RNA–Protein interactions for RNA: ENST00000442830.5

PTPRE-203, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-203ENST00000442830 RNF187Q5TA31 235 aaPredicted RBP13.22□□□□□ -0.29
PTPRE-203ENST00000442830 ISLR2Q6UXK2 745 aa13.22□□□□□ -0.29
PTPRE-203ENST00000442830 OTOAQ7RTW8 1153 aa13.22□□□□□ -0.29
PTPRE-203ENST00000442830 RNF10Q8N5U6 811 aaKnown RBP13.22□□□□□ -0.29
PTPRE-203ENST00000442830 CFAP61Q8NHU2 1237 aa13.22□□□□□ -0.29
PTPRE-203ENST00000442830 DNAJB14Q8TBM8 379 aa13.22□□□□□ -0.29
PTPRE-203ENST00000442830 MVB12AQ96EY5 273 aa13.22□□□□□ -0.29
PTPRE-203ENST00000442830 BAG1Q99933 345 aaPredicted RBP13.22□□□□□ -0.29
PTPRE-203ENST00000442830 IL22Q9GZX6 179 aa13.22□□□□□ -0.29
PTPRE-203ENST00000442830 ETNK1Q9HBU6 452 aa13.22□□□□□ -0.29
PTPRE-203ENST00000442830 EIF2B3Q9NR50 452 aaKnown RBP13.22□□□□□ -0.29
PTPRE-203ENST00000442830 SLC22A11Q9NSA0 550 aa13.22□□□□□ -0.29
PTPRE-203ENST00000442830 ZNF282Q9UDV7 671 aaPredicted RBP13.22□□□□□ -0.29
PTPRE-203ENST00000442830 CDC14AQ9UNH5 594 aa13.22□□□□□ -0.29
PTPRE-203ENST00000442830 ZNF148Q9UQR1 794 aa13.22□□□□□ -0.29
PTPRE-203ENST00000442830 REXO2Q9Y3B8 237 aaKnown RBP13.22□□□□□ -0.29
PTPRE-203ENST00000442830 HS3ST3B1Q9Y662 390 aa13.22□□□□□ -0.29
PTPRE-203ENST00000442830 HEATR5BQ9P2D3 2071 aa13.22□□□□□ -0.29
PTPRE-203ENST00000442830 CRYBG3Q68DQ2 2970 aa13.21□□□□□ -0.29
PTPRE-203ENST00000442830 A0A1B0GUH1 482 aa13.21□□□□□ -0.29
PTPRE-203ENST00000442830 VSTM2BA6NLU5 285 aa13.21□□□□□ -0.29
PTPRE-203ENST00000442830 ZNF839A8K0R7 811 aa13.21□□□□□ -0.29
PTPRE-203ENST00000442830 MAP2K7O14733 419 aa13.21□□□□□ -0.29
PTPRE-203ENST00000442830 VPS26AO75436 327 aa13.21□□□□□ -0.29
PTPRE-203ENST00000442830 IFNB1P01574 187 aa13.21□□□□□ -0.29
PTPRE-203ENST00000442830 APRTP07741 180 aa13.21□□□□□ -0.29
PTPRE-203ENST00000442830 MYBL2P10244 700 aa13.21□□□□□ -0.29
PTPRE-203ENST00000442830 ACPPP15309 386 aa13.21□□□□□ -0.29
PTPRE-203ENST00000442830 ATP5DP30049 168 aa13.21□□□□□ -0.29
PTPRE-203ENST00000442830 DCTP40126 519 aa13.21□□□□□ -0.29
PTPRE-203ENST00000442830 ZNF75DP51815 510 aa13.21□□□□□ -0.29
PTPRE-203ENST00000442830 CDC16Q13042 620 aa13.21□□□□□ -0.29
PTPRE-203ENST00000442830 FAM180AQ6UWF9 173 aa13.21□□□□□ -0.29
PTPRE-203ENST00000442830 KIRREL2Q6UWL6 708 aa13.21□□□□□ -0.29
PTPRE-203ENST00000442830 RAD9BQ6WBX8 426 aa13.21□□□□□ -0.29
PTPRE-203ENST00000442830 NAPRTQ6XQN6 538 aa13.21□□□□□ -0.29
PTPRE-203ENST00000442830 ZNF534Q76KX8 674 aa13.21□□□□□ -0.29
PTPRE-203ENST00000442830 COX15Q7KZN9 410 aa13.21□□□□□ -0.29
PTPRE-203ENST00000442830 KCNMB4Q86W47 210 aa13.21□□□□□ -0.29
PTPRE-203ENST00000442830 BCORP1Q8N888 145 aa13.21□□□□□ -0.29
PTPRE-203ENST00000442830 ACRBPQ8NEB7 543 aa13.21□□□□□ -0.29
PTPRE-203ENST00000442830 FAR1Q8WVX9 515 aa13.21□□□□□ -0.29
PTPRE-203ENST00000442830 INPP5DQ92835 1189 aa13.21□□□□□ -0.29
PTPRE-203ENST00000442830 MIEF2Q96C03 454 aa13.21□□□□□ -0.29
PTPRE-203ENST00000442830 CRB3Q9BUF7 120 aa13.21□□□□□ -0.29
PTPRE-203ENST00000442830 TSGA10Q9BZW7 698 aa13.21□□□□□ -0.29
PTPRE-203ENST00000442830 RUBCNLQ9H714 662 aa13.21□□□□□ -0.29
PTPRE-203ENST00000442830 ZNF304Q9HCX3 659 aa13.21□□□□□ -0.29
PTPRE-203ENST00000442830 RAB6BQ9NRW1 208 aa13.21□□□□□ -0.29
PTPRE-203ENST00000442830 C14orf105Q9NVL8 296 aa13.21□□□□□ -0.29
PTPRE-203ENST00000442830 SLC2A6Q9UGQ3 507 aa13.21□□□□□ -0.29
PTPRE-203ENST00000442830 R3HDM2Q9Y2K5 976 aaKnown RBP13.21□□□□□ -0.29
PTPRE-203ENST00000442830 DYTNA2CJ06 578 aa13.2□□□□□ -0.3
PTPRE-203ENST00000442830 TXNDC9O14530 226 aa13.2□□□□□ -0.3
PTPRE-203ENST00000442830 CD3EAPO15446 510 aaKnown RBP13.2□□□□□ -0.3
PTPRE-203ENST00000442830 PRICKLE3O43900 615 aaPredicted RBP13.2□□□□□ -0.3
PTPRE-203ENST00000442830 NDUFS3O75489 264 aa13.2□□□□□ -0.3
PTPRE-203ENST00000442830 CCNDBP1O95273 360 aa13.2□□□□□ -0.3
PTPRE-203ENST00000442830 CLDN1O95832 211 aa13.2□□□□□ -0.3
PTPRE-203ENST00000442830 FTCDO95954 541 aa13.2□□□□□ -0.3
PTPRE-203ENST00000442830 RNF224P0DH78 156 aa13.2□□□□□ -0.3
PTPRE-203ENST00000442830 CMPK1P30085 196 aa13.2□□□□□ -0.3
PTPRE-203ENST00000442830 HSD17B2P37059 387 aa13.2□□□□□ -0.3
PTPRE-203ENST00000442830 GRIA3P42263 894 aa13.2□□□□□ -0.3
PTPRE-203ENST00000442830 VSX2P58304 361 aaPredicted RBP13.2□□□□□ -0.3
PTPRE-203ENST00000442830 MFAP5Q13361 173 aa13.2□□□□□ -0.3
PTPRE-203ENST00000442830 GRB7Q14451 532 aa13.2□□□□□ -0.3
PTPRE-203ENST00000442830 HIST2H2BCQ6DN03 193 aa13.2□□□□□ -0.3
PTPRE-203ENST00000442830 MRNIPQ6NTE8 343 aa13.2□□□□□ -0.3
PTPRE-203ENST00000442830 RNF44Q7L0R7 432 aa13.2□□□□□ -0.3
PTPRE-203ENST00000442830 SDCCAG8Q86SQ7 713 aaPredicted RBP13.2□□□□□ -0.3
PTPRE-203ENST00000442830 TICAM1Q8IUC6 712 aa13.2□□□□□ -0.3
PTPRE-203ENST00000442830 VRK3Q8IV63 474 aa13.2□□□□□ -0.3
PTPRE-203ENST00000442830 KBTBD2Q8IY47 623 aa13.2□□□□□ -0.3
PTPRE-203ENST00000442830 OR11G2Q8NGC1 345 aa13.2□□□□□ -0.3
PTPRE-203ENST00000442830 SKA2Q8WVK7 121 aaPredicted RBP13.2□□□□□ -0.3
PTPRE-203ENST00000442830 MAIP1Q8WWC4 291 aa13.2□□□□□ -0.3
PTPRE-203ENST00000442830 THOC3Q96J01 351 aaKnown RBP13.2□□□□□ -0.3
PTPRE-203ENST00000442830 TCF12Q99081 682 aa13.2□□□□□ -0.3
PTPRE-203ENST00000442830 ZFYVE21Q9BQ24 234 aa13.2□□□□□ -0.3
PTPRE-203ENST00000442830 FAM114A2Q9NRY5 505 aa13.2□□□□□ -0.3
PTPRE-203ENST00000442830 BFARQ9NZS9 450 aa13.2□□□□□ -0.3
PTPRE-203ENST00000442830 PACSIN2Q9UNF0 486 aaPredicted RBP13.2□□□□□ -0.3
PTPRE-203ENST00000442830 DRG1Q9Y295 367 aaKnown RBP13.2□□□□□ -0.3
PTPRE-203ENST00000442830 VPS9D1Q9Y2B5 631 aa13.2□□□□□ -0.3
PTPRE-203ENST00000442830 ZKSCAN5Q9Y2L8 839 aa13.2□□□□□ -0.3
PTPRE-203ENST00000442830 HYKKA2RU49 373 aa13.19□□□□□ -0.3
PTPRE-203ENST00000442830 C1orf105O95561 183 aa13.19□□□□□ -0.3
PTPRE-203ENST00000442830 CTSBP07858 339 aa13.19□□□□□ -0.3
PTPRE-203ENST00000442830 PKMP14618 531 aaKnown RBP13.19□□□□□ -0.3
PTPRE-203ENST00000442830 FBLP22087 321 aaKnown RBP13.19□□□□□ -0.3
PTPRE-203ENST00000442830 CXCR2P25025 360 aa13.19□□□□□ -0.3
PTPRE-203ENST00000442830 NPY2RP49146 381 aa13.19□□□□□ -0.3
PTPRE-203ENST00000442830 ADARP55265 1226 aaKnown RBP13.19□□□□□ -0.3
PTPRE-203ENST00000442830 CDK16Q00536 496 aa13.19□□□□□ -0.3
PTPRE-203ENST00000442830 ARHGAP19Q14CB8 494 aa13.19□□□□□ -0.3
PTPRE-203ENST00000442830 HIF1AQ16665 826 aa13.19□□□□□ -0.3
PTPRE-203ENST00000442830 WASHC2DQ5SRD0 308 aa13.19□□□□□ -0.3
PTPRE-203ENST00000442830 GARNL3Q5VVW2 1013 aa13.19□□□□□ -0.3
PTPRE-203ENST00000442830 RIPOR1Q6ZS17 1223 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms