RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 STOX2Q9P2F5 926 aaPredicted RBP10.43□□□□□ -0.74
SF3A1-203ENST00000444440 MAD1L1Q9Y6D9 718 aa10.43□□□□□ -0.74
SF3A1-203ENST00000444440 NBPF19A0A087WUL8 3843 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 PRRC2CQ9Y520 2896 aaKnown RBP10.42□□□□□ -0.74
SF3A1-203ENST00000444440 LOC105369274A0A096LPK9 316 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 LOC102723532A0A0G2JNH3 316 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 MKRN2OSH3BPM6 223 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 MYO1CO00159 1063 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 KPNA5O15131 536 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 PFDN6O15212 129 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 TP73O15350 636 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 KDM1AO60341 852 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 CEACAM4O75871 244 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 UMODP07911 640 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 HBQ1P09105 142 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 ERVK-10P10266 1014 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 PAMP19021 973 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 ATP5DP30049 168 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 OTX2P32243 289 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 CSRP3P50461 194 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 DHX9Q08211 1270 aaKnown RBP10.42□□□□□ -0.74
SF3A1-203ENST00000444440 CRYMQ14894 314 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 LONRF1Q17RB8 773 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 HSP90AA5PQ58FG0 334 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 TLDC1Q6P9B6 456 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 TTLL10Q6ZVT0 673 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 ASB18Q6ZVZ8 466 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 PIWIL4Q7Z3Z4 852 aaKnown RBP10.42□□□□□ -0.74
SF3A1-203ENST00000444440 PCGF5Q86SE9 256 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 CREG2Q8IUH2 290 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 OR4N4Q8N0Y3 316 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 FDCSPQ8NFU4 85 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 OR9A1PQ8NGU1 263 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 PROKR1Q8TCW9 393 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 CD200R1Q8TD46 325 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 DLG3Q92796 817 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 SLCO2A1Q92959 643 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 NDNQ99608 321 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 GPR21Q99679 349 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 DPH2Q9BQC3 489 aaPredicted RBP10.42□□□□□ -0.74
SF3A1-203ENST00000444440 TRIM51Q9BSJ1 452 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 NUDT9Q9BW91 350 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 ACAT2Q9BWD1 397 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 RAB11FIP5Q9BXF6 653 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 CLMPQ9H6B4 373 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 MLXIPLQ9NP71 852 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 IARS2Q9NSE4 1012 aaKnown RBP10.42□□□□□ -0.74
SF3A1-203ENST00000444440 SPATA7Q9P0W8 599 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 PCYOX1Q9UHG3 505 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 ANAPC2Q9UJX6 822 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 FBXO5Q9UKT4 447 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 PTRH2Q9Y3E5 179 aaKnown RBP10.42□□□□□ -0.74
SF3A1-203ENST00000444440 KLK4Q9Y5K2 254 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 AP1M2Q9Y6Q5 423 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 FAM169AQ9Y6X4 670 aa10.42□□□□□ -0.74
SF3A1-203ENST00000444440 A0A0J9YVX5 310 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 OR2A25A4D2G3 310 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 A6NL46 340 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 CYSRT1A8MQ03 144 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 C9J4A7 227 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 E5RI56 91 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 H3BMM5 538 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 MAP3K7O43318 606 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 ALOX12BO75342 701 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 SLC16A8O95907 504 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 AGXTP21549 392 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 CCNFP41002 786 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 OR1D4P47884 311 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 MLLT10P55197 1068 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 VSX2P58304 361 aaPredicted RBP10.41□□□□□ -0.74
SF3A1-203ENST00000444440 DCDP81605 110 aaKnown RBP10.41□□□□□ -0.74
SF3A1-203ENST00000444440 KCNC4Q03721 635 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 KLRB1Q12918 225 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 RAPSNQ13702 412 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 THOC5Q13769 683 aaKnown RBP10.41□□□□□ -0.74
SF3A1-203ENST00000444440 NADK2Q4G0N4 442 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 NKAIN1Q4KMZ8 207 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 HP1BP3Q5SSJ5 553 aaPredicted RBP10.41□□□□□ -0.74
SF3A1-203ENST00000444440 RBM20Q5T481 1227 aaKnown RBP10.41□□□□□ -0.74
SF3A1-203ENST00000444440 FBXO42Q6P3S6 717 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 SYDE1Q6ZW31 735 aaPredicted RBP10.41□□□□□ -0.74
SF3A1-203ENST00000444440 RNF44Q7L0R7 432 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 PPP1R32Q7Z5V6 425 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 MRGPREQ86SM8 312 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 KCNMB4Q86W47 210 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 LRRC56Q8IYG6 542 aaPredicted RBP10.41□□□□□ -0.74
SF3A1-203ENST00000444440 CPNE9Q8IYJ1 553 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 SHISA5Q8N114 240 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.41□□□□□ -0.74
SF3A1-203ENST00000444440 GSDMBQ8TAX9 411 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 SEC14L1Q92503 715 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 SLC22A18Q96BI1 424 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 SELENOSQ9BQE4 189 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 AARSD1Q9BTE6 412 aaKnown RBP10.41□□□□□ -0.74
SF3A1-203ENST00000444440 SLC25A23Q9BV35 468 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 ACSS2Q9NR19 701 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 ENAMQ9NRM1 1142 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 IRAK4Q9NWZ3 460 aa10.41□□□□□ -0.74
SF3A1-203ENST00000444440 IFT80Q9P2H3 777 aaPredicted RBP10.41□□□□□ -0.74
SF3A1-203ENST00000444440 CTSFQ9UBX1 484 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms