RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 APLFQ8IW19 511 aaPredicted RBP3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 LGI2Q8N0V4 545 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 EID3Q8N140 333 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 NIPA2Q8N8Q9 360 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 NOA1Q8NC60 698 aaKnown RBP3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 OR4K1Q8NGD4 311 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 HPSE2Q8WWQ2 592 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 TMEM190Q8WZ59 177 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 OTUB1Q96FW1 271 aaPredicted RBP3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 FER1L6-AS2Q96M78 137 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 FERMT1Q9BQL6 677 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 MRPL9Q9BYD2 267 aaKnown RBP3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 BARHL1Q9BZE3 327 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 ANKRD2Q9GZV1 360 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 ZMYND12Q9H0C1 365 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 FN3KQ9H479 309 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 XAB2Q9HCS7 855 aaKnown RBP3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 ZCCHC17Q9NP64 241 aaKnown RBP3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 PPANQ9NQ55 473 aaKnown RBP3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 INTS10Q9NVR2 710 aaKnown RBP3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 GAB2Q9UQC2 676 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 LIPGQ9Y5X9 500 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 STK36Q9NRP7 1315 aa3.42□□□□□ -1.86
LSM1P1-201ENST00000438629 TRAV24A0A0B4J272 114 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 HHLA1C9JL84 531 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 EPHB6O15197 1021 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 AP5Z1O43299 807 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 GLRA3O75311 464 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 RPS6KA5O75582 802 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 NGFP01138 241 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 FAM157CP0CG43 387 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 RNF224P0DH78 156 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 MAGEA11P43364 429 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 DLK1P80370 383 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 ZNF415Q09FC8 603 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 TAF10Q12962 218 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 SMC1AQ14683 1233 aaKnown RBP3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 NPTX1Q15818 432 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 FAM174BQ3ZCQ3 159 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 GTDC1Q4AE62 458 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 ODF2Q5BJF6 829 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 SPDYCQ5MJ68 293 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 HECTD3Q5T447 861 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 LCN1P1Q5VSP4 162 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 ARHGEF16Q5VV41 709 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 MOXD1Q6UVY6 613 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 ENPP7Q6UWV6 458 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 G2E3Q7L622 706 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 SLC16A9Q7RTY1 509 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 ZNF329Q86UD4 541 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 RTN4RL2Q86UN3 420 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 PIGZQ86VD9 579 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 METTL23Q86XA0 190 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 SNX32Q86XE0 403 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 NBPF5PQ86XG9 351 aaPredicted RBP3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 KLHDC8BQ8IXV7 354 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 THNSL1Q8IYQ7 743 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 MSANTD4Q8NCY6 345 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 OR11H4Q8NGC9 324 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 OR13C3Q8NGS6 347 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 C9orf43Q8TAL5 461 aaPredicted RBP3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 RSPH1Q8WYR4 309 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 NR4A3Q92570 626 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 CENPTQ96BT3 561 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 ZNF501Q96CX3 271 aaPredicted RBP3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 SENP5Q96HI0 755 aaPredicted RBP3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 FAM71F1Q96KD3 344 aaPredicted RBP3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 FAM20AQ96MK3 541 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 MYCBPQ99417 103 aaPredicted RBP3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 FAM207AQ9NSI2 230 aaPredicted RBP3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 INTS9Q9NV88 658 aaKnown RBP3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 P4HTMQ9NXG6 502 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 C19orf25Q9UFG5 118 aaPredicted RBP3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 POLLQ9UGP5 575 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 MAN1B1Q9UKM7 699 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 RNF150Q9ULK6 438 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 STUB1Q9UNE7 303 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 RIPK3Q9Y572 518 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 KIAA1210Q9ULL0 1709 aa3.41□□□□□ -1.86
LSM1P1-201ENST00000438629 TCF20Q9UGU0 1960 aaKnown RBP3.4□□□□□ -1.86
LSM1P1-201ENST00000438629 A0A087WV48 116 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 GRID2O43424 1007 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 SNX3O60493 162 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 SOCS5O75159 536 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 CDK2AP2O75956 126 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 AP2A2O94973 939 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 MOCS3O95396 460 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 PENKP01210 267 aaPredicted RBP3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 HMBSP08397 361 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 GP1BBP13224 206 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 ACAT1P24752 427 aaKnown RBP3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 GLIPR1P48060 266 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 TDO2P48775 406 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 VAMP7P51809 220 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 ILF2Q12905 390 aaKnown RBP3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 ITGA9Q13797 1035 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 P2RY6Q15077 328 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 UGCGQ16739 394 aa3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 TWISTNBQ3B726 338 aaPredicted RBP3.4□□□□□ -1.87
LSM1P1-201ENST00000438629 KRTAP24-1Q3LI83 254 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms