RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 CRISPLD1Q9H336 500 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 PRDM5Q9NQX1 630 aaPredicted RBP11.6□□□□□ -0.55
LTBR-203ENST00000441074 VNN3Q9NY84 501 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.6□□□□□ -0.55
LTBR-203ENST00000441074 PATJQ8NI35 1801 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 E9PAM4 449 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 SSX4O60224 188 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 KLK8O60259 260 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 SEC22BO75396 215 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 TRAPPC2P0DI81 140 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 TRAPPC2BP0DI82 140 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 PLIN5Q00G26 463 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 PROX2Q3B8N5 592 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 SPANXN2Q5MJ10 180 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 NXNL2Q5VZ03 156 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 PRSS55Q6UWB4 352 aaPredicted RBP11.6□□□□□ -0.55
LTBR-203ENST00000441074 AHSA2Q719I0 299 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 SLC46A3Q7Z3Q1 461 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 SPATA2LQ8IUW3 424 aaPredicted RBP11.6□□□□□ -0.55
LTBR-203ENST00000441074 TTC29Q8NA56 475 aaPredicted RBP11.6□□□□□ -0.55
LTBR-203ENST00000441074 ANKK1Q8NFD2 765 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 PYURFQ96I23 114 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 EGLN2Q96KS0 407 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 TMEM39AQ9NV64 488 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 MARCH5Q9NX47 278 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 GALPQ9UBC7 116 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 HECAQ9UBI9 543 aaPredicted RBP11.6□□□□□ -0.55
LTBR-203ENST00000441074 AGO1Q9UL18 857 aaKnown RBP11.6□□□□□ -0.55
LTBR-203ENST00000441074 BTBD3Q9Y2F9 522 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 LYVE1Q9Y5Y7 322 aa11.6□□□□□ -0.55
LTBR-203ENST00000441074 TNRC18O15417 2968 aaPredicted RBP11.6□□□□□ -0.55
LTBR-203ENST00000441074 LCHNA4D1U4 455 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 CD3EAPO15446 510 aaKnown RBP11.59□□□□□ -0.55
LTBR-203ENST00000441074 ICMTO60725 284 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 OR4F21O95013 312 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 PEX11BO96011 259 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 RPLP0P05388 317 aaKnown RBP11.59□□□□□ -0.55
LTBR-203ENST00000441074 CLTBP09497 229 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 RRM2P31350 389 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 MAGEA2P43356 314 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 SLC15A1P46059 708 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 AGTR2P50052 363 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 ACVR1Q04771 509 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 TSNQ15631 228 aaKnown RBP11.59□□□□□ -0.55
LTBR-203ENST00000441074 YIF1BQ5BJH7 314 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 CEP78Q5JTW2 689 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 PRSS36Q5K4E3 855 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 ARTNQ5T4W7 220 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 MRNIPQ6NTE8 343 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 CCDC190Q86UF4 302 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 HORMAD1Q86X24 394 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 C7orf61Q8IZ16 206 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 CRIPAKQ8N1N5 446 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 THEM5Q8N1Q8 247 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 UMODL1-AS1Q8N2C9 162 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 SPERTQ8NA61 448 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 SETD6Q8TBK2 473 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 NUDT8Q8WV74 236 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 SLC13A3Q8WWT9 602 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 TTC9Q92623 222 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 GTF2H4Q92759 462 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 BHMTQ93088 406 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 NCLNQ969V3 563 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 C1orf74Q96LT6 269 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 TBATAQ96M53 351 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 SDHCQ99643 169 aaPredicted RBP11.59□□□□□ -0.55
LTBR-203ENST00000441074 TBCDQ9BTW9 1192 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 HTATIP2Q9BUP3 242 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 IRF2BPLQ9H1B7 796 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 IKZF5Q9H5V7 419 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 ZFP14Q9HCL3 533 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 TAS2R9Q9NYW1 312 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 IKZF3Q9UKT9 509 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 SNX6Q9UNH7 406 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 BOLA1Q9Y3E2 137 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 TTC3P53804 2025 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 HMX3A6NHT5 357 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 PITPNM1O00562 1244 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 ADAM12O43184 909 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 LDB2O43679 373 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 WBP4O75554 376 aaKnown RBP11.59□□□□□ -0.55
LTBR-203ENST00000441074 FKBP9O95302 570 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 SERPINA1P01009 418 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 ITGB6P18564 788 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 OGNP20774 298 aaKnown RBP11.59□□□□□ -0.55
LTBR-203ENST00000441074 CD86P42081 329 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 ARHGDIAP52565 204 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 IL1RL1Q01638 556 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 CTXN3Q4LDR2 81 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 BCL7AQ4VC05 210 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 RUNDC3AQ59EK9 446 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 CARD16Q5EG05 197 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 MARC1Q5VT66 337 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 NEK5Q6P3R8 708 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 PAQR3Q6TCH7 311 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.59□□□□□ -0.55
LTBR-203ENST00000441074 CDYL2Q8N8U2 506 aa11.59□□□□□ -0.55
LTBR-203ENST00000441074 JPH3Q8WXH2 748 aaPredicted RBP11.59□□□□□ -0.55
LTBR-203ENST00000441074 FUBP1Q96AE4 644 aaKnown RBP11.59□□□□□ -0.55
LTBR-203ENST00000441074 TMCO6Q96DC7 493 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms