RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 CCDC106Q9BWC9 280 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 SGPP1Q9BX95 441 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 PRM3Q9NNZ6 103 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 GPR27Q9NS67 375 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 MRGBPQ9NV56 204 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 ARL8BQ9NVJ2 186 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 SNX6Q9UNH7 406 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 COLEC10Q9Y6Z7 277 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 LRP4O75096 1905 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 EML5Q05BV3 1969 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 FANCMQ8IYD8 2048 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 TDRD6O60522 2096 aaKnown RBP9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 CEP192Q8TEP8 1941 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 PCM1Q15154 2024 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 MGRN1O60291 552 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 KDM1AO60341 852 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 PEX11AO75192 247 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 WFS1O76024 890 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 EML2O95834 649 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 ESRRAP11474 423 aaPredicted RBP9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 CALB2P22676 271 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 ZRSR2Q15696 482 aaKnown RBP9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 SNCBQ16143 134 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 ATP6AP1LQ52LC2 224 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 XKR7Q5GH72 579 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 PRAMEF14Q5SWL7 426 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 PRAMEF13Q5VWM6 474 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 LIPJQ5W064 366 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 ABRAXAS1Q6UWZ7 409 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 WASH2PQ6VEQ5 465 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 ARMCX6Q7L4S7 300 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 TMPRSS11BQ86T26 416 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 L3MBTL4Q8NA19 623 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 CXorf40BQ96DE9 158 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 NSL1Q96IY1 281 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 CAMK1GQ96NX5 476 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 RAB11FIP5Q9BXF6 653 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 GSDMCQ9BYG8 508 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 TCEAL2Q9H3H9 227 aaPredicted RBP9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 WASH6PQ9NQA3 447 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 GPRC5BQ9NZH0 403 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 SCHIP1Q9P0W5 487 aaPredicted RBP9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 SPATA7Q9P0W8 599 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 GIMAP2Q9UG22 337 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 PCOLCE2Q9UKZ9 415 aa9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 ZNF490Q9ULM2 529 aaPredicted RBP9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 COPG1Q9Y678 874 aaKnown RBP9.2□□□□□ -0.94
SMPD4P1-203ENST00000443839 GOLGA4Q13439 2230 aaKnown RBP9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 TLR4O00206 839 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 MANBAO00462 879 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 LAMTOR5O43504 91 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 RGS14O43566 566 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 PRAMEF4O60810 478 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 T-ENOLP0DO92 83 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 ERGP11308 486 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 F3P13726 295 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 NPPBP16860 134 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 JUNDP17535 347 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 LBPP18428 481 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 HOXA6P31267 233 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 FNTBP49356 437 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 RASSF2P50749 326 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 RAB28P51157 221 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 STX1BP61266 288 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 DOC2AQ14183 400 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 NR6A1Q15406 480 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 CYP2A13Q16696 494 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 IMPG1Q17R60 797 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 KIF19Q2TAC6 998 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 PRAMEF9Q5VWM5 478 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 CHSY3Q70JA7 882 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 IQCHQ86VS3 1027 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 LRRC56Q8IYG6 542 aaPredicted RBP9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 OR52E1Q8NGJ3 308 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 OR2T11Q8NH01 316 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 SELENOMQ8WWX9 145 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 SMPDL3AQ92484 453 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 MTFMTQ96DP5 389 aaKnown RBP9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 CMTM5Q96DZ9 223 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 NRTNQ99748 197 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 HAUS8Q9BT25 410 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 ACAT2Q9BWD1 397 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 TM9SF3Q9HD45 589 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 FARSBQ9NSD9 589 aaKnown RBP9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 APOBEC3BQ9UH17 382 aaKnown RBP9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 TAGLN3Q9UI15 199 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 KLF15Q9UIH9 416 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 THADAQ6YHU6 1953 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 TRBV23OR9-2A0A075B6M9 112 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 KCNE1BA0A087WTH5 132 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 CCDC163A0A0D9SF12 145 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 HNRNPCL1O60812 293 aaKnown RBP9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 WNT1P04628 370 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 JUPP14923 745 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 EZRP15311 586 aaKnown RBP9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 NDUFS1P28331 727 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 HNF4AP41235 474 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 NCALDP61601 193 aa9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 ELF3P78545 371 aaPredicted RBP9.19□□□□□ -0.94
SMPD4P1-203ENST00000443839 KLF10Q13118 480 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms