RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 MRPS21P82921 87 aaKnown RBP12.77□□□□□ -0.37
CPSF4-206ENST00000441580 LAPTM5Q13571 262 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 DOC2AQ14183 400 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 NFE2L1Q14494 772 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 PTGR1Q14914 329 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 KIAA0040Q15053 153 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 TMEM259Q4ZIN3 620 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 PAGE3Q5JUK9 113 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 HABP4Q5JVS0 413 aaKnown RBP12.77□□□□□ -0.37
CPSF4-206ENST00000441580 DOK6Q6PKX4 331 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 SLC2A7Q6PXP3 512 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 XKR5Q6UX68 686 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 EP400NLQ6ZTU2 488 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 TMPRSS11BQ86T26 416 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 PTRH1Q86Y79 214 aaKnown RBP12.77□□□□□ -0.37
CPSF4-206ENST00000441580 HID1Q8IV36 788 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 RAB42Q8N4Z0 105 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 TP53I13Q8NBR0 393 aaPredicted RBP12.77□□□□□ -0.37
CPSF4-206ENST00000441580 PLA2G15Q8NCC3 412 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 FAM156AQ8NDB6 213 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 TNIP2Q8NFZ5 429 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 WDR20Q8TBZ3 569 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 GANCQ8TET4 914 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 ZNF480Q8WV37 535 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 ASB12Q8WXK4 309 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 UBE2E3Q969T4 207 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 RAD51AP1Q96B01 352 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 SH3GL1Q99961 368 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 HAUS8Q9BT25 410 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 RPP25Q9BUL9 199 aaKnown RBP12.77□□□□□ -0.37
CPSF4-206ENST00000441580 SPATA6Q9NWH7 488 aaPredicted RBP12.77□□□□□ -0.37
CPSF4-206ENST00000441580 CMTM6Q9NX76 183 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 ACTR3BQ9P1U1 418 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 SERGEFQ9UGK8 458 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 MAGEL2Q9UJ55 1249 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 CD207Q9UJ71 328 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 RIMS3Q9UJD0 308 aa12.77□□□□□ -0.37
CPSF4-206ENST00000441580 RUVBL1Q9Y265 456 aaKnown RBP12.77□□□□□ -0.37
CPSF4-206ENST00000441580 KANSL1LA0AUZ9 987 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 ARPC2O15144 300 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 GPIP06744 558 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 C7P10643 843 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 ERGP11308 486 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 FCGR1AP12314 374 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 AMD1P17707 334 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 SDC1P18827 310 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 CD22P20273 847 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 ATP6V1B2P21281 511 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 PSMA4P25789 261 aaKnown RBP12.76□□□□□ -0.37
CPSF4-206ENST00000441580 PEX2P28328 305 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 HTR1EP28566 365 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 HSPA13P48723 471 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 GSK3BP49841 420 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 ADPRHP54922 357 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 GRSF1Q12849 480 aaKnown RBP eCLIP12.76□□□□□ -0.37
CPSF4-206ENST00000441580 SGCGQ13326 291 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 FXNQ16595 210 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 FAM174BQ3ZCQ3 159 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 CCSMST1Q4G0I0 132 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 SPIN4Q56A73 249 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 C2orf27AQ580R0 203 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 MTX3Q5HYI7 312 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 TMEM196Q5HYL7 178 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 PRAMEF14Q5SWL7 426 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 PRAMEF13Q5VWM6 474 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 ATG9BQ674R7 924 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 MED27Q6P2C8 311 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 SUSD1Q6UWL2 747 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 LCTLQ6UWM7 567 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 USP30Q70CQ3 517 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 KIAA2013Q8IYS2 634 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 PLCD3Q8N3E9 789 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 DENND6BQ8NEG7 585 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 ADCY4Q8NFM4 1077 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 EZH1Q92800 747 aaPredicted RBP12.76□□□□□ -0.37
CPSF4-206ENST00000441580 NELL1Q92832 810 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 OR4K3Q96R72 315 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 CGREF1Q99674 301 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 RAB11FIP5Q9BXF6 653 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 C1QTNF2Q9BXJ5 285 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 OSBPL6Q9BZF3 934 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 ZDHHC5Q9C0B5 715 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 SGK2Q9HBY8 427 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 INTS7Q9NVH2 962 aaKnown RBP12.76□□□□□ -0.37
CPSF4-206ENST00000441580 FBXL12Q9NXK8 326 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 ZNHIT2Q9UHR6 403 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 ACSL5Q9ULC5 683 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 ASF1AQ9Y294 204 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 MAN2B2Q9Y2E5 1009 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 TSC22D4Q9Y3Q8 395 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 DTNAQ9Y4J8 743 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 PIAS3Q9Y6X2 628 aa12.76□□□□□ -0.37
CPSF4-206ENST00000441580 KRT87PA6NCN2 255 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 CCDC85CA6NKD9 419 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 PI15O43692 258 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 PRAMEF4O60810 478 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 ERN1O75460 977 aaKnown RBP12.75□□□□□ -0.37
CPSF4-206ENST00000441580 KLF8O95600 359 aaPredicted RBP12.75□□□□□ -0.37
CPSF4-206ENST00000441580 PGRP06401 933 aa12.75□□□□□ -0.37
CPSF4-206ENST00000441580 PRPS1L1P21108 318 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms