RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 C2orf74A8MZ97 194 aa16.81■□□□□ 0.28
SGCE-206ENST00000445866 ACP1P24666 158 aa16.81■□□□□ 0.28
SGCE-206ENST00000445866 OAS2P29728 719 aaKnown RBP16.81■□□□□ 0.28
SGCE-206ENST00000445866 TBPL1P62380 186 aa16.81■□□□□ 0.28
SGCE-206ENST00000445866 TRIP6Q15654 476 aaKnown RBP16.81■□□□□ 0.28
SGCE-206ENST00000445866 UNC50Q53HI1 259 aa16.81■□□□□ 0.28
SGCE-206ENST00000445866 CCDC157Q569K6 752 aa16.81■□□□□ 0.28
SGCE-206ENST00000445866 RPS27LQ71UM5 84 aaKnown RBP16.81■□□□□ 0.28
SGCE-206ENST00000445866 UBTD2Q8WUN7 234 aa16.81■□□□□ 0.28
SGCE-206ENST00000445866 DYDC1Q8WWB3 177 aa16.81■□□□□ 0.28
SGCE-206ENST00000445866 TMEM237Q96Q45 408 aa16.81■□□□□ 0.28
SGCE-206ENST00000445866 DUX1O43812 170 aa16.81■□□□□ 0.28
SGCE-206ENST00000445866 PRICKLE3O43900 615 aaPredicted RBP16.81■□□□□ 0.28
SGCE-206ENST00000445866 EPB42P16452 691 aa16.81■□□□□ 0.28
SGCE-206ENST00000445866 PRDX3P30048 256 aaKnown RBP16.81■□□□□ 0.28
SGCE-206ENST00000445866 CDH13P55290 713 aa16.81■□□□□ 0.28
SGCE-206ENST00000445866 CHI3L2Q15782 390 aa16.81■□□□□ 0.28
SGCE-206ENST00000445866 IRGCQ6NXR0 463 aa16.81■□□□□ 0.28
SGCE-206ENST00000445866 METTL2BQ6P1Q9 378 aaKnown RBP16.81■□□□□ 0.28
SGCE-206ENST00000445866 LRRC70Q7Z2Q7 622 aa16.81■□□□□ 0.28
SGCE-206ENST00000445866 DEFB124Q8NES8 71 aa16.81■□□□□ 0.28
SGCE-206ENST00000445866 OR2A1Q8NGT9 310 aa16.81■□□□□ 0.28
SGCE-206ENST00000445866 BAHD1Q8TBE0 780 aaPredicted RBP16.81■□□□□ 0.28
SGCE-206ENST00000445866 NETO1Q8TDF5 533 aa16.81■□□□□ 0.28
SGCE-206ENST00000445866 L3HYPDHQ96EM0 354 aa16.81■□□□□ 0.28
SGCE-206ENST00000445866 ZDHHC12Q96GR4 267 aa16.81■□□□□ 0.28
SGCE-206ENST00000445866 OR2A14Q96R47 310 aa16.81■□□□□ 0.28
SGCE-206ENST00000445866 OR4K3Q96R72 315 aa16.81■□□□□ 0.28
SGCE-206ENST00000445866 HAUS8Q9BT25 410 aa16.81■□□□□ 0.28
SGCE-206ENST00000445866 GATA5Q9BWX5 397 aaPredicted RBP16.81■□□□□ 0.28
SGCE-206ENST00000445866 ZMYND15Q9H091 742 aa16.81■□□□□ 0.28
SGCE-206ENST00000445866 LRRN3Q9H3W5 708 aa16.81■□□□□ 0.28
SGCE-206ENST00000445866 SYNDIG1Q9H7V2 258 aa16.81■□□□□ 0.28
SGCE-206ENST00000445866 TAC3Q9UHF0 121 aa16.81■□□□□ 0.28
SGCE-206ENST00000445866 KCNE2Q9Y6J6 123 aa16.81■□□□□ 0.28
SGCE-206ENST00000445866 RIF1Q5UIP0 2472 aaKnown RBP16.8■□□□□ 0.28
SGCE-206ENST00000445866 CASC3O15234 703 aaKnown RBP16.8■□□□□ 0.28
SGCE-206ENST00000445866 CAPN5O15484 640 aaPredicted RBP16.8■□□□□ 0.28
SGCE-206ENST00000445866 RPLP0P05388 317 aaKnown RBP16.8■□□□□ 0.28
SGCE-206ENST00000445866 PSMB5P28074 263 aa16.8■□□□□ 0.28
SGCE-206ENST00000445866 PEBP1P30086 187 aaKnown RBP16.8■□□□□ 0.28
SGCE-206ENST00000445866 CAPZBP47756 277 aa16.8■□□□□ 0.28
SGCE-206ENST00000445866 PRDX1Q06830 199 aaKnown RBP16.8■□□□□ 0.28
SGCE-206ENST00000445866 GTF2H2Q13888 395 aa16.8■□□□□ 0.28
SGCE-206ENST00000445866 PDK4Q16654 411 aa16.8■□□□□ 0.28
SGCE-206ENST00000445866 PRAMEF13Q5VWM6 474 aa16.8■□□□□ 0.28
SGCE-206ENST00000445866 GTF2H2CQ6P1K8 395 aa16.8■□□□□ 0.28
SGCE-206ENST00000445866 ZCCHC23Q6ZST2 131 aa16.8■□□□□ 0.28
SGCE-206ENST00000445866 PLXDC1Q8IUK5 500 aa16.8■□□□□ 0.28
SGCE-206ENST00000445866 FAM20CQ8IXL6 584 aa16.8■□□□□ 0.28
SGCE-206ENST00000445866 KLHDC8AQ8IYD2 350 aa16.8■□□□□ 0.28
SGCE-206ENST00000445866 ATP6V1E2Q96A05 226 aa16.8■□□□□ 0.28
SGCE-206ENST00000445866 NSUN5Q96P11 429 aaKnown RBP16.8■□□□□ 0.28
SGCE-206ENST00000445866 TGM7Q96PF1 710 aa16.8■□□□□ 0.28
SGCE-206ENST00000445866 CAPS2Q9BXY5 557 aa16.8■□□□□ 0.28
SGCE-206ENST00000445866 PCTPQ9UKL6 214 aa16.8■□□□□ 0.28
SGCE-206ENST00000445866 DYRK1BQ9Y463 629 aa16.8■□□□□ 0.28
SGCE-206ENST00000445866 MATN2O00339 956 aa16.79■□□□□ 0.28
SGCE-206ENST00000445866 E2F3O00716 465 aa16.79■□□□□ 0.28
SGCE-206ENST00000445866 GP1BAP07359 652 aa16.79■□□□□ 0.28
SGCE-206ENST00000445866 UGT2B7P16662 529 aa16.79■□□□□ 0.28
SGCE-206ENST00000445866 TSPAN8P19075 237 aa16.79■□□□□ 0.28
SGCE-206ENST00000445866 BGNP21810 368 aa16.79■□□□□ 0.28
SGCE-206ENST00000445866 CFHR1Q03591 330 aa16.79■□□□□ 0.28
SGCE-206ENST00000445866 CDC16Q13042 620 aa16.79■□□□□ 0.28
SGCE-206ENST00000445866 SQSTM1Q13501 440 aa16.79■□□□□ 0.28
SGCE-206ENST00000445866 LCTLQ6UWM7 567 aa16.79■□□□□ 0.28
SGCE-206ENST00000445866 C17orf64Q86WR6 236 aa16.79■□□□□ 0.28
SGCE-206ENST00000445866 TRPC4APQ8TEL6 797 aa16.79■□□□□ 0.28
SGCE-206ENST00000445866 C1QTNF3Q9BXJ4 246 aa16.79■□□□□ 0.28
SGCE-206ENST00000445866 PITPNM3Q9BZ71 974 aa16.79■□□□□ 0.28
SGCE-206ENST00000445866 NOL11Q9H8H0 719 aaKnown RBP16.79■□□□□ 0.28
SGCE-206ENST00000445866 IPPKQ9H8X2 491 aa16.79■□□□□ 0.28
SGCE-206ENST00000445866 EPHA6Q9UF33 1036 aa16.79■□□□□ 0.28
SGCE-206ENST00000445866 A0A1W2PQM1 296 aa16.78■□□□□ 0.28
SGCE-206ENST00000445866 RPS17P08708 135 aaKnown RBP16.78■□□□□ 0.28
SGCE-206ENST00000445866 FGF3P11487 239 aaPredicted RBP16.78■□□□□ 0.28
SGCE-206ENST00000445866 HOXB3P14651 431 aaPredicted RBP16.78■□□□□ 0.28
SGCE-206ENST00000445866 GNAZP19086 355 aa16.78■□□□□ 0.28
SGCE-206ENST00000445866 MPSTP25325 297 aa16.78■□□□□ 0.28
SGCE-206ENST00000445866 CMPK1P30085 196 aa16.78■□□□□ 0.28
SGCE-206ENST00000445866 PIK3CGP48736 1102 aa16.78■□□□□ 0.28
SGCE-206ENST00000445866 ACADVLP49748 655 aa16.78■□□□□ 0.28
SGCE-206ENST00000445866 PPP1CAP62136 330 aa16.78■□□□□ 0.28
SGCE-206ENST00000445866 YBX1P67809 324 aaKnown RBP16.78■□□□□ 0.28
SGCE-206ENST00000445866 ABATP80404 500 aa16.78■□□□□ 0.28
SGCE-206ENST00000445866 CLCQ05315 142 aa16.78■□□□□ 0.28
SGCE-206ENST00000445866 ICE2Q659A1 982 aa16.78■□□□□ 0.28
SGCE-206ENST00000445866 WDR74Q6RFH5 385 aaPredicted RBP16.78■□□□□ 0.28
SGCE-206ENST00000445866 SPESP1Q6UW49 350 aa16.78■□□□□ 0.28
SGCE-206ENST00000445866 FAM92BQ6ZTR7 304 aa16.78■□□□□ 0.28
SGCE-206ENST00000445866 GOLGA7Q7Z5G4 137 aa16.78■□□□□ 0.28
SGCE-206ENST00000445866 TRIM73Q86UV7 250 aa16.78■□□□□ 0.28
SGCE-206ENST00000445866 ZNF483Q8TF39 744 aaPredicted RBP16.78■□□□□ 0.28
SGCE-206ENST00000445866 CNDP1Q96KN2 507 aa16.78■□□□□ 0.28
SGCE-206ENST00000445866 TWSG1Q9GZX9 223 aa16.78■□□□□ 0.28
SGCE-206ENST00000445866 MANSC1Q9H8J5 431 aa16.78■□□□□ 0.28
SGCE-206ENST00000445866 MRPS30Q9NP92 439 aaKnown RBP16.78■□□□□ 0.28
SGCE-206ENST00000445866 SEMA4BQ9NPR2 832 aaPredicted RBP16.78■□□□□ 0.28
SGCE-206ENST00000445866 FAM53CQ9NYF3 392 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms