RNA–Protein interactions for RNA: ENST00000446877.5

PMS1-214, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 4

Gene PMS1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-214ENST00000446877 APOA4P06727 396 aa23.29■■□□□ 1.32
PMS1-214ENST00000446877 PPARGP37231 505 aaPredicted RBP23.29■■□□□ 1.32
PMS1-214ENST00000446877 INAQ16352 499 aa23.29■■□□□ 1.32
PMS1-214ENST00000446877 ZXDCQ2QGD7 858 aaPredicted RBP23.29■■□□□ 1.32
PMS1-214ENST00000446877 CCDC38Q502W7 563 aa23.29■■□□□ 1.32
PMS1-214ENST00000446877 PRMT9Q6P2P2 845 aa23.29■■□□□ 1.32
PMS1-214ENST00000446877 GFRALQ6UXV0 394 aa23.29■■□□□ 1.32
PMS1-214ENST00000446877 LINC00523Q86TU6 105 aa23.29■■□□□ 1.32
PMS1-214ENST00000446877 GSDMBQ8TAX9 411 aa23.29■■□□□ 1.32
PMS1-214ENST00000446877 STT3BQ8TCJ2 826 aa23.29■■□□□ 1.32
PMS1-214ENST00000446877 NR4A3Q92570 626 aa23.29■■□□□ 1.32
PMS1-214ENST00000446877 MENTQ9BUN1 341 aa23.29■■□□□ 1.32
PMS1-214ENST00000446877 PTGFRNQ9P2B2 879 aa23.29■■□□□ 1.32
PMS1-214ENST00000446877 TRGV8A0A0C4DH27 118 aa23.28■■□□□ 1.32
PMS1-214ENST00000446877 GOLGA6L9A6NEM1 432 aa23.28■■□□□ 1.32
PMS1-214ENST00000446877 ZGLP1P0C6A0 271 aa23.28■■□□□ 1.32
PMS1-214ENST00000446877 FDXRP22570 491 aa23.28■■□□□ 1.32
PMS1-214ENST00000446877 NAP1L1P55209 391 aaKnown RBP23.28■■□□□ 1.32
PMS1-214ENST00000446877 ZNF324BQ6AW86 544 aaPredicted RBP23.28■■□□□ 1.32
PMS1-214ENST00000446877 AFTPHQ6ULP2 937 aa23.28■■□□□ 1.32
PMS1-214ENST00000446877 TMEM207Q6UWW9 146 aa23.28■■□□□ 1.32
PMS1-214ENST00000446877 NDUFAF7Q7L592 441 aa23.28■■□□□ 1.32
PMS1-214ENST00000446877 VRK3Q8IV63 474 aa23.28■■□□□ 1.32
PMS1-214ENST00000446877 RAB42Q8N4Z0 105 aa23.28■■□□□ 1.32
PMS1-214ENST00000446877 DNAAF3Q8N9W5 541 aa23.28■■□□□ 1.32
PMS1-214ENST00000446877 HDAC10Q969S8 669 aa23.28■■□□□ 1.32
PMS1-214ENST00000446877 C8orf44Q96CB5 159 aa23.28■■□□□ 1.32
PMS1-214ENST00000446877 RAB11FIP5Q9BXF6 653 aa23.28■■□□□ 1.32
PMS1-214ENST00000446877 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP23.28■■□□□ 1.32
PMS1-214ENST00000446877 CHST11Q9NPF2 352 aa23.28■■□□□ 1.32
PMS1-214ENST00000446877 PLA2G3Q9NZ20 509 aa23.28■■□□□ 1.32
PMS1-214ENST00000446877 ZC3H7BQ9UGR2 993 aaKnown RBP23.28■■□□□ 1.32
PMS1-214ENST00000446877 ZGRF1Q86YA3 2104 aa23.27■■□□□ 1.32
PMS1-214ENST00000446877 EIF2S1P05198 315 aaKnown RBP23.27■■□□□ 1.32
PMS1-214ENST00000446877 CXCR2P25025 360 aa23.27■■□□□ 1.32
PMS1-214ENST00000446877 TNFSF10P50591 281 aa23.27■■□□□ 1.32
PMS1-214ENST00000446877 GRB7Q14451 532 aa23.27■■□□□ 1.32
PMS1-214ENST00000446877 ATG9BQ674R7 924 aa23.27■■□□□ 1.32
PMS1-214ENST00000446877 MTFR2Q6P444 385 aa23.27■■□□□ 1.32
PMS1-214ENST00000446877 GDF7Q7Z4P5 450 aa23.27■■□□□ 1.32
PMS1-214ENST00000446877 TAB3Q8N5C8 712 aaPredicted RBP23.27■■□□□ 1.32
PMS1-214ENST00000446877 OR6P1Q8NGX9 317 aa23.27■■□□□ 1.32
PMS1-214ENST00000446877 CALR3Q96L12 384 aaKnown RBP23.27■■□□□ 1.32
PMS1-214ENST00000446877 TAAR6Q96RI8 345 aa23.27■■□□□ 1.32
PMS1-214ENST00000446877 CARD6Q9BX69 1037 aa23.27■■□□□ 1.32
PMS1-214ENST00000446877 PCM1Q15154 2024 aa23.26■■□□□ 1.31
PMS1-214ENST00000446877 CTSVO60911 334 aa23.26■■□□□ 1.31
PMS1-214ENST00000446877 GPC4O75487 556 aa23.26■■□□□ 1.31
PMS1-214ENST00000446877 GOT2P00505 430 aaKnown RBP23.26■■□□□ 1.31
PMS1-214ENST00000446877 PRR35P0CG20 571 aa23.26■■□□□ 1.31
PMS1-214ENST00000446877 GRNP28799 593 aaKnown RBP23.26■■□□□ 1.31
PMS1-214ENST00000446877 PTGER4P35408 488 aa23.26■■□□□ 1.31
PMS1-214ENST00000446877 TDGF1P3P51864 188 aa23.26■■□□□ 1.31
PMS1-214ENST00000446877 TMED2Q15363 201 aa23.26■■□□□ 1.31
PMS1-214ENST00000446877 AADACL2Q6P093 401 aa23.26■■□□□ 1.31
PMS1-214ENST00000446877 MRGPRGQ86SM5 289 aa23.26■■□□□ 1.31
PMS1-214ENST00000446877 DTWD1Q8N5C7 304 aa23.26■■□□□ 1.31
PMS1-214ENST00000446877 OR4L1Q8NH43 312 aa23.26■■□□□ 1.31
PMS1-214ENST00000446877 BRIX1Q8TDN6 353 aaKnown RBP23.26■■□□□ 1.31
PMS1-214ENST00000446877 ITLN2Q8WWU7 325 aaPredicted RBP23.26■■□□□ 1.31
PMS1-214ENST00000446877 HAS2Q92819 552 aa23.26■■□□□ 1.31
PMS1-214ENST00000446877 RAD51AP1Q96B01 352 aa23.26■■□□□ 1.31
PMS1-214ENST00000446877 MESP1Q9BRJ9 268 aa23.26■■□□□ 1.31
PMS1-214ENST00000446877 MRPS2Q9Y399 296 aaKnown RBP23.26■■□□□ 1.31
PMS1-214ENST00000446877 DOCK10Q96BY6 2186 aa23.25■■□□□ 1.31
PMS1-214ENST00000446877 CCL21O00585 134 aa23.25■■□□□ 1.31
PMS1-214ENST00000446877 WFS1O76024 890 aa23.25■■□□□ 1.31
PMS1-214ENST00000446877 UNC5CO95185 931 aa23.25■■□□□ 1.31
PMS1-214ENST00000446877 CRYABP02511 175 aaKnown RBP23.25■■□□□ 1.31
PMS1-214ENST00000446877 SERPINA7P05543 415 aa23.25■■□□□ 1.31
PMS1-214ENST00000446877 ERVK-10P10266 1014 aa23.25■■□□□ 1.31
PMS1-214ENST00000446877 FBLP22087 321 aaKnown RBP23.25■■□□□ 1.31
PMS1-214ENST00000446877 CDH17Q12864 832 aa23.25■■□□□ 1.31
PMS1-214ENST00000446877 MUM1Q2TAK8 710 aa23.25■■□□□ 1.31
PMS1-214ENST00000446877 FASTKD1Q53R41 847 aaKnown RBP23.25■■□□□ 1.31
PMS1-214ENST00000446877 CNSTQ6PJW8 725 aa23.25■■□□□ 1.31
PMS1-214ENST00000446877 CCDC170Q8IYT3 715 aa23.25■■□□□ 1.31
PMS1-214ENST00000446877 OR52K1Q8NGK4 314 aa23.25■■□□□ 1.31
PMS1-214ENST00000446877 OR13J1Q8NGT2 312 aa23.25■■□□□ 1.31
PMS1-214ENST00000446877 SKA2Q8WVK7 121 aaPredicted RBP23.25■■□□□ 1.31
PMS1-214ENST00000446877 MRFAP1L1Q96HT8 127 aa23.25■■□□□ 1.31
PMS1-214ENST00000446877 MIPEPQ99797 713 aa23.25■■□□□ 1.31
PMS1-214ENST00000446877 YIPF2Q9BWQ6 316 aa23.25■■□□□ 1.31
PMS1-214ENST00000446877 CDC14AQ9UNH5 594 aa23.25■■□□□ 1.31
PMS1-214ENST00000446877 A0A0J9YVX5 310 aa23.24■■□□□ 1.31
PMS1-214ENST00000446877 IQCF5A8MTL0 148 aa23.24■■□□□ 1.31
PMS1-214ENST00000446877 SLCO2B1O94956 709 aa23.24■■□□□ 1.31
PMS1-214ENST00000446877 BMP10O95393 424 aa23.24■■□□□ 1.31
PMS1-214ENST00000446877 MYBL2P10244 700 aa23.24■■□□□ 1.31
PMS1-214ENST00000446877 COX6B1P14854 86 aa23.24■■□□□ 1.31
PMS1-214ENST00000446877 HTR1EP28566 365 aa23.24■■□□□ 1.31
PMS1-214ENST00000446877 CYLC1P35663 651 aaPredicted RBP23.24■■□□□ 1.31
PMS1-214ENST00000446877 SOX11P35716 441 aa23.24■■□□□ 1.31
PMS1-214ENST00000446877 EMP2P54851 167 aa23.24■■□□□ 1.31
PMS1-214ENST00000446877 ZNF800Q2TB10 664 aaPredicted RBP eCLIP23.24■■□□□ 1.31
PMS1-214ENST00000446877 VWA2Q5GFL6 755 aa23.24■■□□□ 1.31
PMS1-214ENST00000446877 FRMPD2BQ6IN97 320 aa23.24■■□□□ 1.31
PMS1-214ENST00000446877 ZNF808Q8N4W9 903 aaPredicted RBP23.24■■□□□ 1.31
PMS1-214ENST00000446877 SIRT6Q8N6T7 355 aa23.24■■□□□ 1.31
PMS1-214ENST00000446877 SUN3Q8TAQ9 357 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms