RNA–Protein interactions for RNA: ENST00000449174.1

COPS7B-213, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-213ENST00000449174 ZNF304Q9HCX3 659 aa11.13□□□□□ -0.63
COPS7B-213ENST00000449174 SPATA7Q9P0W8 599 aa11.13□□□□□ -0.63
COPS7B-213ENST00000449174 PAK5Q9P286 719 aa11.13□□□□□ -0.63
COPS7B-213ENST00000449174 ZNF282Q9UDV7 671 aaPredicted RBP11.13□□□□□ -0.63
COPS7B-213ENST00000449174 SLC2A6Q9UGQ3 507 aa11.13□□□□□ -0.63
COPS7B-213ENST00000449174 PACSIN2Q9UNF0 486 aaPredicted RBP11.13□□□□□ -0.63
COPS7B-213ENST00000449174 NTNG1Q9Y2I2 539 aa11.13□□□□□ -0.63
COPS7B-213ENST00000449174 KLHL20Q9Y2M5 609 aa11.13□□□□□ -0.63
COPS7B-213ENST00000449174 SPTBN1Q01082 2364 aaKnown RBP11.12□□□□□ -0.63
COPS7B-213ENST00000449174 NBPF19A0A087WUL8 3843 aa11.12□□□□□ -0.63
COPS7B-213ENST00000449174 A0A1B0GUH1 482 aa11.12□□□□□ -0.63
COPS7B-213ENST00000449174 IQCF5A8MTL0 148 aa11.12□□□□□ -0.63
COPS7B-213ENST00000449174 MAP2K7O14733 419 aa11.12□□□□□ -0.63
COPS7B-213ENST00000449174 PFDN6O15212 129 aa11.12□□□□□ -0.63
COPS7B-213ENST00000449174 CD3EAPO15446 510 aaKnown RBP11.12□□□□□ -0.63
COPS7B-213ENST00000449174 PRPF4O43172 522 aaKnown RBP eCLIP11.12□□□□□ -0.63
COPS7B-213ENST00000449174 PRICKLE3O43900 615 aaPredicted RBP11.12□□□□□ -0.63
COPS7B-213ENST00000449174 USP1O94782 785 aa11.12□□□□□ -0.63
COPS7B-213ENST00000449174 C1orf105O95561 183 aa11.12□□□□□ -0.63
COPS7B-213ENST00000449174 FTCDO95954 541 aa11.12□□□□□ -0.63
COPS7B-213ENST00000449174 IFNB1P01574 187 aa11.12□□□□□ -0.63
COPS7B-213ENST00000449174 APRTP07741 180 aa11.12□□□□□ -0.63
COPS7B-213ENST00000449174 ACPPP15309 386 aa11.12□□□□□ -0.63
COPS7B-213ENST00000449174 ATP5DP30049 168 aa11.12□□□□□ -0.63
COPS7B-213ENST00000449174 ZNF75DP51815 510 aa11.12□□□□□ -0.63
COPS7B-213ENST00000449174 FOXL2P58012 376 aa11.12□□□□□ -0.63
COPS7B-213ENST00000449174 AP2B1P63010 937 aa11.12□□□□□ -0.63
COPS7B-213ENST00000449174 SEMA3AQ14563 771 aa11.12□□□□□ -0.63
COPS7B-213ENST00000449174 MUM1Q2TAK8 710 aa11.12□□□□□ -0.63
COPS7B-213ENST00000449174 FAM180AQ6UWF9 173 aa11.12□□□□□ -0.63
COPS7B-213ENST00000449174 TAX1BP1Q86VP1 789 aa11.12□□□□□ -0.63
COPS7B-213ENST00000449174 RNF10Q8N5U6 811 aaKnown RBP11.12□□□□□ -0.63
COPS7B-213ENST00000449174 CCDC89Q8N998 374 aa11.12□□□□□ -0.63
COPS7B-213ENST00000449174 OR2L3Q8NG85 312 aa11.12□□□□□ -0.63
COPS7B-213ENST00000449174 OR11G2Q8NGC1 345 aa11.12□□□□□ -0.63
COPS7B-213ENST00000449174 LKAAEAR1Q8TD35 194 aa11.12□□□□□ -0.63
COPS7B-213ENST00000449174 SKA2Q8WVK7 121 aaPredicted RBP11.12□□□□□ -0.63
COPS7B-213ENST00000449174 MIEF2Q96C03 454 aa11.12□□□□□ -0.63
COPS7B-213ENST00000449174 MVB12AQ96EY5 273 aa11.12□□□□□ -0.63
COPS7B-213ENST00000449174 THOC3Q96J01 351 aaKnown RBP11.12□□□□□ -0.63
COPS7B-213ENST00000449174 ZNF778Q96MU6 729 aa11.12□□□□□ -0.63
COPS7B-213ENST00000449174 CRB3Q9BUF7 120 aa11.12□□□□□ -0.63
COPS7B-213ENST00000449174 P2RY12Q9H244 342 aa11.12□□□□□ -0.63
COPS7B-213ENST00000449174 EIF2B3Q9NR50 452 aaKnown RBP11.12□□□□□ -0.63
COPS7B-213ENST00000449174 RAB6BQ9NRW1 208 aa11.12□□□□□ -0.63
COPS7B-213ENST00000449174 UTP6Q9NYH9 597 aaKnown RBP11.12□□□□□ -0.63
COPS7B-213ENST00000449174 CTSFQ9UBX1 484 aa11.12□□□□□ -0.63
COPS7B-213ENST00000449174 TTC7AQ9ULT0 858 aaPredicted RBP11.12□□□□□ -0.63
COPS7B-213ENST00000449174 CDC14AQ9UNH5 594 aa11.12□□□□□ -0.63
COPS7B-213ENST00000449174 ZNF148Q9UQR1 794 aa11.12□□□□□ -0.63
COPS7B-213ENST00000449174 PRRC2CQ9Y520 2896 aaKnown RBP11.12□□□□□ -0.63
COPS7B-213ENST00000449174 IGLV3-12A0A075B6K2 115 aa11.11□□□□□ -0.63
COPS7B-213ENST00000449174 TCRBV7S2A1N4TA0A589 114 aa11.11□□□□□ -0.63
COPS7B-213ENST00000449174 H3BMM5 538 aa11.11□□□□□ -0.63
COPS7B-213ENST00000449174 MASP2O00187 686 aa11.11□□□□□ -0.63
COPS7B-213ENST00000449174 E2F3O00716 465 aa11.11□□□□□ -0.63
COPS7B-213ENST00000449174 VPS26AO75436 327 aa11.11□□□□□ -0.63
COPS7B-213ENST00000449174 NDUFS3O75489 264 aa11.11□□□□□ -0.63
COPS7B-213ENST00000449174 ZGLP1P0C6A0 271 aa11.11□□□□□ -0.63
COPS7B-213ENST00000449174 ERVK-10P10266 1014 aa11.11□□□□□ -0.63
COPS7B-213ENST00000449174 MCM3P25205 808 aa11.11□□□□□ -0.63
COPS7B-213ENST00000449174 CMPK1P30085 196 aa11.11□□□□□ -0.63
COPS7B-213ENST00000449174 GRIA1P42261 906 aa11.11□□□□□ -0.63
COPS7B-213ENST00000449174 OR1D4P47884 311 aa11.11□□□□□ -0.63
COPS7B-213ENST00000449174 VSX2P58304 361 aaPredicted RBP11.11□□□□□ -0.63
COPS7B-213ENST00000449174 KLC1Q07866 573 aa11.11□□□□□ -0.63
COPS7B-213ENST00000449174 WASHC2DQ5SRD0 308 aa11.11□□□□□ -0.63
COPS7B-213ENST00000449174 RNF187Q5TA31 235 aaPredicted RBP11.11□□□□□ -0.63
COPS7B-213ENST00000449174 ARMC3Q5W041 872 aa11.11□□□□□ -0.63
COPS7B-213ENST00000449174 RNF44Q7L0R7 432 aa11.11□□□□□ -0.63
COPS7B-213ENST00000449174 PARP9Q8IXQ6 854 aa11.11□□□□□ -0.63
COPS7B-213ENST00000449174 KBTBD2Q8IY47 623 aa11.11□□□□□ -0.63
COPS7B-213ENST00000449174 KRT222Q8N1A0 295 aa11.11□□□□□ -0.63
COPS7B-213ENST00000449174 C2orf73Q8N5S3 287 aaPredicted RBP11.11□□□□□ -0.63
COPS7B-213ENST00000449174 BCORP1Q8N888 145 aa11.11□□□□□ -0.63
COPS7B-213ENST00000449174 STT3BQ8TCJ2 826 aa11.11□□□□□ -0.63
COPS7B-213ENST00000449174 GRHL3Q8TE85 626 aa11.11□□□□□ -0.63
COPS7B-213ENST00000449174 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.11□□□□□ -0.63
COPS7B-213ENST00000449174 ATG4AQ8WYN0 398 aa11.11□□□□□ -0.63
COPS7B-213ENST00000449174 CNDP1Q96KN2 507 aa11.11□□□□□ -0.63
COPS7B-213ENST00000449174 IL17FQ96PD4 163 aa11.11□□□□□ -0.63
COPS7B-213ENST00000449174 ZFYVE21Q9BQ24 234 aa11.11□□□□□ -0.63
COPS7B-213ENST00000449174 SLX1AQ9BQ83 275 aa11.11□□□□□ -0.63
COPS7B-213ENST00000449174 TRIM56Q9BRZ2 755 aaKnown RBP11.11□□□□□ -0.63
COPS7B-213ENST00000449174 IL22Q9GZX6 179 aa11.11□□□□□ -0.63
COPS7B-213ENST00000449174 CHRAC1Q9NRG0 131 aa11.11□□□□□ -0.63
COPS7B-213ENST00000449174 TREX1Q9NSU2 369 aa11.11□□□□□ -0.63
COPS7B-213ENST00000449174 CSAG2Q9Y5P2 127 aa11.11□□□□□ -0.63
COPS7B-213ENST00000449174 CCDC88CQ9P219 2028 aa11.11□□□□□ -0.63
COPS7B-213ENST00000449174 SEC16AO15027 2179 aa11.1□□□□□ -0.63
COPS7B-213ENST00000449174 DOPEY1Q5JWR5 2465 aa11.1□□□□□ -0.63
COPS7B-213ENST00000449174 A0A1W2PQ72 361 aa11.1□□□□□ -0.63
COPS7B-213ENST00000449174 DYTNA2CJ06 578 aa11.1□□□□□ -0.63
COPS7B-213ENST00000449174 LRRTM2O43300 516 aa11.1□□□□□ -0.63
COPS7B-213ENST00000449174 CTSVO60911 334 aa11.1□□□□□ -0.63
COPS7B-213ENST00000449174 ALOX12BO75342 701 aa11.1□□□□□ -0.63
COPS7B-213ENST00000449174 SNRNP200O75643 2136 aaKnown RBP11.1□□□□□ -0.63
COPS7B-213ENST00000449174 STSP08842 583 aa11.1□□□□□ -0.63
COPS7B-213ENST00000449174 COL8A1P27658 744 aa11.1□□□□□ -0.63
COPS7B-213ENST00000449174 HSD17B2P37059 387 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms