RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 UTP11Q9Y3A2 253 aaKnown RBP9.44□□□□□ -0.9
HDAC6-207ENST00000430858 KLK4Q9Y5K2 254 aa9.44□□□□□ -0.9
HDAC6-207ENST00000430858 KRT87PA6NCN2 255 aa9.43□□□□□ -0.9
HDAC6-207ENST00000430858 EIF3HO15372 352 aaKnown RBP eCLIP9.43□□□□□ -0.92e-6■■■■□ 24.4
HDAC6-207ENST00000430858 CCNDBP1O95273 360 aa9.43□□□□□ -0.9
HDAC6-207ENST00000430858 SLC16A8O95907 504 aa9.43□□□□□ -0.9
HDAC6-207ENST00000430858 SYF2O95926 243 aaKnown RBP9.43□□□□□ -0.9
HDAC6-207ENST00000430858 FAM87AP0C7U9 286 aa9.43□□□□□ -0.9
HDAC6-207ENST00000430858 MCM3P25205 808 aa9.43□□□□□ -0.9
HDAC6-207ENST00000430858 PSMB5P28074 263 aa9.43□□□□□ -0.9
HDAC6-207ENST00000430858 CMPK1P30085 196 aa9.43□□□□□ -0.9
HDAC6-207ENST00000430858 RPA3P35244 121 aaPredicted RBP9.43□□□□□ -0.9
HDAC6-207ENST00000430858 GRIA3P42263 894 aa9.43□□□□□ -0.9
HDAC6-207ENST00000430858 PNLIPRP1P54315 467 aa9.43□□□□□ -0.9
HDAC6-207ENST00000430858 ARSFP54793 590 aa9.43□□□□□ -0.9
HDAC6-207ENST00000430858 POLE2P56282 527 aa9.43□□□□□ -0.9
HDAC6-207ENST00000430858 TIAL1Q01085 375 aaKnown RBP eCLIP9.43□□□□□ -0.9
HDAC6-207ENST00000430858 MGAT5Q09328 741 aa9.43□□□□□ -0.9
HDAC6-207ENST00000430858 ILF2Q12905 390 aaKnown RBP9.43□□□□□ -0.9
HDAC6-207ENST00000430858 FASTKD3Q14CZ7 662 aaKnown RBP9.43□□□□□ -0.9
HDAC6-207ENST00000430858 UGT8Q16880 541 aa9.43□□□□□ -0.9
HDAC6-207ENST00000430858 DEFB109BQ30KR1 87 aa9.43□□□□□ -0.9
HDAC6-207ENST00000430858 TCTE1Q5JU00 501 aa9.43□□□□□ -0.9
HDAC6-207ENST00000430858 ZNF385CQ66K41 422 aaPredicted RBP9.43□□□□□ -0.9
HDAC6-207ENST00000430858 DUPD1Q68J44 220 aa9.43□□□□□ -0.9
HDAC6-207ENST00000430858 FCRL6Q6DN72 434 aa9.43□□□□□ -0.9
HDAC6-207ENST00000430858 FAM45BPQ6NSW5 357 aa9.43□□□□□ -0.9
HDAC6-207ENST00000430858 PAQR3Q6TCH7 311 aa9.43□□□□□ -0.9
HDAC6-207ENST00000430858 UBE2R2Q712K3 238 aaPredicted RBP9.43□□□□□ -0.9
HDAC6-207ENST00000430858 PIWIL4Q7Z3Z4 852 aaKnown RBP9.43□□□□□ -0.9
HDAC6-207ENST00000430858 ANKMY2Q8IV38 441 aa9.43□□□□□ -0.9
HDAC6-207ENST00000430858 ZBED8Q8IZ13 594 aa9.43□□□□□ -0.9
HDAC6-207ENST00000430858 MYO1HQ8N1T3 1032 aa9.43□□□□□ -0.9
HDAC6-207ENST00000430858 ZNF655Q8N720 491 aaPredicted RBP9.43□□□□□ -0.9
HDAC6-207ENST00000430858 FAM45AQ8TCE6 357 aa9.43□□□□□ -0.9
HDAC6-207ENST00000430858 THAP4Q8WY91 577 aa9.43□□□□□ -0.9
HDAC6-207ENST00000430858 RUFY1Q96T51 708 aa9.43□□□□□ -0.9
HDAC6-207ENST00000430858 NDC1Q9BTX1 674 aa9.43□□□□□ -0.9
HDAC6-207ENST00000430858 DHRS4Q9BTZ2 278 aa9.43□□□□□ -0.9
HDAC6-207ENST00000430858 RAB17Q9H0T7 212 aa9.43□□□□□ -0.9
HDAC6-207ENST00000430858 DPH5Q9H2P9 285 aa9.43□□□□□ -0.9
HDAC6-207ENST00000430858 ENAMQ9NRM1 1142 aa9.43□□□□□ -0.9
HDAC6-207ENST00000430858 UTP6Q9NYH9 597 aaKnown RBP9.43□□□□□ -0.9
HDAC6-207ENST00000430858 MOCS1Q9NZB8 636 aa9.43□□□□□ -0.9
HDAC6-207ENST00000430858 ZFATQ9P243 1243 aa9.43□□□□□ -0.9
HDAC6-207ENST00000430858 ANKMY1Q9P2S6 941 aa9.43□□□□□ -0.9
HDAC6-207ENST00000430858 TUBD1Q9UJT1 453 aa9.43□□□□□ -0.9
HDAC6-207ENST00000430858 CDC14CA4D256 554 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 C9J4A7 227 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 E7ENX8 843 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 SLC16A5O15375 505 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 SRPX2O60687 465 aaPredicted RBP9.42□□□□□ -0.9
HDAC6-207ENST00000430858 C8GP07360 202 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 CD63P08962 238 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 CDKN2DP55273 166 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 IL2P60568 153 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 RPS18P62269 152 aaKnown RBP9.42□□□□□ -0.9
HDAC6-207ENST00000430858 DCDP81605 110 aaKnown RBP9.42□□□□□ -0.9
HDAC6-207ENST00000430858 CAV1Q03135 178 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 TAP2Q03519 686 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 PRDX1Q06830 199 aaKnown RBP9.42□□□□□ -0.9
HDAC6-207ENST00000430858 SP140Q13342 867 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 PDAP1Q13442 181 aaKnown RBP9.42□□□□□ -0.9
HDAC6-207ENST00000430858 NCF4Q15080 339 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 PTCHD3Q3KNS1 767 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 RBM20Q5T481 1227 aaKnown RBP9.42□□□□□ -0.9
HDAC6-207ENST00000430858 ATP1A1-AS1Q5TC04 95 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 HECTD2Q5U5R9 776 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 YOD1Q5VVQ6 348 aaPredicted RBP9.42□□□□□ -0.9
HDAC6-207ENST00000430858 LCN10Q6JVE6 187 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 FAM198BQ6UWH4 519 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 SUSD1Q6UWL2 747 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 SLC26A11Q86WA9 606 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 PALM2Q8IXS6 379 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 ENDOVQ8N8Q3 282 aaKnown RBP9.42□□□□□ -0.9
HDAC6-207ENST00000430858 GPATCH11Q8N954 259 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 MCOLN3Q8TDD5 553 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 PYROXD1Q8WU10 500 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 ZNF480Q8WV37 535 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 EEF1AKMT1Q8WVE0 214 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 DLG3Q92796 817 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 C16orf45Q96MC5 204 aaPredicted RBP9.42□□□□□ -0.9
HDAC6-207ENST00000430858 ZNF285Q96NJ3 590 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 GBP5Q96PP8 586 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 SELENOSQ9BQE4 189 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 ACAT2Q9BWD1 397 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 PHACTR1Q9C0D0 580 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 SLC25A18Q9H1K4 315 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 MRPS30Q9NP92 439 aaKnown RBP9.42□□□□□ -0.9
HDAC6-207ENST00000430858 TXLNGQ9NUQ3 528 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 NSMCE4AQ9NXX6 385 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 GRHL1Q9NZI5 618 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 SLC17A6Q9P2U8 582 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 CDC23Q9UJX2 597 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 TCFL5Q9UL49 500 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 SNX7Q9UNH6 387 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 PADI2Q9Y2J8 665 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 VWA7Q9Y334 891 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 KCNMB2Q9Y691 235 aa9.42□□□□□ -0.9
HDAC6-207ENST00000430858 ITPR1Q14643 2758 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms