RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 CCDC190Q86UF4 302 aa13.6□□□□□ -0.23
VPS52-212ENST00000445902 FAM217AQ8IXS0 508 aa13.6□□□□□ -0.23
VPS52-212ENST00000445902 NATD1Q8N6N6 113 aa13.6□□□□□ -0.23
VPS52-212ENST00000445902 GLB1L3Q8NCI6 653 aaPredicted RBP13.6□□□□□ -0.23
VPS52-212ENST00000445902 GGHQ92820 318 aa13.6□□□□□ -0.23
VPS52-212ENST00000445902 MAP6Q96JE9 813 aa13.6□□□□□ -0.23
VPS52-212ENST00000445902 RNF170Q96K19 258 aa13.6□□□□□ -0.23
VPS52-212ENST00000445902 MIOSQ9NXC5 875 aa13.6□□□□□ -0.23
VPS52-212ENST00000445902 CCDC59Q9P031 241 aaKnown RBP13.6□□□□□ -0.23
VPS52-212ENST00000445902 TRMT6Q9UJA5 497 aaKnown RBP13.6□□□□□ -0.23
VPS52-212ENST00000445902 ZNF490Q9ULM2 529 aaPredicted RBP13.6□□□□□ -0.23
VPS52-212ENST00000445902 DOCK4Q8N1I0 1966 aa13.6□□□□□ -0.23
VPS52-212ENST00000445902 PTGESO14684 152 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 GPR32O75388 356 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 ITGB1P05556 798 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 DPEP1P16444 411 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 PRKACBP22694 351 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 DNAJA1P31689 397 aaKnown RBP13.59□□□□□ -0.23
VPS52-212ENST00000445902 SOX6P35712 828 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 MAGEA11P43364 429 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 HSPA7P48741 367 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 SNRPD2P62316 118 aaKnown RBP13.59□□□□□ -0.23
VPS52-212ENST00000445902 GTF2H2Q13888 395 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 PTPRRQ15256 657 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 YIF1BQ5BJH7 314 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 PIK3R6Q5UE93 754 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 GTF2H2CQ6P1K8 395 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 DOK6Q6PKX4 331 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 C3orf58Q8NDZ4 430 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 GPR151Q8TDV0 419 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 TPD52L3Q96J77 140 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 ZNF717Q9BY31 904 aaPredicted RBP13.59□□□□□ -0.23
VPS52-212ENST00000445902 EXOSC4Q9NPD3 245 aaKnown RBP13.59□□□□□ -0.23
VPS52-212ENST00000445902 OSER1Q9NX31 292 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 THUMPD1Q9NXG2 353 aaKnown RBP13.59□□□□□ -0.23
VPS52-212ENST00000445902 IPPQ9Y573 584 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 POLR2AP24928 1970 aaKnown RBP13.59□□□□□ -0.23
VPS52-212ENST00000445902 ONECUT3O60422 494 aaPredicted RBP13.59□□□□□ -0.23
VPS52-212ENST00000445902 CNMDO75829 334 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 RGS6P49758 472 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 ZNF280AP59817 542 aaPredicted RBP13.59□□□□□ -0.23
VPS52-212ENST00000445902 MED22Q15528 200 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 PTCHD3Q3KNS1 767 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 PSAPL1Q6NUJ1 521 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 SYCE2Q6PIF2 218 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 BPHLQ86WA6 291 aaPredicted RBP13.59□□□□□ -0.23
VPS52-212ENST00000445902 PIANPQ8IYJ0 282 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 STX19Q8N4C7 294 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 SNAPC3Q92966 411 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 PAAF1Q9BRP4 392 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 C1QTNF3Q9BXJ4 246 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 SLA2Q9H6Q3 261 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 BPIFA1Q9NP55 256 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 PSORS1C1Q9UIG5 152 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 ERVW-1Q9UQF0 538 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 FAM220BPB1ANY3 271 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 FABP3P05413 133 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 COL6A1P12109 1028 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 FPR1P21462 350 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 CBLP22681 906 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 HOXC13P31276 330 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 HNF4AP41235 474 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 IL2P60568 153 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 VGLL4Q14135 290 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 TBCEQ15813 527 aaPredicted RBP13.59□□□□□ -0.23
VPS52-212ENST00000445902 AFMIDQ63HM1 303 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 AGMOQ6ZNB7 445 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 GPR150Q8NGU9 434 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 HASPINQ8TF76 798 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 PIK3R3Q92569 461 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 FCGR1BQ92637 280 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 TRIM63Q969Q1 353 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 OR5M11Q96RB7 305 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 DPH2Q9BQC3 489 aaPredicted RBP13.59□□□□□ -0.23
VPS52-212ENST00000445902 CPPED1Q9BRF8 314 aaPredicted RBP13.59□□□□□ -0.23
VPS52-212ENST00000445902 GABARAPL1Q9H0R8 117 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 NSUN3Q9H649 340 aaKnown RBP13.59□□□□□ -0.23
VPS52-212ENST00000445902 IL1RAPQ9NPH3 570 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 TMLHEQ9NVH6 421 aa13.59□□□□□ -0.23
VPS52-212ENST00000445902 LOC285095A0A1B0GVY8 99 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 OR6C70A6NIJ9 312 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 H3BM21 787 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 PDHXO00330 501 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 IFRD1O00458 451 aaPredicted RBP13.58□□□□□ -0.24
VPS52-212ENST00000445902 KLK8O60259 260 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 YES1P07947 543 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 FHP07954 510 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 KCNE1P15382 129 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 PIK3CBP42338 1070 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 TSTQ16762 297 aaKnown RBP13.58□□□□□ -0.24
VPS52-212ENST00000445902 PARP15Q460N3 678 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 PDE12Q6L8Q7 609 aaKnown RBP13.58□□□□□ -0.24
VPS52-212ENST00000445902 PAMR1Q6UXH9 720 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 NLRP8Q86W28 1048 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 VANGL1Q8TAA9 524 aaPredicted RBP13.58□□□□□ -0.24
VPS52-212ENST00000445902 EXOC2Q96KP1 924 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 REEP1Q9H902 201 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 DNMT3LQ9UJW3 386 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 A0A1W2PQ09 198 aa13.58□□□□□ -0.24
VPS52-212ENST00000445902 A0A1W2PQ72 361 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms