RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 ITGA9Q13797 1035 aa11.96□□□□□ -0.49
AC004540.1-204ENST00000449537 OR1C1Q15619 314 aa11.96□□□□□ -0.49
AC004540.1-204ENST00000449537 TCTE1Q5JU00 501 aa11.96□□□□□ -0.49
AC004540.1-204ENST00000449537 SPINK14Q6IE38 97 aa11.96□□□□□ -0.49
AC004540.1-204ENST00000449537 TUBA3EQ6PEY2 450 aa11.96□□□□□ -0.49
AC004540.1-204ENST00000449537 ACAD11Q709F0 780 aa11.96□□□□□ -0.49
AC004540.1-204ENST00000449537 BEST3Q8N1M1 668 aa11.96□□□□□ -0.49
AC004540.1-204ENST00000449537 CIARTQ8N365 385 aaPredicted RBP11.96□□□□□ -0.49
AC004540.1-204ENST00000449537 TTC29Q8NA56 475 aaPredicted RBP11.96□□□□□ -0.49
AC004540.1-204ENST00000449537 HM13Q8TCT9 377 aa11.96□□□□□ -0.49
AC004540.1-204ENST00000449537 NAT14Q8WUY8 206 aa11.96□□□□□ -0.49
AC004540.1-204ENST00000449537 TMEM158Q8WZ71 300 aa11.96□□□□□ -0.49
AC004540.1-204ENST00000449537 SCMH1Q96GD3 660 aa11.96□□□□□ -0.49
AC004540.1-204ENST00000449537 SEC16BQ96JE7 1060 aa11.96□□□□□ -0.49
AC004540.1-204ENST00000449537 ZNF354BQ96LW1 612 aa11.96□□□□□ -0.49
AC004540.1-204ENST00000449537 UTP23Q9BRU9 249 aaKnown RBP11.96□□□□□ -0.49
AC004540.1-204ENST00000449537 HGH1Q9BTY7 390 aa11.96□□□□□ -0.49
AC004540.1-204ENST00000449537 TP63Q9H3D4 680 aaPredicted RBP11.96□□□□□ -0.49
AC004540.1-204ENST00000449537 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.96□□□□□ -0.49
AC004540.1-204ENST00000449537 ICKQ9UPZ9 632 aa11.96□□□□□ -0.49
AC004540.1-204ENST00000449537 SPO11Q9Y5K1 396 aa11.96□□□□□ -0.49
AC004540.1-204ENST00000449537 GLYATL1P3A0A0U1RQE8 302 aa11.95□□□□□ -0.5
AC004540.1-204ENST00000449537 A0A1B0GTH9 108 aa11.95□□□□□ -0.5
AC004540.1-204ENST00000449537 A6NNC1 897 aa11.95□□□□□ -0.5
AC004540.1-204ENST00000449537 ISM1B1AKI9 464 aa11.95□□□□□ -0.5
AC004540.1-204ENST00000449537 SMAD7O15105 426 aaKnown RBP11.95□□□□□ -0.5
AC004540.1-204ENST00000449537 MFSD11O43934 449 aa11.95□□□□□ -0.5
AC004540.1-204ENST00000449537 CRLF1O75462 422 aa11.95□□□□□ -0.5
AC004540.1-204ENST00000449537 SERPING1P05155 500 aa11.95□□□□□ -0.5
AC004540.1-204ENST00000449537 RARAP10276 462 aa11.95□□□□□ -0.5
AC004540.1-204ENST00000449537 ZNF24P17028 368 aa11.95□□□□□ -0.5
AC004540.1-204ENST00000449537 SHMT2P34897 504 aa11.95□□□□□ -0.5
AC004540.1-204ENST00000449537 PCK1P35558 622 aa11.95□□□□□ -0.5
AC004540.1-204ENST00000449537 CD151P48509 253 aa11.95□□□□□ -0.5
AC004540.1-204ENST00000449537 BOP1Q14137 746 aaKnown RBP11.95□□□□□ -0.5
AC004540.1-204ENST00000449537 PCSK7Q16549 785 aa11.95□□□□□ -0.5
AC004540.1-204ENST00000449537 BCL7AQ4VC05 210 aa11.95□□□□□ -0.5
AC004540.1-204ENST00000449537 ACER2Q5QJU3 275 aa11.95□□□□□ -0.5
AC004540.1-204ENST00000449537 ZNF449Q6P9G9 518 aa11.95□□□□□ -0.5
AC004540.1-204ENST00000449537 C16orf47Q6ZP98 133 aaPredicted RBP11.95□□□□□ -0.5
AC004540.1-204ENST00000449537 ARHGEF18Q6ZSZ5 1173 aa11.95□□□□□ -0.5
AC004540.1-204ENST00000449537 GALNTL5Q7Z4T8 443 aa11.95□□□□□ -0.5
AC004540.1-204ENST00000449537 ARMC2Q8NEN0 867 aa11.95□□□□□ -0.5
AC004540.1-204ENST00000449537 FLVCR1-AS1Q8TAF5 88 aa11.95□□□□□ -0.5
AC004540.1-204ENST00000449537 LRRN4Q8WUT4 740 aa11.95□□□□□ -0.5
AC004540.1-204ENST00000449537 TFGQ92734 400 aaPredicted RBP11.95□□□□□ -0.5
AC004540.1-204ENST00000449537 AGPAT1Q99943 283 aa11.95□□□□□ -0.5
AC004540.1-204ENST00000449537 ZNF700Q9H0M5 742 aa11.95□□□□□ -0.5
AC004540.1-204ENST00000449537 PCDH18Q9HCL0 1135 aa11.95□□□□□ -0.5
AC004540.1-204ENST00000449537 ANKRD10Q9NXR5 420 aa11.95□□□□□ -0.5
AC004540.1-204ENST00000449537 GNPTGQ9UJJ9 305 aa11.95□□□□□ -0.5
AC004540.1-204ENST00000449537 RCCD1A6NED2 376 aa11.94□□□□□ -0.5
AC004540.1-204ENST00000449537 SUN1O94901 812 aa11.94□□□□□ -0.5
AC004540.1-204ENST00000449537 NDST3O95803 873 aa11.94□□□□□ -0.5
AC004540.1-204ENST00000449537 SP1P08047 785 aa11.94□□□□□ -0.5
AC004540.1-204ENST00000449537 MSNP26038 577 aaKnown RBP11.94□□□□□ -0.5
AC004540.1-204ENST00000449537 PTGER1P34995 402 aa11.94□□□□□ -0.5
AC004540.1-204ENST00000449537 NUP107P57740 925 aa11.94□□□□□ -0.5
AC004540.1-204ENST00000449537 SNTB1Q13884 538 aaKnown RBP11.94□□□□□ -0.5
AC004540.1-204ENST00000449537 ZC3H12BQ5HYM0 836 aaKnown RBP11.94□□□□□ -0.5
AC004540.1-204ENST00000449537 RNFT1Q5M7Z0 435 aa11.94□□□□□ -0.5
AC004540.1-204ENST00000449537 FBXW10Q5XX13 1052 aa11.94□□□□□ -0.5
AC004540.1-204ENST00000449537 SLC25A25Q6KCM7 469 aa11.94□□□□□ -0.5
AC004540.1-204ENST00000449537 HMBOX1Q6NT76 420 aa11.94□□□□□ -0.5
AC004540.1-204ENST00000449537 PAQR7Q86WK9 346 aa11.94□□□□□ -0.5
AC004540.1-204ENST00000449537 DTWD1Q8N5C7 304 aa11.94□□□□□ -0.5
AC004540.1-204ENST00000449537 HORMAD2Q8N7B1 307 aa11.94□□□□□ -0.5
AC004540.1-204ENST00000449537 AMER2Q8N7J2 671 aa11.94□□□□□ -0.5
AC004540.1-204ENST00000449537 CNTD1Q8N815 330 aa11.94□□□□□ -0.5
AC004540.1-204ENST00000449537 TC2NQ8N9U0 490 aa11.94□□□□□ -0.5
AC004540.1-204ENST00000449537 OR10Q1Q8NGQ4 319 aa11.94□□□□□ -0.5
AC004540.1-204ENST00000449537 ZNF398Q8TD17 642 aa11.94□□□□□ -0.5
AC004540.1-204ENST00000449537 IMMP1LQ96LU5 166 aa11.94□□□□□ -0.5
AC004540.1-204ENST00000449537 TUBB6Q9BUF5 446 aa11.94□□□□□ -0.5
AC004540.1-204ENST00000449537 BDH2Q9BUT1 245 aa11.94□□□□□ -0.5
AC004540.1-204ENST00000449537 TRIM7Q9C029 511 aa11.94□□□□□ -0.5
AC004540.1-204ENST00000449537 OR52A5Q9H2C5 316 aa11.94□□□□□ -0.5
AC004540.1-204ENST00000449537 BEX4Q9NWD9 120 aaPredicted RBP11.94□□□□□ -0.5
AC004540.1-204ENST00000449537 OR6C2Q9NZP2 312 aa11.94□□□□□ -0.5
AC004540.1-204ENST00000449537 CRIM1Q9NZV1 1036 aa11.94□□□□□ -0.5
AC004540.1-204ENST00000449537 IGLV3-12A0A075B6K2 115 aa11.93□□□□□ -0.5
AC004540.1-204ENST00000449537 LOC102723996A0A087X1L8 192 aa11.93□□□□□ -0.5
AC004540.1-204ENST00000449537 F12P00748 615 aaPredicted RBP11.93□□□□□ -0.5
AC004540.1-204ENST00000449537 HEXBP07686 556 aa11.93□□□□□ -0.5
AC004540.1-204ENST00000449537 MAGP20916 626 aa11.93□□□□□ -0.5
AC004540.1-204ENST00000449537 PEX19P40855 299 aa11.93□□□□□ -0.5
AC004540.1-204ENST00000449537 GRIA3P42263 894 aa11.93□□□□□ -0.5
AC004540.1-204ENST00000449537 ARSEP51690 589 aa11.93□□□□□ -0.5
AC004540.1-204ENST00000449537 KLHL30Q0D2K2 578 aa11.93□□□□□ -0.5
AC004540.1-204ENST00000449537 MMRN1Q13201 1228 aa11.93□□□□□ -0.5
AC004540.1-204ENST00000449537 PAFAH1B3Q15102 231 aaKnown RBP11.93□□□□□ -0.5
AC004540.1-204ENST00000449537 PCBP2Q15366 365 aaKnown RBP eCLIP11.93□□□□□ -0.5
AC004540.1-204ENST00000449537 MAPKAPK3Q16644 382 aa11.93□□□□□ -0.5
AC004540.1-204ENST00000449537 FCRLBQ6BAA4 426 aa11.93□□□□□ -0.5
AC004540.1-204ENST00000449537 PRMT9Q6P2P2 845 aa11.93□□□□□ -0.5
AC004540.1-204ENST00000449537 CCDC170Q8IYT3 715 aa11.93□□□□□ -0.5
AC004540.1-204ENST00000449537 TXLNBQ8N3L3 684 aa11.93□□□□□ -0.5
AC004540.1-204ENST00000449537 RPRMLQ8N4K4 120 aa11.93□□□□□ -0.5
AC004540.1-204ENST00000449537 CCNYQ8ND76 341 aa11.93□□□□□ -0.5
AC004540.1-204ENST00000449537 IMP4Q96G21 291 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms