP39-208ENST00000455732 SMYD2Q9NRG4 433 aa16.67■□□□□ 0.26
USP39-208ENST00000455732 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.67■□□□□ 0.26
USP39-208ENST00000455732 PLCL2Q9UPR0 1127 aa16.67■□□□□ 0.26
USP39-208ENST00000455732 ESYT3A0FGR9 886 aa16.66■□□□□ 0.26
USP39-208ENST00000455732 FAM159BA6NKW6 160 aa16.66■□□□□ 0.26
USP39-208ENST00000455732 HCRTR1O43613 425 aa16.66■□□□□ 0.26
USP39-208ENST00000455732 HBQ1P09105 142 aa16.66■□□□□ 0.26
USP39-208ENST00000455732 PSMB5P28074 263 aa16.66■□□□□ 0.26
USP39-208ENST00000455732 GRIA3P42263 894 aa16.66■□□□□ 0.26
USP39-208ENST00000455732 MAGEA4P43358 317 aa16.66■□□□□ 0.26
USP39-208ENST00000455732 GPX6P59796 221 aa16.66■□□□□ 0.26
USP39-208ENST00000455732 IL2P60568 153 aa16.66■□□□□ 0.26
USP39-208ENST00000455732 MC1RQ01726 317 aa16.66■□□□□ 0.26
USP39-208ENST00000455732 GPS2Q13227 327 aa16.66■□□□□ 0.26
USP39-208ENST00000455732 DEFB110Q30KQ9 67 aa16.66■□□□□ 0.26
USP39-208ENST00000455732 GLE1Q53GS7 698 aaKnown RBP16.66■□□□□ 0.26
USP39-208ENST00000455732 FCRL6Q6DN72 434 aa16.66■□□□□ 0.26
USP39-208ENST00000455732 BORAQ6PGQ7 559 aa16.66■□□□□ 0.26
USP39-208ENST00000455732 FIGLAQ6QHK4 219 aa16.66■□□□□ 0.26
USP39-208ENST00000455732 CAPN12Q6ZSI9 719 aa16.66■□□□□ 0.26
USP39-208ENST00000455732 DSELQ8IZU8 1212 aa16.66■□□□□ 0.26
USP39-208ENST00000455732 SLC38A9Q8NBW4 561 aa16.66■□□□□ 0.26
USP39-208ENST00000455732 NOA1Q8NC60 698 aaKnown RBP16.66■□□□□ 0.26
USP39-208ENST00000455732 CT55Q8WUE5 264 aa16.66■□□□□ 0.26
USP39-208ENST00000455732 ZNF480Q8WV37 535 aa16.66■□□□□ 0.26
USP39-208ENST00000455732 DLG3Q92796 817 aa16.66■□□□□ 0.26
USP39-208ENST00000455732 LINGO1Q96FE5 620 aa16.66■□□□□ 0.26
USP39-208ENST00000455732 PDLIM5Q96HC4 596 aaKnown RBP16.66■□□□□ 0.26
USP39-208ENST00000455732 ACTR5Q9H9F9 607 aaPredicted RBP16.66■□□□□ 0.26
USP39-208ENST00000455732 ANKMY1Q9P2S6 941 aa16.66■□□□□ 0.26
USP39-208ENST00000455732 MED13Q9UHV7 2174 aa16.66■□□□□ 0.26
USP39-208ENST00000455732 KCND3Q9UK17 655 aa16.66■□□□□ 0.26
USP39-208ENST00000455732 AP1M2Q9Y6Q5 423 aa16.66■□□□□ 0.26
USP39-208ENST00000455732 ANKRD12Q6UB98 2062 aa16.66■□□□□ 0.26
USP39-208ENST00000455732 HEATR5BQ9P2D3 2071 aa16.66■□□□□ 0.26
USP39-208ENST00000455732 FAM95CA0A1B0GW59 222 aa16.65■□□□□ 0.26
USP39-208ENST00000455732 E7ENX8 843 aa16.65■□□□□ 0.26
USP39-208ENST00000455732 OR2B3O76000 313 aa16.65■□□□□ 0.26
USP39-208ENST00000455732 PRKAR1AP10644 381 aa16.65■□□□□ 0.26
USP39-208ENST00000455732 TCN2P20062 427 aa16.65■□□□□ 0.26
USP39-208ENST00000455732 IMPA1P29218 277 aa16.65■□□□□ 0.26
USP39-208ENST00000455732 GUCY2DQ02846 1103 aa16.65■□□□□ 0.26
USP39-208ENST00000455732 TAP2Q03519 686 aa16.65■□□□□ 0.26
USP39-208ENST00000455732 DNASE1L3Q13609 305 aa16.65■□□□□ 0.26
USP39-208ENST00000455732 PRAMEF17Q5VTA0 474 aa16.65■□□□□ 0.26
USP39-208ENST00000455732 TLDC1Q6P9B6 456 aa16.65■□□□□ 0.26
USP39-208ENST00000455732 C3orf62Q6ZUJ4 267 aa16.65■□□□□ 0.26
USP39-208ENST00000455732 CCDC25Q86WR0 208 aa16.65■□□□□ 0.26
USP39-208ENST00000455732 LRRC56Q8IYG6 542 aaPredicted RBP16.65■□□□□ 0.26
USP39-208ENST00000455732 VPS39Q96JC1 886 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms