RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 CYP4B1P13584 511 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 ARSAP15289 507 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 MANFP55145 182 aaKnown RBP11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 MYBPC1Q00872 1141 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 CSTF3Q12996 717 aaKnown RBP11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 CYP4Z1Q86W10 505 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 HID1Q8IV36 788 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 GPR26Q8NDV2 337 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 WFDC5Q8TCV5 224 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 FGF13Q92913 245 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 WBP2Q969T9 261 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 LRRC58Q96CX6 371 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 CARS2Q9HA77 564 aaKnown RBP11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 VPS29Q9UBQ0 182 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 DNAJC15Q9Y5T4 150 aa11.28□□□□□ -0.6
TRAPPC9-202ENST00000438773 ELOVL7A1L3X0 281 aa11.27□□□□□ -0.6
TRAPPC9-202ENST00000438773 MROH6A6NGR9 719 aa11.27□□□□□ -0.6
TRAPPC9-202ENST00000438773 J3QRK9 145 aa11.27□□□□□ -0.6
TRAPPC9-202ENST00000438773 FPGTO14772 594 aa11.27□□□□□ -0.6
TRAPPC9-202ENST00000438773 OR1F1O43749 312 aa11.27□□□□□ -0.6
TRAPPC9-202ENST00000438773 PRAMEF12O95522 483 aa11.27□□□□□ -0.6
TRAPPC9-202ENST00000438773 MTTPP55157 894 aa11.27□□□□□ -0.6
TRAPPC9-202ENST00000438773 GRB7Q14451 532 aa11.27□□□□□ -0.6
TRAPPC9-202ENST00000438773 SLBPQ14493 270 aaKnown RBP eCLIP11.27□□□□□ -0.6
TRAPPC9-202ENST00000438773 C6orf136Q5SQH8 315 aa11.27□□□□□ -0.6
TRAPPC9-202ENST00000438773 PLEKHS1Q5SXH7 462 aa11.27□□□□□ -0.6
TRAPPC9-202ENST00000438773 TBC1D21Q8IYX1 336 aa11.27□□□□□ -0.6
TRAPPC9-202ENST00000438773 ADGRG2Q8IZP9 1017 aa11.27□□□□□ -0.6
TRAPPC9-202ENST00000438773 LILRA2Q8N149 483 aa11.27□□□□□ -0.6
TRAPPC9-202ENST00000438773 CD200R1Q8TD46 325 aa11.27□□□□□ -0.6
TRAPPC9-202ENST00000438773 HMGB4Q8WW32 186 aa11.27□□□□□ -0.6
TRAPPC9-202ENST00000438773 FBXL8Q96CD0 374 aa11.27□□□□□ -0.6
TRAPPC9-202ENST00000438773 ZC4H2Q9NQZ6 224 aa11.27□□□□□ -0.6
TRAPPC9-202ENST00000438773 DNAAF2Q9NVR5 837 aaKnown RBP11.27□□□□□ -0.6
TRAPPC9-202ENST00000438773 ITM2BQ9Y287 266 aa11.27□□□□□ -0.6
TRAPPC9-202ENST00000438773 WDR81Q562E7 1941 aa11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 FAM92AA1XBS5 289 aa11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 TRIM24O15164 1050 aa11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 AP2A2O94973 939 aa11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 TGFB1P01137 390 aa11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 VIPP01282 170 aa11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 ENO2P09104 434 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 IRS1P35568 1242 aa11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 SEPHS1P49903 392 aa11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 MS4A2Q01362 244 aa11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 CYP4F3Q08477 520 aa11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 RSBN1Q5VWQ0 802 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 TRIM40Q6P9F5 258 aa11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 THOC6Q86W42 341 aaKnown RBP11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 TRAM1L1Q8N609 369 aa11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 ADCY4Q8NFM4 1077 aa11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 OR4A15Q8NGL6 344 aa11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 PSMA8Q8TAA3 256 aa11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 LCN9Q8WX39 176 aa11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 MYEOVQ96EZ4 313 aa11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 ASCC3Q8N3C0 2202 aaKnown RBP11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 LINC01553A4QN01 128 aa11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 SAP18O00422 153 aaKnown RBP11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 SRPRAP08240 638 aaKnown RBP11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 GSTM1P09488 218 aa11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 PPIBP23284 216 aaKnown RBP11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 TLX1P31314 330 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 ACTR1BP42025 376 aa11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 ACTR1AP61163 376 aa11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 ADRM1Q16186 407 aa11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 FGD3Q5JSP0 725 aa11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 TJAP1Q5JTD0 557 aa11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 OGFRL1Q5TC84 451 aaPredicted RBP11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 FAM219BQ5XKK7 198 aa11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 OGFOD2Q6N063 350 aa11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 CBR4Q8N4T8 237 aa11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 OR9Q1Q8NGQ5 310 aa11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 PROX1Q92786 737 aa11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 COQ10BQ9H8M1 238 aa11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 KLHL28Q9NXS3 571 aa11.27□□□□□ -0.61
TRAPPC9-202ENST00000438773 A0A1W2PP55 124 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 MANBAO00462 879 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 IGLV3-27P01718 113 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 MYOGP15173 224 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 MAPK12P53778 367 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 ALDH6A1Q02252 535 aaKnown RBP11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 TDHQ8IZJ6 230 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 HTRA1Q92743 480 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 ARMC5Q96C12 935 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 EFCAB11Q9BUY7 163 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 ZIM2Q9NZV7 527 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 COLEC10Q9Y6Z7 277 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 ARID2Q68CP9 1835 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 PLK4O00444 970 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 GRID2O43424 1007 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 VARSP26640 1264 aaKnown RBP11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 NKX3-2P78367 333 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 LAPTM5Q13571 262 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 TMEM240Q5SV17 173 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 EGFLAMQ63HQ2 1017 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 SUSD1Q6UWL2 747 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 ENPP7Q6UWV6 458 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 XKR5Q6UX68 686 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 FATE1Q969F0 183 aa11.26□□□□□ -0.61
TRAPPC9-202ENST00000438773 PKP2Q99959 881 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms