RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 ZNF501Q96CX3 271 aaPredicted RBP23.07■■□□□ 1.28
C9orf3-207ENST00000445181 MRRFQ96E11 262 aaKnown RBP23.07■■□□□ 1.28
C9orf3-207ENST00000445181 TSPAN17Q96FV3 270 aa23.07■■□□□ 1.28
C9orf3-207ENST00000445181 MCMBPQ9BTE3 642 aa23.07■■□□□ 1.28
C9orf3-207ENST00000445181 CDC42EP4Q9H3Q1 356 aaKnown RBP23.07■■□□□ 1.28
C9orf3-207ENST00000445181 PARVBQ9HBI1 364 aa23.07■■□□□ 1.28
C9orf3-207ENST00000445181 GPAMQ9HCL2 828 aa23.07■■□□□ 1.28
C9orf3-207ENST00000445181 ABCF3Q9NUQ8 709 aa23.07■■□□□ 1.28
C9orf3-207ENST00000445181 PILRAQ9UKJ1 303 aa23.07■■□□□ 1.28
C9orf3-207ENST00000445181 KLHL20Q9Y2M5 609 aa23.07■■□□□ 1.28
C9orf3-207ENST00000445181 PCDHGA4Q9Y5G9 962 aa23.07■■□□□ 1.28
C9orf3-207ENST00000445181 ZNF500O60304 480 aaPredicted RBP23.06■■□□□ 1.28
C9orf3-207ENST00000445181 ACSL3O95573 720 aa23.06■■□□□ 1.28
C9orf3-207ENST00000445181 TSPAN12O95859 305 aa23.06■■□□□ 1.28
C9orf3-207ENST00000445181 HIST1H2AGP0C0S8 130 aaPredicted RBP23.06■■□□□ 1.28
C9orf3-207ENST00000445181 ERGP11308 486 aa23.06■■□□□ 1.28
C9orf3-207ENST00000445181 ZNF37AP17032 561 aaPredicted RBP23.06■■□□□ 1.28
C9orf3-207ENST00000445181 ZNF28P17035 718 aa23.06■■□□□ 1.28
C9orf3-207ENST00000445181 WT1P19544 449 aaPredicted RBP23.06■■□□□ 1.28
C9orf3-207ENST00000445181 HIST1H2ADP20671 130 aa23.06■■□□□ 1.28
C9orf3-207ENST00000445181 PSMB5P28074 263 aa23.06■■□□□ 1.28
C9orf3-207ENST00000445181 ZIC1Q15915 447 aa23.06■■□□□ 1.28
C9orf3-207ENST00000445181 PWWP2BQ6NUJ5 590 aa23.06■■□□□ 1.28
C9orf3-207ENST00000445181 SUSD1Q6UWL2 747 aa23.06■■□□□ 1.28
C9orf3-207ENST00000445181 TMEM126BQ8IUX1 230 aa23.06■■□□□ 1.28
C9orf3-207ENST00000445181 CEP97Q8IW35 865 aa23.06■■□□□ 1.28
C9orf3-207ENST00000445181 HIST1H2AHQ96KK5 128 aa23.06■■□□□ 1.28
C9orf3-207ENST00000445181 CYTH2Q99418 400 aa23.06■■□□□ 1.28
C9orf3-207ENST00000445181 MIPEPQ99797 713 aa23.06■■□□□ 1.28
C9orf3-207ENST00000445181 HIST1H2AJQ99878 128 aa23.06■■□□□ 1.28
C9orf3-207ENST00000445181 H2AFJQ9BTM1 129 aa23.06■■□□□ 1.28
C9orf3-207ENST00000445181 ACAT2Q9BWD1 397 aa23.06■■□□□ 1.28
C9orf3-207ENST00000445181 SLC12A9Q9BXP2 914 aa23.06■■□□□ 1.28
C9orf3-207ENST00000445181 CAB39LQ9H9S4 337 aa23.06■■□□□ 1.28
C9orf3-207ENST00000445181 PDE10AQ9Y233 779 aa23.06■■□□□ 1.28
C9orf3-207ENST00000445181 TMEM184BQ9Y519 407 aaPredicted RBP23.06■■□□□ 1.28
C9orf3-207ENST00000445181 SCRG1O75711 98 aa23.05■■□□□ 1.28
C9orf3-207ENST00000445181 FAM155BO75949 473 aa23.05■■□□□ 1.28
C9orf3-207ENST00000445181 FKBP9O95302 570 aa23.05■■□□□ 1.28
C9orf3-207ENST00000445181 TIAF1O95411 115 aa23.05■■□□□ 1.28
C9orf3-207ENST00000445181 TEX35Q5T0J7 233 aa23.05■■□□□ 1.28
C9orf3-207ENST00000445181 TMEM207Q6UWW9 146 aa23.05■■□□□ 1.28
C9orf3-207ENST00000445181 C6orf15Q6UXA7 325 aaPredicted RBP23.05■■□□□ 1.28
C9orf3-207ENST00000445181 PPFIBP2Q8ND30 876 aa23.05■■□□□ 1.28
C9orf3-207ENST00000445181 ZNF480Q8WV37 535 aa23.05■■□□□ 1.28
C9orf3-207ENST00000445181 DLG3Q92796 817 aa23.05■■□□□ 1.28
C9orf3-207ENST00000445181 CCDC138Q96M89 665 aa23.05■■□□□ 1.28
C9orf3-207ENST00000445181 FCRL4Q96PJ5 515 aa23.05■■□□□ 1.28
C9orf3-207ENST00000445181 TRIM54Q9BYV2 358 aa23.05■■□□□ 1.28
C9orf3-207ENST00000445181 POPDC3Q9HBV1 291 aa23.05■■□□□ 1.28
C9orf3-207ENST00000445181 FAM60AQ9NP50 221 aa23.05■■□□□ 1.28
C9orf3-207ENST00000445181 SERTAD3Q9UJW9 196 aa23.05■■□□□ 1.28
C9orf3-207ENST00000445181 SNRNP200O75643 2136 aaKnown RBP23.05■■□□□ 1.28
C9orf3-207ENST00000445181 FASNP49327 2511 aaKnown RBP23.05■■□□□ 1.28
C9orf3-207ENST00000445181 PRICKLE3O43900 615 aaPredicted RBP23.04■■□□□ 1.28
C9orf3-207ENST00000445181 DLGAP3O95886 979 aa23.04■■□□□ 1.28
C9orf3-207ENST00000445181 STMN1P16949 149 aa23.04■■□□□ 1.28
C9orf3-207ENST00000445181 CMPK1P30085 196 aa23.04■■□□□ 1.28
C9orf3-207ENST00000445181 SLMAPQ14BN4 828 aa23.04■■□□□ 1.28
C9orf3-207ENST00000445181 UAP1Q16222 522 aaPredicted RBP23.04■■□□□ 1.28
C9orf3-207ENST00000445181 DEFB110Q30KQ9 67 aa23.04■■□□□ 1.28
C9orf3-207ENST00000445181 THEMIS2Q5TEJ8 643 aa23.04■■□□□ 1.28
C9orf3-207ENST00000445181 ESX1Q8N693 406 aa23.04■■□□□ 1.28
C9orf3-207ENST00000445181 GALNT6Q8NCL4 622 aa23.04■■□□□ 1.28
C9orf3-207ENST00000445181 OR2L3Q8NG85 312 aa23.04■■□□□ 1.28
C9orf3-207ENST00000445181 OR1L3Q8NH93 324 aa23.04■■□□□ 1.28
C9orf3-207ENST00000445181 PDLIM5Q96HC4 596 aaKnown RBP23.04■■□□□ 1.28
C9orf3-207ENST00000445181 GPR22Q99680 433 aa23.04■■□□□ 1.28
C9orf3-207ENST00000445181 SPRY4Q9C004 299 aa23.04■■□□□ 1.28
C9orf3-207ENST00000445181 SEMA4CQ9C0C4 833 aa23.04■■□□□ 1.28
C9orf3-207ENST00000445181 CHRNA10Q9GZZ6 450 aa23.04■■□□□ 1.28
C9orf3-207ENST00000445181 IRAK4Q9NWZ3 460 aa23.04■■□□□ 1.28
C9orf3-207ENST00000445181 ATMQ13315 3056 aa23.03■■□□□ 1.28
C9orf3-207ENST00000445181 A0A1W2PPV9 198 aa23.03■■□□□ 1.28
C9orf3-207ENST00000445181 ESPNB1AK53 854 aa23.03■■□□□ 1.28
C9orf3-207ENST00000445181 MT-ND3P03897 115 aa23.03■■□□□ 1.28
C9orf3-207ENST00000445181 NTRK1P04629 796 aa23.03■■□□□ 1.28
C9orf3-207ENST00000445181 CCNYL3P0C7X3 344 aa23.03■■□□□ 1.28
C9orf3-207ENST00000445181 MSL3P1P0C860 447 aa23.03■■□□□ 1.28
C9orf3-207ENST00000445181 IMPA1P29218 277 aa23.03■■□□□ 1.28
C9orf3-207ENST00000445181 ITGA1P56199 1179 aa23.03■■□□□ 1.28
C9orf3-207ENST00000445181 PHKG1Q16816 387 aa23.03■■□□□ 1.28
C9orf3-207ENST00000445181 FIGLAQ6QHK4 219 aa23.03■■□□□ 1.28
C9orf3-207ENST00000445181 MBOAT1Q6ZNC8 495 aa23.03■■□□□ 1.28
C9orf3-207ENST00000445181 TIPARPQ7Z3E1 657 aaKnown RBP23.03■■□□□ 1.28
C9orf3-207ENST00000445181 GPR135Q8IZ08 494 aa23.03■■□□□ 1.28
C9orf3-207ENST00000445181 OR2A1Q8NGT9 310 aa23.03■■□□□ 1.28
C9orf3-207ENST00000445181 ZUFSPQ96AP4 578 aa23.03■■□□□ 1.28
C9orf3-207ENST00000445181 MED8Q96G25 268 aa23.03■■□□□ 1.28
C9orf3-207ENST00000445181 SLC7A5P2Q9GIP4 190 aa23.03■■□□□ 1.28
C9orf3-207ENST00000445181 ARL15Q9NXU5 204 aa23.03■■□□□ 1.28
C9orf3-207ENST00000445181 STOX2Q9P2F5 926 aaPredicted RBP23.03■■□□□ 1.28
C9orf3-207ENST00000445181 TAC3Q9UHF0 121 aa23.03■■□□□ 1.28
C9orf3-207ENST00000445181 KALRNO60229 2985 aa23.03■■□□□ 1.28
C9orf3-207ENST00000445181 E7ENX8 843 aa23.02■■□□□ 1.28
C9orf3-207ENST00000445181 PHGDHO43175 533 aaKnown RBP23.02■■□□□ 1.28
C9orf3-207ENST00000445181 CPNE3O75131 537 aaKnown RBP23.02■■□□□ 1.28
C9orf3-207ENST00000445181 CCNDBP1O95273 360 aa23.02■■□□□ 1.28
C9orf3-207ENST00000445181 LIFP15018 202 aa23.02■■□□□ 1.28
C9orf3-207ENST00000445181 GRIA3P42263 894 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms