RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 SLC30A3Q99726 388 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 SPRTNQ9H040 489 aaPredicted RBP10.07□□□□□ -0.8
MCF2L-216ENST00000439475 CHST8Q9H2A9 424 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 ADNPQ9H2P0 1102 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 MRPS30Q9NP92 439 aaKnown RBP10.07□□□□□ -0.8
MCF2L-216ENST00000439475 SAYSD1Q9NPB0 183 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 PCMTD2Q9NV79 361 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 EURLQ9NYK6 297 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 MOCS1Q9NZB8 636 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 ANKMY1Q9P2S6 941 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 GPN3Q9UHW5 284 aaPredicted RBP10.07□□□□□ -0.8
MCF2L-216ENST00000439475 POLHQ9Y253 713 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 PADI2Q9Y2J8 665 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 MED16Q9Y2X0 877 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 SPTBP11277 2137 aa10.07□□□□□ -0.8
MCF2L-216ENST00000439475 ANKRD11Q6UB99 2663 aaPredicted RBP10.06□□□□□ -0.8
MCF2L-216ENST00000439475 FRYQ5TBA9 3013 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 ZSCAN9O15535 394 aaPredicted RBP10.06□□□□□ -0.8
MCF2L-216ENST00000439475 PRKAR1AP10644 381 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 ERGP11308 486 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 ALAS2P22557 587 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 F8A1P23610 371 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 HRH2P25021 359 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 GABRB3P28472 473 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 RORAP35398 523 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 GRIA3P42263 894 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 GABRA4P48169 554 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 ABATP80404 500 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 DCDP81605 110 aaKnown RBP10.06□□□□□ -0.8
MCF2L-216ENST00000439475 PRDX1Q06830 199 aaKnown RBP10.06□□□□□ -0.8
MCF2L-216ENST00000439475 SP140Q13342 867 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 FASTKQ14296 549 aaKnown RBP10.06□□□□□ -0.8
MCF2L-216ENST00000439475 GRM7Q14831 915 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 ZIC1Q15915 447 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 DEFB110Q30KQ9 67 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 DEFB109BQ30KR1 87 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 LINC00303Q3SY05 128 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.06□□□□□ -0.8
MCF2L-216ENST00000439475 PRAMEF17Q5VTA0 474 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 RHBDD2Q6NTF9 364 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 C8orf74Q6P047 294 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 TRMT10BQ6PF06 316 aaKnown RBP10.06□□□□□ -0.8
MCF2L-216ENST00000439475 PAQR3Q6TCH7 311 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 ZNF517Q6ZMY9 492 aaPredicted RBP10.06□□□□□ -0.8
MCF2L-216ENST00000439475 CEP128Q6ZU80 1094 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 C3orf62Q6ZUJ4 267 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 CYS1Q717R9 158 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 STRA8Q7Z7C7 330 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 FAM20CQ8IXL6 584 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 NKAPQ8N5F7 415 aaKnown RBP10.06□□□□□ -0.8
MCF2L-216ENST00000439475 ZNF655Q8N720 491 aaPredicted RBP10.06□□□□□ -0.8
MCF2L-216ENST00000439475 GIMAP7Q8NHV1 300 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 EEF1AKMT1Q8WVE0 214 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 APOBEC4Q8WW27 367 aaKnown RBP10.06□□□□□ -0.8
MCF2L-216ENST00000439475 THAP4Q8WY91 577 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 MIPEPQ99797 713 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 SELENOSQ9BQE4 189 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 DHRS4Q9BTZ2 278 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 ACAT2Q9BWD1 397 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 NLNQ9BYT8 704 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 PHACTR1Q9C0D0 580 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 PCBD2Q9H0N5 130 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 PARVBQ9HBI1 364 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 NDOR1Q9UHB4 597 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 SNX7Q9UNH6 387 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 MRPS18BQ9Y676 258 aaKnown RBP10.06□□□□□ -0.8
MCF2L-216ENST00000439475 FAM208BQ5VWN6 2430 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 PKD1L2Q7Z442 2459 aa10.06□□□□□ -0.8
MCF2L-216ENST00000439475 SEC16AO15027 2179 aa10.05□□□□□ -0.8
MCF2L-216ENST00000439475 A0A0J9YVX5 310 aa10.05□□□□□ -0.8
MCF2L-216ENST00000439475 CDC14CA4D256 554 aa10.05□□□□□ -0.8
MCF2L-216ENST00000439475 TXNDC9O14530 226 aa10.05□□□□□ -0.8
MCF2L-216ENST00000439475 TERTO14746 1132 aaKnown RBP10.05□□□□□ -0.8
MCF2L-216ENST00000439475 F7P08709 466 aaPredicted RBP10.05□□□□□ -0.8
MCF2L-216ENST00000439475 SAT1P21673 171 aa10.05□□□□□ -0.8
MCF2L-216ENST00000439475 CCND1P24385 295 aa10.05□□□□□ -0.8
MCF2L-216ENST00000439475 SSTR1P30872 391 aa10.05□□□□□ -0.8
MCF2L-216ENST00000439475 LY6DQ14210 128 aa10.05□□□□□ -0.8
MCF2L-216ENST00000439475 RBM20Q5T481 1227 aaKnown RBP10.05□□□□□ -0.8
MCF2L-216ENST00000439475 MLIPQ5VWP3 458 aa10.05□□□□□ -0.8
MCF2L-216ENST00000439475 FCRL6Q6DN72 434 aa10.05□□□□□ -0.8
MCF2L-216ENST00000439475 SUSD1Q6UWL2 747 aa10.05□□□□□ -0.8
MCF2L-216ENST00000439475 PIWIL4Q7Z3Z4 852 aaKnown RBP10.05□□□□□ -0.8
MCF2L-216ENST00000439475 SLC38A9Q8NBW4 561 aa10.05□□□□□ -0.8
MCF2L-216ENST00000439475 KIF18AQ8NI77 898 aa10.05□□□□□ -0.8
MCF2L-216ENST00000439475 ZNF480Q8WV37 535 aa10.05□□□□□ -0.8
MCF2L-216ENST00000439475 LINGO1Q96FE5 620 aa10.05□□□□□ -0.8
MCF2L-216ENST00000439475 DPH7Q9BTV6 452 aa10.05□□□□□ -0.8
MCF2L-216ENST00000439475 TSPYL1Q9H0U9 437 aa10.05□□□□□ -0.8
MCF2L-216ENST00000439475 ACTL8Q9H568 366 aa10.05□□□□□ -0.8
MCF2L-216ENST00000439475 AKIRIN1Q9H9L7 192 aaPredicted RBP10.05□□□□□ -0.8
MCF2L-216ENST00000439475 ABCF3Q9NUQ8 709 aa10.05□□□□□ -0.8
MCF2L-216ENST00000439475 GEMIN8Q9NWZ8 242 aaKnown RBP10.05□□□□□ -0.8
MCF2L-216ENST00000439475 IFT80Q9P2H3 777 aaPredicted RBP10.05□□□□□ -0.8
MCF2L-216ENST00000439475 KLHL20Q9Y2M5 609 aa10.05□□□□□ -0.8
MCF2L-216ENST00000439475 KLK4Q9Y5K2 254 aa10.05□□□□□ -0.8
MCF2L-216ENST00000439475 SNRNP200O75643 2136 aaKnown RBP10.04□□□□□ -0.8
MCF2L-216ENST00000439475 FAM95CA0A1B0GW59 222 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 A0A1W2PPV9 198 aa10.04□□□□□ -0.8
MCF2L-216ENST00000439475 CTAGE15A4D2H0 777 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms