RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 LIN28AQ9H9Z2 209 aaKnown RBP7.61□□□□□ -1.19
NEDD9-204ENST00000448183 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.61□□□□□ -1.19
NEDD9-204ENST00000448183 C14orf105Q9NVL8 296 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 NUP50Q9UKX7 468 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 PCDHGB1Q9Y5G3 927 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 KANTRA0A1W2PQU2 76 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 ENTPD6O75354 484 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 HLA-DPB1P04440 258 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 H1F0P07305 194 aaKnown RBP7.61□□□□□ -1.19
NEDD9-204ENST00000448183 PRKCHP24723 683 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 OR3A3P47888 321 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 OR3A2P47893 321 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 HCAR3P49019 387 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 NUDT6P53370 316 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 DSTNP60981 165 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 ABHD18Q0P651 414 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 TLR1Q15399 786 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 TSTQ16762 297 aaKnown RBP7.61□□□□□ -1.19
NEDD9-204ENST00000448183 C6orf183Q5T699 404 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 PRAMEF17Q5VTA0 474 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 EIF5AL1Q6IS14 154 aaKnown RBP7.61□□□□□ -1.19
NEDD9-204ENST00000448183 GALNT12Q8IXK2 581 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 SDR16C5Q8N3Y7 309 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 TMEM199Q8N511 208 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 LCN9Q8WX39 176 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 SMG7Q92540 1137 aaKnown RBP7.61□□□□□ -1.19
NEDD9-204ENST00000448183 BIRC7Q96CA5 298 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 LMLNQ96KR4 655 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 FAM129BQ96TA1 746 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 GAL3ST1Q99999 423 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 WRAP53Q9BUR4 548 aaKnown RBP7.61□□□□□ -1.19
NEDD9-204ENST00000448183 ZNF304Q9HCX3 659 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 MOCS1Q9NZB8 636 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 GALPQ9UBC7 116 aa7.61□□□□□ -1.19
NEDD9-204ENST00000448183 A0A1W2PRQ8 180 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 ISPDA4D126 451 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 C5orf51A6NDU8 294 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 H0YGN5 161 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 HLA-DQB2P05538 268 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 SPATA31D3P0C874 917 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 DDX6P26196 483 aaKnown RBP eCLIP7.6□□□□□ -1.192e-6■■□□□ 11.5
NEDD9-204ENST00000448183 C1QTNF8P60827 252 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 RPL19P84098 196 aaKnown RBP7.6□□□□□ -1.19
NEDD9-204ENST00000448183 SOWAHAQ2M3V2 549 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 SLC2A7Q6PXP3 512 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 MBOAT1Q6ZNC8 495 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 SPATA31D4Q6ZUB0 917 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 TMEM110Q86TL2 294 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 FAM124AQ86V42 546 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 CENPSQ8N2Z9 138 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 LINC00471Q8N535 108 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 INO80EQ8NBZ0 244 aaPredicted RBP7.6□□□□□ -1.19
NEDD9-204ENST00000448183 OR9I1Q8NGQ6 314 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 NKD1Q969G9 470 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 TMEM203Q969S6 136 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 TBX5Q99593 518 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 SLC35A5Q9BS91 424 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 RPF2Q9H7B2 306 aaKnown RBP7.6□□□□□ -1.19
NEDD9-204ENST00000448183 USP29Q9HBJ7 922 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 PRELID1Q9Y255 219 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 NFS1Q9Y697 457 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 NOTOA8MTQ0 251 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 HAS3O00219 553 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 HTRA2O43464 458 aaPredicted RBP7.6□□□□□ -1.19
NEDD9-204ENST00000448183 FAM189A1O60320 539 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 ARL6IP5O75915 188 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 AHSGP02765 367 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 LAG3P18627 525 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 ENTPD1P49961 510 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 AP2S1P53680 142 aaPredicted RBP7.6□□□□□ -1.19
NEDD9-204ENST00000448183 FRG2Q64ET8 278 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 MBLAC2Q68D91 279 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 OR4F3Q6IEY1 312 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 CCSAPQ6IQ19 270 aaPredicted RBP7.6□□□□□ -1.19
NEDD9-204ENST00000448183 IQCHQ86VS3 1027 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 ZNF676Q8N7Q3 588 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 GLIS1Q8NBF1 620 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 ACOT12Q8WYK0 555 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 ZNF516Q92618 1163 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 ZNF599Q96NL3 588 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 FRG2BQ96QU4 278 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 SLC30A2Q9BRI3 323 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 MND1Q9BWT6 205 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 SLC29A3Q9BZD2 475 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 MKKSQ9NPJ1 570 aaPredicted RBP7.6□□□□□ -1.19
NEDD9-204ENST00000448183 TNFRSF10DQ9UBN6 386 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 ERVW-1Q9UQF0 538 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 PTPRJQ12913 1337 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 XPNPEP2O43895 674 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 NFATC1O95644 943 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 PIGRP01833 764 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 OPN1SWP03999 348 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 EPHX1P07099 455 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 TACSTD2P09758 323 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 ACVR2AP27037 513 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 PSMD8P48556 350 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 SMSP52788 366 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 VLDLRP98155 873 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 ADAM15Q13444 863 aa7.6□□□□□ -1.19
NEDD9-204ENST00000448183 MSS51Q4VC12 460 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms