RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 GPR26Q8NDV2 337 aa10.41□□□□□ -0.74
RTN4-211ENST00000438462 TNIP2Q8NFZ5 429 aa10.41□□□□□ -0.74
RTN4-211ENST00000438462 OR52E1Q8NGJ3 308 aa10.41□□□□□ -0.74
RTN4-211ENST00000438462 LMO3Q8TAP4 145 aa10.41□□□□□ -0.74
RTN4-211ENST00000438462 NTAN1Q96AB6 310 aa10.41□□□□□ -0.74
RTN4-211ENST00000438462 PKP2Q99959 881 aa10.41□□□□□ -0.74
RTN4-211ENST00000438462 CLSTN2Q9H4D0 955 aa10.41□□□□□ -0.74
RTN4-211ENST00000438462 FAM8A1Q9UBU6 413 aa10.41□□□□□ -0.74
RTN4-211ENST00000438462 TESMINQ9Y4I5 508 aa10.41□□□□□ -0.74
RTN4-211ENST00000438462 TMEM89A2RUT3 159 aa10.4□□□□□ -0.74
RTN4-211ENST00000438462 FAM166BA8MTA8 275 aa10.4□□□□□ -0.74
RTN4-211ENST00000438462 POLR2DO15514 142 aaKnown RBP10.4□□□□□ -0.74
RTN4-211ENST00000438462 HNF1AP20823 631 aa10.4□□□□□ -0.74
RTN4-211ENST00000438462 FBLP22087 321 aaKnown RBP10.4□□□□□ -0.74
RTN4-211ENST00000438462 WNT3P56703 355 aa10.4□□□□□ -0.74
RTN4-211ENST00000438462 ANKRD20A8PQ5CZ79 823 aa10.4□□□□□ -0.74
RTN4-211ENST00000438462 PDPK2PQ6A1A2 396 aa10.4□□□□□ -0.74
RTN4-211ENST00000438462 MAATS1Q7Z4T9 603 aa10.4□□□□□ -0.74
RTN4-211ENST00000438462 SLC5A8Q8N695 610 aa10.4□□□□□ -0.74
RTN4-211ENST00000438462 GDAP1Q8TB36 358 aa10.4□□□□□ -0.74
RTN4-211ENST00000438462 CCHCR1Q8TD31 782 aa10.4□□□□□ -0.74
RTN4-211ENST00000438462 OR2A14Q96R47 310 aa10.4□□□□□ -0.74
RTN4-211ENST00000438462 LYSMD1Q96S90 227 aa10.4□□□□□ -0.74
RTN4-211ENST00000438462 SCAND2PQ9GZW5 306 aaPredicted RBP10.4□□□□□ -0.74
RTN4-211ENST00000438462 THAP2Q9H0W7 228 aa10.4□□□□□ -0.74
RTN4-211ENST00000438462 RBSNQ9H1K0 784 aa10.4□□□□□ -0.74
RTN4-211ENST00000438462 METTL5Q9NRN9 209 aaKnown RBP10.4□□□□□ -0.74
RTN4-211ENST00000438462 ZNF629Q9UEG4 869 aaPredicted RBP10.4□□□□□ -0.74
RTN4-211ENST00000438462 ACAD8Q9UKU7 415 aa10.4□□□□□ -0.74
RTN4-211ENST00000438462 TMPRSS11EQ9UL52 423 aa10.4□□□□□ -0.74
RTN4-211ENST00000438462 WBP11Q9Y2W2 641 aaKnown RBP10.4□□□□□ -0.74
RTN4-211ENST00000438462 A0A096LNT2 108 aa10.39□□□□□ -0.75
RTN4-211ENST00000438462 OR2AG2A6NM03 316 aa10.39□□□□□ -0.75
RTN4-211ENST00000438462 LINC01387J3KSC0 135 aa10.39□□□□□ -0.75
RTN4-211ENST00000438462 CETN3O15182 167 aa10.39□□□□□ -0.75
RTN4-211ENST00000438462 SLC4A1P02730 911 aa10.39□□□□□ -0.75
RTN4-211ENST00000438462 GABRA1P14867 456 aa10.39□□□□□ -0.75
RTN4-211ENST00000438462 AMPD1P23109 780 aa10.39□□□□□ -0.75
RTN4-211ENST00000438462 CYB561P49447 251 aa10.39□□□□□ -0.75
RTN4-211ENST00000438462 ZNF136P52737 540 aa10.39□□□□□ -0.75
RTN4-211ENST00000438462 TPI1P60174 286 aa10.39□□□□□ -0.75
RTN4-211ENST00000438462 WLSQ5T9L3 541 aa10.39□□□□□ -0.75
RTN4-211ENST00000438462 FAM173BQ6P4H8 233 aa10.39□□□□□ -0.75
RTN4-211ENST00000438462 SLFN11Q7Z7L1 901 aa10.39□□□□□ -0.75
RTN4-211ENST00000438462 NPWQ8N729 165 aa10.39□□□□□ -0.75
RTN4-211ENST00000438462 LPCAT1Q8NF37 534 aa10.39□□□□□ -0.75
RTN4-211ENST00000438462 FLVCR1-AS1Q8TAF5 88 aa10.39□□□□□ -0.75
RTN4-211ENST00000438462 ZFAND2BQ8WV99 257 aa10.39□□□□□ -0.75
RTN4-211ENST00000438462 C18orf8Q96DM3 657 aa10.39□□□□□ -0.75
RTN4-211ENST00000438462 RBM41Q96IZ5 413 aaKnown RBP10.39□□□□□ -0.75
RTN4-211ENST00000438462 TUBGCP2Q9BSJ2 902 aa10.39□□□□□ -0.75
RTN4-211ENST00000438462 ZCCHC2Q9C0B9 1178 aaKnown RBP10.39□□□□□ -0.75
RTN4-211ENST00000438462 SLCO5A1Q9H2Y9 848 aa10.39□□□□□ -0.75
RTN4-211ENST00000438462 ZDHHC11Q9H8X9 412 aa10.39□□□□□ -0.75
RTN4-211ENST00000438462 C14orf105Q9NVL8 296 aa10.39□□□□□ -0.75
RTN4-211ENST00000438462 CHKBQ9Y259 395 aa10.39□□□□□ -0.75
RTN4-211ENST00000438462 PCDHGB1Q9Y5G3 927 aa10.39□□□□□ -0.75
RTN4-211ENST00000438462 HEBP2Q9Y5Z4 205 aa10.39□□□□□ -0.75
RTN4-211ENST00000438462 BECN2A8MW95 431 aa10.38□□□□□ -0.75
RTN4-211ENST00000438462 FAM157AC9JC47 383 aa10.38□□□□□ -0.75
RTN4-211ENST00000438462 TMCC2O75069 709 aa10.38□□□□□ -0.75
RTN4-211ENST00000438462 C8orf89P0DMQ9 161 aa10.38□□□□□ -0.75
RTN4-211ENST00000438462 TPP2P29144 1249 aaPredicted RBP10.38□□□□□ -0.75
RTN4-211ENST00000438462 SDC4P31431 198 aa10.38□□□□□ -0.75
RTN4-211ENST00000438462 CYLC1P35663 651 aaPredicted RBP10.38□□□□□ -0.75
RTN4-211ENST00000438462 USP8P40818 1118 aa10.38□□□□□ -0.75
RTN4-211ENST00000438462 PRCPP42785 496 aa10.38□□□□□ -0.75
RTN4-211ENST00000438462 PTPN9P43378 593 aa10.38□□□□□ -0.75
RTN4-211ENST00000438462 GABRB2P47870 512 aa10.38□□□□□ -0.75
RTN4-211ENST00000438462 AGFG1P52594 562 aaKnown RBP10.38□□□□□ -0.75
RTN4-211ENST00000438462 AP1B1Q10567 949 aa10.38□□□□□ -0.75
RTN4-211ENST00000438462 RALGPS1Q5JS13 557 aa10.38□□□□□ -0.75
RTN4-211ENST00000438462 DNM1P46Q6ZS02 220 aa10.38□□□□□ -0.75
RTN4-211ENST00000438462 LANCL3Q6ZV70 420 aa10.38□□□□□ -0.75
RTN4-211ENST00000438462 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.38□□□□□ -0.751e-6■■■■■ 116
RTN4-211ENST00000438462 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.38□□□□□ -0.75
RTN4-211ENST00000438462 BEND7Q8N7W2 519 aaPredicted RBP10.38□□□□□ -0.75
RTN4-211ENST00000438462 RASGEF1AQ8N9B8 481 aa10.38□□□□□ -0.75
RTN4-211ENST00000438462 SEMA6DQ8NFY4 1073 aa10.38□□□□□ -0.75
RTN4-211ENST00000438462 FAM172AQ8WUF8 416 aa10.38□□□□□ -0.75
RTN4-211ENST00000438462 EID2BQ96D98 161 aa10.38□□□□□ -0.75
RTN4-211ENST00000438462 CAPZA3Q96KX2 299 aa10.38□□□□□ -0.75
RTN4-211ENST00000438462 TTC25Q96NG3 672 aa10.38□□□□□ -0.75
RTN4-211ENST00000438462 ZNF599Q96NL3 588 aa10.38□□□□□ -0.75
RTN4-211ENST00000438462 TNFRSF13CQ96RJ3 184 aa10.38□□□□□ -0.75
RTN4-211ENST00000438462 FERD3LQ96RJ6 166 aa10.38□□□□□ -0.75
RTN4-211ENST00000438462 YIPF2Q9BWQ6 316 aa10.38□□□□□ -0.75
RTN4-211ENST00000438462 ANGPTL4Q9BY76 406 aa10.38□□□□□ -0.75
RTN4-211ENST00000438462 TFB2MQ9H5Q4 396 aaKnown RBP10.38□□□□□ -0.75
RTN4-211ENST00000438462 CDCP1Q9H5V8 836 aa10.38□□□□□ -0.75
RTN4-211ENST00000438462 GALNT8Q9NY28 637 aa10.38□□□□□ -0.75
RTN4-211ENST00000438462 SPHK1Q9NYA1 384 aa10.38□□□□□ -0.75
RTN4-211ENST00000438462 TRPC4Q9UBN4 977 aa10.38□□□□□ -0.75
RTN4-211ENST00000438462 KLHL20Q9Y2M5 609 aa10.38□□□□□ -0.75
RTN4-211ENST00000438462 MALRD1Q5VYJ5 2156 aa10.38□□□□□ -0.75
RTN4-211ENST00000438462 SLC35F4A4IF30 521 aa10.37□□□□□ -0.75
RTN4-211ENST00000438462 C2orf81A6NN90 581 aa10.37□□□□□ -0.75
RTN4-211ENST00000438462 KDM4EB2RXH2 506 aaPredicted RBP10.37□□□□□ -0.75
RTN4-211ENST00000438462 ACOT7O00154 380 aa10.37□□□□□ -0.75
RTN4-211ENST00000438462 AQP7O14520 342 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms