RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 AMD1P17707 334 aa15.2■□□□□ 0.02
SNX13-204ENST00000444712 KELP23276 732 aa15.2■□□□□ 0.02
SNX13-204ENST00000444712 SOX9P48436 509 aa15.2■□□□□ 0.02
SNX13-204ENST00000444712 GSK3BP49841 420 aa15.2■□□□□ 0.02
SNX13-204ENST00000444712 LIPEQ05469 1076 aa15.2■□□□□ 0.02
SNX13-204ENST00000444712 FAM174BQ3ZCQ3 159 aa15.2■□□□□ 0.02
SNX13-204ENST00000444712 CCSMST1Q4G0I0 132 aa15.2■□□□□ 0.02
SNX13-204ENST00000444712 EP400NLQ6ZTU2 488 aa15.2■□□□□ 0.02
SNX13-204ENST00000444712 C11orf96Q7Z7L8 435 aa15.2■□□□□ 0.02
SNX13-204ENST00000444712 ICA1LQ8NDH6 482 aa15.2■□□□□ 0.02
SNX13-204ENST00000444712 TNIP2Q8NFZ5 429 aa15.2■□□□□ 0.02
SNX13-204ENST00000444712 ZNF480Q8WV37 535 aa15.2■□□□□ 0.02
SNX13-204ENST00000444712 FAM131CQ96AQ9 280 aa15.2■□□□□ 0.02
SNX13-204ENST00000444712 RAD51AP1Q96B01 352 aa15.2■□□□□ 0.02
SNX13-204ENST00000444712 TESCQ96BS2 214 aa15.2■□□□□ 0.02
SNX13-204ENST00000444712 WDR34Q96EX3 536 aa15.2■□□□□ 0.02
SNX13-204ENST00000444712 SLC45A3Q96JT2 553 aa15.2■□□□□ 0.02
SNX13-204ENST00000444712 BTBD9Q96Q07 612 aa15.2■□□□□ 0.02
SNX13-204ENST00000444712 EFCAB11Q9BUY7 163 aa15.2■□□□□ 0.02
SNX13-204ENST00000444712 OSBPL6Q9BZF3 934 aa15.2■□□□□ 0.02
SNX13-204ENST00000444712 OR52A5Q9H2C5 316 aa15.2■□□□□ 0.02
SNX13-204ENST00000444712 WDR26Q9H7D7 661 aa15.2■□□□□ 0.02
SNX13-204ENST00000444712 VPS29Q9UBQ0 182 aa15.2■□□□□ 0.02
SNX13-204ENST00000444712 RUVBL1Q9Y265 456 aaKnown RBP15.2■□□□□ 0.02
SNX13-204ENST00000444712 DTNAQ9Y4J8 743 aa15.2■□□□□ 0.02
SNX13-204ENST00000444712 MYO9BQ13459 2157 aa15.2■□□□□ 0.02
SNX13-204ENST00000444712 COL4A2P08572 1712 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 ZNF839A8K0R7 811 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 PI15O43692 258 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 PRAMEF4O60810 478 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 HSD17B2P37059 387 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 GRIA3P42263 894 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 NEK2P51955 445 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 SEC13P55735 322 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 TBPL1P62380 186 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 DLX2Q07687 328 aaPredicted RBP15.19■□□□□ 0.02
SNX13-204ENST00000444712 KLC1Q07866 573 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 SFSWAPQ12872 951 aaKnown RBP15.19■□□□□ 0.02
SNX13-204ENST00000444712 SGCGQ13326 291 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 LAPTM5Q13571 262 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 NFE2L1Q14494 772 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 PRAMEF9Q5VWM5 478 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 LPCAT4Q643R3 524 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 SUSD1Q6UWL2 747 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 DLEU7Q6UYE1 221 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 CYP2R1Q6VVX0 501 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 DCUN1D3Q8IWE4 304 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 SETD7Q8WTS6 366 aaKnown RBP15.19■□□□□ 0.02
SNX13-204ENST00000444712 OR4K3Q96R72 315 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 SGPP1Q9BX95 441 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 SGK2Q9HBY8 427 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 TRPV5Q9NQA5 729 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 CCDC177Q9NQR7 707 aaPredicted RBP15.19■□□□□ 0.02
SNX13-204ENST00000444712 ARMC1Q9NVT9 282 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 SPATA6Q9NWH7 488 aaPredicted RBP15.19■□□□□ 0.02
SNX13-204ENST00000444712 KRT87PA6NCN2 255 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 PLRG1O43660 514 aaKnown RBP15.19■□□□□ 0.02
SNX13-204ENST00000444712 GPIP06744 558 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 UMPSP11172 480 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 PSMA4P25789 261 aaKnown RBP15.19■□□□□ 0.02
SNX13-204ENST00000444712 CTHP32929 405 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 S100A3P33764 101 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 TRIM23P36406 574 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 HSPA13P48723 471 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 HNRNPFP52597 415 aaKnown RBP15.19■□□□□ 0.02
SNX13-204ENST00000444712 DGKQP52824 942 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 HIST2H2ACQ16777 129 aaPredicted RBP15.19■□□□□ 0.02
SNX13-204ENST00000444712 RABL3Q5HYI8 236 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 HIST2H2AA3Q6FI13 130 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 MED27Q6P2C8 311 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 DOK6Q6PKX4 331 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 GANCQ8TET4 914 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 MSLNLQ96KJ4 702 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 NR1H4Q96RI1 486 aaPredicted RBP15.19■□□□□ 0.02
SNX13-204ENST00000444712 UHRF1Q96T88 793 aaPredicted RBP15.19■□□□□ 0.02
SNX13-204ENST00000444712 ZDHHC5Q9C0B5 715 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 RMI1Q9H9A7 625 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 FBXL12Q9NXK8 326 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 MAGEL2Q9UJ55 1249 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 CNOT11Q9UKZ1 510 aaKnown RBP15.19■□□□□ 0.02
SNX13-204ENST00000444712 ASF1AQ9Y294 204 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 TMEM98Q9Y2Y6 226 aa15.19■□□□□ 0.02
SNX13-204ENST00000444712 ARPC2O15144 300 aa15.18■□□□□ 0.02
SNX13-204ENST00000444712 KCNJ13O60928 360 aa15.18■□□□□ 0.02
SNX13-204ENST00000444712 ERN1O75460 977 aaKnown RBP15.18■□□□□ 0.02
SNX13-204ENST00000444712 CAPNS1P04632 268 aa15.18■□□□□ 0.02
SNX13-204ENST00000444712 CD22P20273 847 aa15.18■□□□□ 0.02
SNX13-204ENST00000444712 PRPS1L1P21108 318 aa15.18■□□□□ 0.02
SNX13-204ENST00000444712 ATP6V1B2P21281 511 aa15.18■□□□□ 0.02
SNX13-204ENST00000444712 IL10P22301 178 aa15.18■□□□□ 0.02
SNX13-204ENST00000444712 PHEXP78562 749 aa15.18■□□□□ 0.02
SNX13-204ENST00000444712 MRPS35P82673 323 aaKnown RBP15.18■□□□□ 0.02
SNX13-204ENST00000444712 ARHGAP19Q14CB8 494 aa15.18■□□□□ 0.02
SNX13-204ENST00000444712 IRF4Q15306 451 aa15.18■□□□□ 0.02
SNX13-204ENST00000444712 FXNQ16595 210 aa15.18■□□□□ 0.02
SNX13-204ENST00000444712 LRRC36Q1X8D7 754 aa15.18■□□□□ 0.02
SNX13-204ENST00000444712 PLA2G4EQ3MJ16 856 aa15.18■□□□□ 0.02
SNX13-204ENST00000444712 SPANXN4Q5MJ08 99 aa15.18■□□□□ 0.02
SNX13-204ENST00000444712 ATG9BQ674R7 924 aa15.18■□□□□ 0.02
SNX13-204ENST00000444712 NOXRED1Q6NXP6 359 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms