RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 XKR3Q5GH77 459 aa2.85□□□□□ -1.95
CLK1-204ENST00000432425 FAM205BPQ63HN1 556 aa2.85□□□□□ -1.95
CLK1-204ENST00000432425 BTN2A1Q7KYR7 527 aa2.85□□□□□ -1.95
CLK1-204ENST00000432425 G2E3Q7L622 706 aa2.85□□□□□ -1.95
CLK1-204ENST00000432425 KRT77Q7Z794 578 aa2.85□□□□□ -1.95
CLK1-204ENST00000432425 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.85□□□□□ -1.95
CLK1-204ENST00000432425 MAPK15Q8TD08 544 aa2.85□□□□□ -1.95
CLK1-204ENST00000432425 PRPF31Q8WWY3 499 aaKnown RBP2.85□□□□□ -1.95
CLK1-204ENST00000432425 SYN2Q92777 582 aaPredicted RBP2.85□□□□□ -1.95
CLK1-204ENST00000432425 SPACA9Q96E40 222 aaPredicted RBP2.85□□□□□ -1.95
CLK1-204ENST00000432425 OMA1Q96E52 524 aa2.85□□□□□ -1.95
CLK1-204ENST00000432425 ARSGQ96EG1 525 aa2.85□□□□□ -1.95
CLK1-204ENST00000432425 RSRC1Q96IZ7 334 aaKnown RBP2.85□□□□□ -1.95
CLK1-204ENST00000432425 MRPL1Q9BYD6 325 aaKnown RBP2.85□□□□□ -1.95
CLK1-204ENST00000432425 RSPH9Q9H1X1 276 aaPredicted RBP2.85□□□□□ -1.95
CLK1-204ENST00000432425 MAN2C1Q9NTJ4 1040 aa2.85□□□□□ -1.95
CLK1-204ENST00000432425 PANK4Q9NVE7 773 aa2.85□□□□□ -1.95
CLK1-204ENST00000432425 NUDT4Q9NZJ9 180 aa2.85□□□□□ -1.95
CLK1-204ENST00000432425 ANKRD18BA2A2Z9 1011 aa2.84□□□□□ -1.95
CLK1-204ENST00000432425 A8MV72 311 aaPredicted RBP2.84□□□□□ -1.95
CLK1-204ENST00000432425 ENTPD3O75355 529 aa2.84□□□□□ -1.95
CLK1-204ENST00000432425 GJB3O75712 270 aa2.84□□□□□ -1.95
CLK1-204ENST00000432425 SEC24AO95486 1093 aa2.84□□□□□ -1.95
CLK1-204ENST00000432425 SMIM18P0DKX4 95 aa2.84□□□□□ -1.95
CLK1-204ENST00000432425 SLC2A2P11168 524 aaPredicted RBP2.84□□□□□ -1.95
CLK1-204ENST00000432425 VDRP11473 427 aa2.84□□□□□ -1.95
CLK1-204ENST00000432425 PRKACGP22612 351 aa2.84□□□□□ -1.95
CLK1-204ENST00000432425 HOXC13P31276 330 aa2.84□□□□□ -1.95
CLK1-204ENST00000432425 CSTF2P33240 577 aaKnown RBP eCLIP2.84□□□□□ -1.95
CLK1-204ENST00000432425 KRT2P35908 639 aa2.84□□□□□ -1.95
CLK1-204ENST00000432425 CASP2P42575 452 aa2.84□□□□□ -1.95
CLK1-204ENST00000432425 ZNF75DP51815 510 aa2.84□□□□□ -1.95
CLK1-204ENST00000432425 LBX1P52954 281 aa2.84□□□□□ -1.95
CLK1-204ENST00000432425 GSCP56915 257 aaPredicted RBP2.84□□□□□ -1.95
CLK1-204ENST00000432425 CYCSP99999 105 aaKnown RBP2.84□□□□□ -1.95
CLK1-204ENST00000432425 GCNT1Q02742 428 aa2.84□□□□□ -1.95
CLK1-204ENST00000432425 ELAVL2Q12926 359 aaKnown RBP2.84□□□□□ -1.95
CLK1-204ENST00000432425 FASTKD3Q14CZ7 662 aaKnown RBP2.84□□□□□ -1.95
CLK1-204ENST00000432425 SNAPC1Q16533 368 aa2.84□□□□□ -1.95
CLK1-204ENST00000432425 SYT14P1Q58G82 188 aa2.84□□□□□ -1.95
CLK1-204ENST00000432425 SLC35D3Q5M8T2 416 aa2.84□□□□□ -1.95
CLK1-204ENST00000432425 SLC25A47Q6Q0C1 308 aa2.84□□□□□ -1.95
CLK1-204ENST00000432425 Q6ZRP5 223 aa2.84□□□□□ -1.95
CLK1-204ENST00000432425 ARHGAP22Q7Z5H3 698 aa2.84□□□□□ -1.95
CLK1-204ENST00000432425 TMPRSS11BQ86T26 416 aa2.84□□□□□ -1.95
CLK1-204ENST00000432425 MINDY1Q8N5J2 469 aa2.84□□□□□ -1.95
CLK1-204ENST00000432425 AMER3Q8N944 861 aa2.84□□□□□ -1.95
CLK1-204ENST00000432425 SLC22A18Q96BI1 424 aa2.84□□□□□ -1.95
CLK1-204ENST00000432425 THOC1Q96FV9 657 aaKnown RBP2.84□□□□□ -1.95
CLK1-204ENST00000432425 ZNF486Q96H40 463 aaPredicted RBP2.84□□□□□ -1.95
CLK1-204ENST00000432425 NECTIN4Q96NY8 510 aa2.84□□□□□ -1.95
CLK1-204ENST00000432425 SHARPINQ9H0F6 387 aa2.84□□□□□ -1.95
CLK1-204ENST00000432425 TRPV4Q9HBA0 871 aa2.84□□□□□ -1.95
CLK1-204ENST00000432425 SLC35C2Q9NQQ7 365 aa2.84□□□□□ -1.95
CLK1-204ENST00000432425 TEX10Q9NXF1 929 aaPredicted RBP2.84□□□□□ -1.95
CLK1-204ENST00000432425 MRPL15Q9P015 296 aaKnown RBP2.84□□□□□ -1.95
CLK1-204ENST00000432425 KLK13Q9UKR3 277 aa2.84□□□□□ -1.95
CLK1-204ENST00000432425 TMEM5Q9Y2B1 443 aa2.84□□□□□ -1.95
CLK1-204ENST00000432425 PADI2Q9Y2J8 665 aa2.84□□□□□ -1.95
CLK1-204ENST00000432425 RSF1Q96T23 1441 aaPredicted RBP2.83□□□□□ -1.96
CLK1-204ENST00000432425 FEZF1A0PJY2 475 aa2.83□□□□□ -1.96
CLK1-204ENST00000432425 MEX3AA1L020 520 aaKnown RBP2.83□□□□□ -1.96
CLK1-204ENST00000432425 PI15O43692 258 aa2.83□□□□□ -1.96
CLK1-204ENST00000432425 DDHD2O94830 711 aa2.83□□□□□ -1.96
CLK1-204ENST00000432425 HAPLN1P10915 354 aaPredicted RBP2.83□□□□□ -1.96
CLK1-204ENST00000432425 DARSP14868 501 aaKnown RBP2.83□□□□□ -1.96
CLK1-204ENST00000432425 CYP2A7P20853 494 aa2.83□□□□□ -1.96
CLK1-204ENST00000432425 TLX1P31314 330 aaPredicted RBP2.83□□□□□ -1.96
CLK1-204ENST00000432425 EIF2DP41214 584 aaKnown RBP2.83□□□□□ -1.96
CLK1-204ENST00000432425 CSRP3P50461 194 aa2.83□□□□□ -1.96
CLK1-204ENST00000432425 MAT1AQ00266 395 aaKnown RBP2.83□□□□□ -1.96
CLK1-204ENST00000432425 GUCY2DQ02846 1103 aa2.83□□□□□ -1.96
CLK1-204ENST00000432425 CA9Q16790 459 aa2.83□□□□□ -1.96
CLK1-204ENST00000432425 TCTEX1D4Q5JR98 221 aa2.83□□□□□ -1.96
CLK1-204ENST00000432425 LINC00346Q8IVM7 164 aa2.83□□□□□ -1.96
CLK1-204ENST00000432425 OR10S1Q8NGN2 331 aa2.83□□□□□ -1.96
CLK1-204ENST00000432425 OR1L3Q8NH93 324 aa2.83□□□□□ -1.96
CLK1-204ENST00000432425 GTF3AQ92664 365 aaKnown RBP2.83□□□□□ -1.96
CLK1-204ENST00000432425 CENPTQ96BT3 561 aa2.83□□□□□ -1.96
CLK1-204ENST00000432425 C10orf90Q96M02 699 aa2.83□□□□□ -1.96
CLK1-204ENST00000432425 FAM20AQ96MK3 541 aa2.83□□□□□ -1.96
CLK1-204ENST00000432425 NKX3-1Q99801 234 aaPredicted RBP2.83□□□□□ -1.96
CLK1-204ENST00000432425 Q9N2K0 584 aa2.83□□□□□ -1.96
CLK1-204ENST00000432425 CHST11Q9NPF2 352 aa2.83□□□□□ -1.96
CLK1-204ENST00000432425 THEGQ9P2T0 379 aa2.83□□□□□ -1.96
CLK1-204ENST00000432425 PPIEQ9UNP9 301 aaKnown RBP2.83□□□□□ -1.96
CLK1-204ENST00000432425 IDH3BO43837 385 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 C22orf31O95567 290 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 VTNP04004 478 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 HSP90AA1P07900 732 aaKnown RBP2.82□□□□□ -1.96
CLK1-204ENST00000432425 DANCRP0C864 163 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 GATA2P23769 480 aaPredicted RBP2.82□□□□□ -1.96
CLK1-204ENST00000432425 MTHFRP42898 656 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 EIF5P55010 431 aaKnown RBP2.82□□□□□ -1.96
CLK1-204ENST00000432425 PSMC6P62333 389 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 UBXN2AP68543 259 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 BAATQ14032 418 aaPredicted RBP2.82□□□□□ -1.96
CLK1-204ENST00000432425 MEA1Q16626 185 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 PHKG1Q16816 387 aa2.82□□□□□ -1.96
CLK1-204ENST00000432425 MTHFSDQ2M296 383 aaKnown RBP2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms