RNA–Protein interactions for RNA: ENST00000437681.1

SNHG3-202, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 2 BASIC

Gene SNHG3, Length 2,614 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-202ENST00000437681 VIPAS39Q9H9C1 493 aa11.09□□□□□ -0.63
SNHG3-202ENST00000437681 FANCEQ9HB96 536 aa11.09□□□□□ -0.63
SNHG3-202ENST00000437681 COPG2Q9UBF2 871 aa11.09□□□□□ -0.63
SNHG3-202ENST00000437681 ANGPTL2Q9UKU9 493 aa11.09□□□□□ -0.63
SNHG3-202ENST00000437681 SNX7Q9UNH6 387 aa11.09□□□□□ -0.63
SNHG3-202ENST00000437681 GPR179Q6PRD1 2367 aa11.08□□□□□ -0.63
SNHG3-202ENST00000437681 OR6C74A6NCV1 312 aa11.08□□□□□ -0.64
SNHG3-202ENST00000437681 STX16-NPEPL1H3BU86 382 aa11.08□□□□□ -0.64
SNHG3-202ENST00000437681 TXNDC9O14530 226 aa11.08□□□□□ -0.64
SNHG3-202ENST00000437681 STX16O14662 325 aa11.08□□□□□ -0.64
SNHG3-202ENST00000437681 CAPN5O15484 640 aaPredicted RBP11.08□□□□□ -0.64
SNHG3-202ENST00000437681 HBQ1P09105 142 aa11.08□□□□□ -0.64
SNHG3-202ENST00000437681 SERPINB1P30740 379 aa11.08□□□□□ -0.64
SNHG3-202ENST00000437681 CLNS1AP54105 237 aaKnown RBP11.08□□□□□ -0.64
SNHG3-202ENST00000437681 SLC18A2Q05940 514 aa11.08□□□□□ -0.64
SNHG3-202ENST00000437681 ACTN3Q08043 901 aaPredicted RBP11.08□□□□□ -0.64
SNHG3-202ENST00000437681 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.08□□□□□ -0.64
SNHG3-202ENST00000437681 ZC3H12BQ5HYM0 836 aaKnown RBP11.08□□□□□ -0.64
SNHG3-202ENST00000437681 DHRS13Q6UX07 377 aa11.08□□□□□ -0.64
SNHG3-202ENST00000437681 ZNF574Q6ZN55 896 aaPredicted RBP11.08□□□□□ -0.64
SNHG3-202ENST00000437681 CAPN12Q6ZSI9 719 aa11.08□□□□□ -0.64
SNHG3-202ENST00000437681 LRRC70Q7Z2Q7 622 aa11.08□□□□□ -0.64
SNHG3-202ENST00000437681 PIWIL4Q7Z3Z4 852 aaKnown RBP11.08□□□□□ -0.64
SNHG3-202ENST00000437681 KIRREL3Q8IZU9 778 aa11.08□□□□□ -0.64
SNHG3-202ENST00000437681 BCAS4Q8TDM0 211 aa11.08□□□□□ -0.64
SNHG3-202ENST00000437681 CCDC126Q96EE4 140 aa11.08□□□□□ -0.64
SNHG3-202ENST00000437681 ZNF285Q96NJ3 590 aa11.08□□□□□ -0.64
SNHG3-202ENST00000437681 MRPL57Q9BQC6 102 aaKnown RBP11.08□□□□□ -0.64
SNHG3-202ENST00000437681 HGH1Q9BTY7 390 aa11.08□□□□□ -0.64
SNHG3-202ENST00000437681 C1QTNF3Q9BXJ4 246 aa11.08□□□□□ -0.64
SNHG3-202ENST00000437681 TMEM184CQ9NVA4 438 aa11.08□□□□□ -0.64
SNHG3-202ENST00000437681 STOX2Q9P2F5 926 aaPredicted RBP11.08□□□□□ -0.64
SNHG3-202ENST00000437681 SLC17A6Q9P2U8 582 aa11.08□□□□□ -0.64
SNHG3-202ENST00000437681 PCNX2A6NKB5 2137 aa11.08□□□□□ -0.64
SNHG3-202ENST00000437681 KCNE1BA0A087WTH5 132 aa11.08□□□□□ -0.64
SNHG3-202ENST00000437681 A0A096LPK6 155 aa11.08□□□□□ -0.64
SNHG3-202ENST00000437681 NVLO15381 856 aaKnown RBP11.08□□□□□ -0.64
SNHG3-202ENST00000437681 MT-ND3P03897 115 aa11.08□□□□□ -0.64
SNHG3-202ENST00000437681 S100BP04271 92 aaPredicted RBP11.08□□□□□ -0.64
SNHG3-202ENST00000437681 CCDC166P0CW27 439 aa11.08□□□□□ -0.64
SNHG3-202ENST00000437681 UGT2B7P16662 529 aa11.08□□□□□ -0.64
SNHG3-202ENST00000437681 CSTF2P33240 577 aaKnown RBP eCLIP11.08□□□□□ -0.64
SNHG3-202ENST00000437681 EFTUD2Q15029 972 aaKnown RBP eCLIP11.08□□□□□ -0.642e-79■■■■□ 23.3
SNHG3-202ENST00000437681 KCTD19Q17RG1 926 aaPredicted RBP11.08□□□□□ -0.64
SNHG3-202ENST00000437681 CAPN13Q6MZZ7 669 aaPredicted RBP11.08□□□□□ -0.64
SNHG3-202ENST00000437681 NIPAL1Q6NVV3 410 aa11.08□□□□□ -0.64
SNHG3-202ENST00000437681 CEACAM20Q6UY09 585 aa11.08□□□□□ -0.64
SNHG3-202ENST00000437681 IQCKQ8N0W5 287 aa11.08□□□□□ -0.64
SNHG3-202ENST00000437681 Q8N9G6 341 aaPredicted RBP11.08□□□□□ -0.64
SNHG3-202ENST00000437681 RSC1A1Q92681 617 aa11.08□□□□□ -0.64
SNHG3-202ENST00000437681 WDR34Q96EX3 536 aa11.08□□□□□ -0.64
SNHG3-202ENST00000437681 LRFN5Q96NI6 719 aa11.08□□□□□ -0.64
SNHG3-202ENST00000437681 CENPOQ9BU64 300 aa11.08□□□□□ -0.64
SNHG3-202ENST00000437681 ASPSCR1Q9BZE9 553 aa11.08□□□□□ -0.64
SNHG3-202ENST00000437681 CCDC177Q9NQR7 707 aaPredicted RBP11.08□□□□□ -0.64
SNHG3-202ENST00000437681 NFS1Q9Y697 457 aa11.08□□□□□ -0.64
SNHG3-202ENST00000437681 A0A1W2PPV9 198 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 TRIM49D1C9J1S8 452 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 E7ENX8 843 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 BTN3A3O00478 584 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 GLRA3O75311 464 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 RFPL1O75677 317 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 ONECUT2O95948 504 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 CD63P08962 238 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 IMPA1P29218 277 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 PRDX3P30048 256 aaKnown RBP11.07□□□□□ -0.64
SNHG3-202ENST00000437681 RPA3P35244 121 aaPredicted RBP11.07□□□□□ -0.64
SNHG3-202ENST00000437681 SLC6A12P48065 614 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 PRKAA2P54646 552 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 TAP2Q03519 686 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 PDCD2Q16342 344 aaPredicted RBP11.07□□□□□ -0.64
SNHG3-202ENST00000437681 CCDC153Q494R4 210 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 TNFAIP8L3Q5GJ75 292 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 MICALCLQ6ZW33 695 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 RAPH1Q70E73 1250 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 RNF44Q7L0R7 432 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 ISCA2Q86U28 154 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 GPSM1Q86YR5 675 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 TBC1D19Q8N5T2 526 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 BMPERQ8N8U9 685 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 OR4E2Q8NGC2 313 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 NCSTNQ92542 709 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 GPR78Q96P69 363 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 TRAPPC9Q96Q05 1148 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 ATOH8Q96SQ7 321 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 PTBP2Q9UKA9 531 aaKnown RBP11.07□□□□□ -0.64
SNHG3-202ENST00000437681 CDRT15L2A8MXV6 281 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 POC1B-GALNT4F8VUJ3 575 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 SRPX2O60687 465 aaPredicted RBP11.07□□□□□ -0.64
SNHG3-202ENST00000437681 UGDHO60701 494 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 EZRP15311 586 aaKnown RBP11.07□□□□□ -0.64
SNHG3-202ENST00000437681 ZNF24P17028 368 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 CRHR1P34998 444 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 CASP2P42575 452 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 BDKRB1P46663 353 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 SLC18A1P54219 525 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 ALDH18A1P54886 795 aaKnown RBP11.07□□□□□ -0.64
SNHG3-202ENST00000437681 PRDX1Q06830 199 aaKnown RBP11.07□□□□□ -0.64
SNHG3-202ENST00000437681 LAPTM5Q13571 262 aa11.07□□□□□ -0.64
SNHG3-202ENST00000437681 PCBP2Q15366 365 aaKnown RBP eCLIP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms